FFCP PHASE1:Hg19::chrX:45626788..45626791,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:45626788..45626791,-
|short_description=p@chrX:45626788..45626791,-
|description=CAGE_peak_at_chrX:45626788..45626791,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:45626788..45626791,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chrX:45626788..45626791,- | |||
|id=chrX:45626788..45626791,- | |||
|ontology_enrichment_celltype=CL:0000738!9.32e-20!140;CL:0000037!4.11e-17!172;CL:0000566!4.11e-17!172;CL:0002031!5.41e-17!124;CL:0002032!3.61e-16!165;CL:0000837!3.61e-16!165;CL:0000988!1.55e-15!182;CL:0000766!1.89e-15!76;CL:0000557!3.08e-15!71;CL:0002057!2.74e-13!42;CL:0000763!3.76e-13!112;CL:0000049!3.76e-13!112;CL:0000839!9.69e-13!70;CL:0002087!3.55e-12!119;CL:0000860!4.17e-12!45;CL:0002009!2.52e-11!65;CL:0002194!2.40e-09!63;CL:0000576!2.40e-09!63;CL:0000040!2.40e-09!63;CL:0000559!2.40e-09!63;CL:0000623!3.01e-09!3;CL:0000825!3.01e-09!3;CL:0000767!3.62e-09!3;CL:0002274!1.27e-08!5;CL:0000457!1.27e-08!5;CL:0002191!1.27e-08!5;CL:0000097!1.27e-08!5;CL:0000831!1.27e-08!5;CL:0002028!1.27e-08!5;CL:0000134!1.48e-07!358;CL:0000034!3.00e-07!444;CL:0002320!3.58e-07!365;CL:0000048!7.19e-07!430;CL:0000219!9.93e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.15e-29;3!CL:0000097;1.43e-17;5!CL:0000624;9.57e-15;6!CL:0000767;3.51e-14;3!CL:0000791;4.09e-13;18!CL:0000789;4.09e-13;18!CL:0002419;4.09e-13;18!CL:0000037;8.61e-11;1!CL:0001024;8.61e-11;1!CL:0000163;5.12e-10;9!CL:0000084;2.08e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.63e-29,3;CL:0000825,1.63e-29,3;CL:0000097,1.18e-17,5;CL:0002028,1.18e-17,5;CL:0000738,1.55e-17,136;CL:0000037,1.33e-15,168;CL:0002031,2.59e-15,120;CL:0000624,8.52e-15,6;CL:0000988,1.13e-14,177;CL:0002032,2.03e-14,161;CL:0000837,2.03e-14,161;CL:0000767,3.88e-14,3;CL:0000791,4.15e-13,18;CL:0000789,4.15e-13,18;CL:0002420,4.15e-13,18;CL:0002419,4.15e-13,18;CL:0000790,4.15e-13,18;CL:0001024,6.77e-11,1;CL:0000838,8.85e-11,52;CL:0000542,1.48e-10,53;CL:0000051,1.48e-10,53;CL:0000163,4.60e-10,9;CL:0002087,5.97e-10,115;CL:0000766,2.09e-09,72;CL:0000084,2.10e-09,25;CL:0000827,2.10e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.09e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.63e-14!80;UBERON:0001474!1.04e-12!86;UBERON:0002390!1.32e-10!102;UBERON:0003061!1.32e-10!102;UBERON:0004765!7.49e-10!101;UBERON:0001434!7.49e-10!101;UBERON:0002193!4.56e-09!112;UBERON:0002405!6.83e-08!115;UBERON:0002204!7.39e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.20e-07,76 | |||
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| ||
|short_description=p@chrX:45626788..45626791,- | |||
}} | }} |
Latest revision as of 08:13, 1 August 2015
Short description: | p@chrX:45626788..45626791, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:45626788..45626791, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.63e-29 | 3 |
pro-NK cell | 1.63e-29 | 3 |
mast cell | 1.18e-17 | 5 |
basophil mast progenitor cell | 1.18e-17 | 5 |
leukocyte | 1.55e-17 | 136 |
hematopoietic stem cell | 1.33e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 2.59e-15 | 120 |
CD4-positive, alpha-beta T cell | 8.52e-15 | 6 |
hematopoietic cell | 1.13e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.03e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-14 | 161 |
basophil | 3.88e-14 | 3 |
mature alpha-beta T cell | 4.15e-13 | 18 |
alpha-beta T cell | 4.15e-13 | 18 |
immature T cell | 4.15e-13 | 18 |
mature T cell | 4.15e-13 | 18 |
immature alpha-beta T cell | 4.15e-13 | 18 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.77e-11 | 1 |
lymphoid lineage restricted progenitor cell | 8.85e-11 | 52 |
lymphocyte | 1.48e-10 | 53 |
common lymphoid progenitor | 1.48e-10 | 53 |
endocrine cell | 4.60e-10 | 9 |
nongranular leukocyte | 5.97e-10 | 115 |
myeloid leukocyte | 2.09e-09 | 72 |
T cell | 2.10e-09 | 25 |
pro-T cell | 2.10e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.20e-07 | 76 |