FFCP PHASE1:Hg19::chr5:151055872..151055921,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11219 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-99bp_to_uc003luh.2_5end | |||
|cluster_id=chr5:151055872..151055921,- | |||
|coexpression_cluster_id=C254 | |||
|description=CAGE_peak_14_at_SPARC_5end | |||
|id=chr5:151055872..151055921,- | |||
|ontology_enrichment_celltype=CL:0002617!2.29e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002188;3.26e-11;5!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7!CL:1000413;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.94e-11,5;CL:1000746,2.03e-08,7;CL:1000612,2.03e-08,7;CL:1000413,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.76e-18;3!UBERON:0003353;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000310!6.48e-08!10;UBERON:0003127!2.52e-07!2;UBERON:0001443!3.70e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0003915;8.37e-07;9!UBERON:0004700;8.37e-07;9!UBERON:0001917;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.03e-08,7;UBERON:0000074,2.03e-08,7;UBERON:0001229,2.03e-08,7;UBERON:0001230,2.03e-08,7;UBERON:0003220,2.03e-08,7;UBERON:0005749,2.03e-08,7;UBERON:0004199,2.03e-08,7;UBERON:0004209,2.03e-08,7;UBERON:0004198,2.03e-08,7;UBERON:0003064,3.65e-08,28;UBERON:0005103,1.59e-07,8;UBERON:0000083,1.59e-07,8;UBERON:0009201,1.59e-07,8;UBERON:0006553,1.59e-07,8;UBERON:0003074,1.59e-07,8;UBERON:0003060,1.59e-07,8;UBERON:0000080,7.91e-07,9;UBERON:0002120,7.91e-07,9;UBERON:0004875,7.91e-07,9;UBERON:0005721,7.91e-07,9;UBERON:0005754,7.91e-07,9;UBERON:0007297,7.91e-07,9;UBERON:0003915,8.85e-07,9;UBERON:0004700,8.85e-07,9;UBERON:0001917,8.85e-07,9 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,1.37559020970034,0.417989933073621,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.234371591099,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0.684466602170562,0.134704106029175,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p14@SPARC | |||
}} |
Latest revision as of 10:28, 16 September 2015
Short description: | p14@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SPARC_5end |
Coexpression cluster: | C254_prostate_rhabdomyosarcoma_seminal_Fibroblast_transitionalcell_Smooth_Iris |
Association with transcript: | -99bp_to_uc003luh.2_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.94e-11 | 5 |
glomerular cell | 2.03e-08 | 7 |
kidney corpuscule cell | 2.03e-08 | 7 |
endothelial cell of artery | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.03e-08 | 7 |
renal glomerulus | 2.03e-08 | 7 |
renal corpuscle | 2.03e-08 | 7 |
glomerular capsule | 2.03e-08 | 7 |
metanephric mesenchyme | 2.03e-08 | 7 |
glomerular tuft | 2.03e-08 | 7 |
S-shaped body | 2.03e-08 | 7 |
renal vesicle | 2.03e-08 | 7 |
comma-shaped body | 2.03e-08 | 7 |
intermediate mesoderm | 3.65e-08 | 28 |
mesonephric epithelium | 1.59e-07 | 8 |
mesonephric tubule | 1.59e-07 | 8 |
nephric duct | 1.59e-07 | 8 |
renal duct | 1.59e-07 | 8 |
mesonephric duct | 1.59e-07 | 8 |
pronephric duct | 1.59e-07 | 8 |
mesonephros | 7.91e-07 | 9 |
pronephros | 7.91e-07 | 9 |
nephrogenic cord | 7.91e-07 | 9 |
pronephric mesoderm | 7.91e-07 | 9 |
rostral part of nephrogenic cord | 7.91e-07 | 9 |
presumptive pronephric mesoderm | 7.91e-07 | 9 |
endothelial tube | 8.85e-07 | 9 |
arterial system endothelium | 8.85e-07 | 9 |
endothelium of artery | 8.85e-07 | 9 |