FFCP PHASE1:Hg19::chr6:86203923..86203945,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:86203923..86203945,+ | |||
|coexpression_cluster_id=C2870 | |||
|description=CAGE_peak_at_chr6:86203923..86203945,+ | |||
|id=chr6:86203923..86203945,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.84e-17!180;CL:0000144!2.53e-13!625;CL:0002371!5.65e-13!591;CL:0000548!3.06e-12!679;CL:0000004!3.06e-12!679;CL:0000255!3.06e-12!679;CL:0000012!7.07e-12!682;CL:0000057!1.23e-11!75;CL:0000359!1.94e-11!32;CL:0000222!1.21e-10!119;CL:0000680!1.16e-09!57;CL:0000056!1.16e-09!57;CL:0000355!1.16e-09!57;CL:0000220!1.30e-09!246;CL:0000192!1.51e-09!42;CL:0000514!1.51e-09!42;CL:0002321!2.57e-09!248;CL:0000003!4.49e-08!722;CL:0000187!6.59e-08!54;CL:0000393!1.50e-07!60;CL:0000211!1.50e-07!60;CL:0000183!6.41e-07!59;CL:0002539!6.76e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.69e-11;3!CL:0000388;1.69e-11;3!CL:0000515;5.69e-11;3!CL:0000134;3.28e-09;55!CL:0000723;2.27e-08;61!CL:0000056;2.49e-08;4!CL:0002595;4.08e-07;5!CL:0000048;4.78e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.09e-11,3;CL:0000388,1.09e-11,3;CL:0000515,1.36e-08,4;CL:0000048,1.74e-07,427;CL:0000723,3.10e-07,433;CL:0002595,4.85e-07,5;CL:0000034,6.50e-07,441;CL:0000499,9.88e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.33e-08;10!CL:0000515;2.49e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!4.35e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.50e-14;14!DOID:0060084;1.15e-11;3!DOID:127;1.15e-11;3!DOID:120;1.03e-10;27!DOID:193;7.77e-10;29!DOID:0060072;7.63e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-14,14;DOID:0060084,1.72e-11,3;DOID:127,1.72e-11,3;DOID:120,9.03e-11,27;DOID:193,6.86e-10,29;DOID:0060072,1.03e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!5.68e-14!42;UBERON:0003509!5.68e-14!42;UBERON:0004572!5.68e-14!42;UBERON:0000914!6.38e-13!83;UBERON:0002329!6.38e-13!83;UBERON:0003077!6.38e-13!83;UBERON:0003059!6.38e-13!83;UBERON:0007282!6.38e-13!83;UBERON:0009618!6.38e-13!83;UBERON:0007285!6.38e-13!83;UBERON:0001981!1.45e-11!60;UBERON:0007500!1.45e-11!60;UBERON:0004537!1.45e-11!60;UBERON:0006965!1.45e-11!60;UBERON:0000486!1.70e-11!82;UBERON:0002049!2.32e-11!79;UBERON:0007798!2.32e-11!79;UBERON:0000055!3.45e-11!69;UBERON:0004872!3.59e-11!84;UBERON:0004573!6.10e-10!33;UBERON:0004571!6.10e-10!33;UBERON:0005256!1.75e-09!143;UBERON:0004290!2.10e-09!70;UBERON:0004535!5.41e-09!110;UBERON:0003102!1.04e-08!95;UBERON:0000947!1.54e-08!21;UBERON:0010191!1.54e-08!21;UBERON:0001009!2.45e-08!113;UBERON:0001134!2.63e-08!61;UBERON:0002036!2.63e-08!61;UBERON:0003082!2.63e-08!61;UBERON:0003914!4.10e-08!118;UBERON:0002385!1.04e-07!63;UBERON:0001015!1.04e-07!63;UBERON:0000383!1.04e-07!63;UBERON:0000490!4.57e-07!138;UBERON:0004237!6.76e-07!10;UBERON:0004695!6.76e-07!10;UBERON:0002111!6.76e-07!10;UBERON:0004178!6.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.69e-11;3!UBERON:0000043;1.69e-11;3!UBERON:0007845;1.69e-11;3!UBERON:0002204;8.76e-08;70!UBERON:0003834;4.08e-07;5!UBERON:0001533;4.08e-07;5!UBERON:0003134;4.84e-07;33!UBERON:0002118;9.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-11,3;UBERON:0000043,1.09e-11,3;UBERON:0007845,1.09e-11,3;UBERON:0000486,3.41e-09,83;UBERON:0007524,2.89e-08,73;UBERON:0002329,1.73e-07,71;UBERON:0003059,1.73e-07,71;UBERON:0007282,1.73e-07,71;UBERON:0004290,1.73e-07,71;UBERON:0009618,1.73e-07,71;UBERON:0003134,2.10e-07,37;UBERON:0000474,2.10e-07,37;UBERON:0003077,2.44e-07,72;UBERON:0007285,2.44e-07,72;UBERON:0003834,4.85e-07,5;UBERON:0001533,4.85e-07,5 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,1.0007329835313,0,1.74467704820074,0,0,1.04474251279935,0,0,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,0.672325146451775,0.602694528023977,2.19093027116212,1.95173119516203,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0.50133791063589,1.15877215168659,0,0.486634870302636,0.378139268656271,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0,0,0.402829317109147,1.52054421143703,0.976248230192678,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.633152558322899,0.264818361626438,1.14734648299525,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,1.5608003841516,0,1.34503812496621,0.352303495931295,0.485618833104395,0,0.816616685019573,0.982674538494144,0.309977343527296,0,0.741800787835671,0,0,0.841680569770331,0.625592599359821,0.277064115484183,0,2.14541457059314,0.600952235626387,0.340296549480063,0.179389635688862,0.213557388818567,0.211931901159562,2.40072876867522,0.103052529238439,0.772921620136887,0.558350568994769,0.675105328965065,0,0,0.276149695926898,0.646584227275248,0.710019185033229,0.403008392910561,0.339121184620975,0.966304265816484,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,2.57296375277154,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0,0,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,1.00789276919316,0.567100388969546,0.806026704325635,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.66004457238855,0.904902010304444,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,2.60606352001643,1.43833425785268,1.96967059563885,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,1.08506009479894,0.207970861530807,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,0,0,1.99267679560631,0,0.868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0.462629081407967,1.59805552781814,0.410635780069046,0.519254429183621,1.16210378459959,0,0,0.276242966807689,0.114814448164607,0.364182336013434,0.262248829918848,0,0.462092022626489,0,0,0.527758144464379,0,0.170093705276516,0.431831832204279,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0,0,0.426133137080504,0,0.165284915360978,0.192190067365106,0.382838137483752,0.10115778085555,0.464845549297286,1.88887408098384,1.3940745403212,0.616067160352178,0.532306030317022,0,0.9266210955196,0.715624433709956,0.372158369359667,0.316379424718726,0.38126038784765,0,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,3.1682753652067,0,0.682499557039929,0,1.13008116620243,0,1.32687795048244,3.06915619677634,0,0,0.811641507850816,0.30982349809975,0.281695602532241,0.573645408816206,0,0.35667105148125,0,2.53329162357197,1.97576935775941,0,0,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,2.17727711363265,0.359473404589307,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.307801034015188,0,0,0,0,0.957003479195758,1.74035427463538,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.970722711091971,0.173559738335131,0,0,0,0.687944129886466,0,0,0,0,0,0,0,0.596143835108969,0,0,0.561111741760736,0,0,0,0,0,3.31326035372744,0.248505071130865,0,0.135904206073614,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,1.08599920350743,3.45688596480507,4.89881040164114,0,0,0.170388021785422,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.597019211547496,0,0,1.32582103692562,1.50940741051545,0.889811221596536,0.228840068396924,0.604923695052956,0.777186002913902,1.03498604992744,0.955780602982214,1.79921244865442,0.776314784381297,2.07353103920428,1.59505028734797,1.5652351854352,0.601030435988874,2.28483127301277,1.22061219961398,1.27294061441792,0.644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| |||
|short_description=p@chr6:86203923..86203945,+ | |||
}} |
Latest revision as of 03:37, 31 July 2015
Short description: | p@chr6:86203923..86203945, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:86203923..86203945, + |
Coexpression cluster: | C2870_Smooth_leiomyoma_giant_Synoviocyte_Urothelial_Myoblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.09e-11 | 3 |
tendon cell | 1.09e-11 | 3 |
skeletal muscle myoblast | 1.36e-08 | 4 |
multi fate stem cell | 1.74e-07 | 427 |
somatic stem cell | 3.10e-07 | 433 |
smooth muscle cell of the subclavian artery | 4.85e-07 | 5 |
stem cell | 6.50e-07 | 441 |
stromal cell | 9.88e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.09e-11 | 3 |
tendon | 1.09e-11 | 3 |
regular connective tissue | 1.09e-11 | 3 |
multilaminar epithelium | 3.41e-09 | 83 |
dense mesenchyme tissue | 2.89e-08 | 73 |
somite | 1.73e-07 | 71 |
presomitic mesoderm | 1.73e-07 | 71 |
presumptive segmental plate | 1.73e-07 | 71 |
dermomyotome | 1.73e-07 | 71 |
trunk paraxial mesoderm | 1.73e-07 | 71 |
female reproductive organ | 2.10e-07 | 37 |
female reproductive system | 2.10e-07 | 37 |
paraxial mesoderm | 2.44e-07 | 72 |
presumptive paraxial mesoderm | 2.44e-07 | 72 |
thoracic segment blood vessel | 4.85e-07 | 5 |
subclavian artery | 4.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-14 | 14 |
cell type benign neoplasm | 1.72e-11 | 3 |
leiomyoma | 1.72e-11 | 3 |
female reproductive organ cancer | 9.03e-11 | 27 |
reproductive organ cancer | 6.86e-10 | 29 |
benign neoplasm | 1.03e-08 | 4 |