FFCP PHASE1:Mm9::chr2:163820971..163820982,+: Difference between revisions
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{{FFCP|EntrezGene=54401|HGNC=|UniProt=A2A5N2,Q9CQV8|association_with_transcript=38bp_to_NM_018753,uc008ntp.1_5end|description=CAGE_peak_3_at_Ywhab_5end|id=chr2:163820971..163820982,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.04e-10!75;UBERON:0001016!3.04e-10!75;UBERON:0001017!5.25e-10!73;UBERON:0005743!5.25e-10!73;UBERON:0004121!8.34e-10!102;UBERON:0000924!8.34e-10!102;UBERON:0006601!8.34e-10!102;UBERON:0001049!1.03e-08!52;UBERON:0005068!1.03e-08!52;UBERON:0006241!1.03e-08!52;UBERON:0007135!1.03e-08!52;UBERON:0000955!6.99e-08!50;UBERON:0006238!6.99e-08!50;UBERON:0002020!1.13e-07!34;UBERON:0002616!1.16e-07!49;UBERON:0002346!1.35e-07!71;UBERON:0003075!1.35e-07!71;UBERON:0007284!1.35e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.26e-10,75;UBERON:0004121,4.89e-10,95;UBERON:0000924,4.89e-10,95;UBERON:0006601,4.89e-10,95;UBERON:0001017,5.65e-10,73;UBERON:0000073,8.69e-10,54;UBERON:0010371,3.17e-09,73;UBERON:0001049,9.28e-09,52;UBERON:0005068,9.28e-09,52;UBERON:0006241,9.28e-09,52;UBERON:0007135,9.28e-09,52;UBERON:0002346,5.62e-08,64;UBERON:0003075,5.62e-08,64;UBERON:0007284,5.62e-08,64;UBERON:0002020,1.20e-07,34|phase1_expression=1.76163731815273,2.09385244583617,3.18499467572675,1.81478526784098,3.50627010962443,1.84667199103079,3.73780224952841,0.774739940649458,3.66050677594334,7.95819389494778,0.68487187290202,0.717949430958028,0.684802919724823,1.39872643870396,1.33243904726265,0.809901069559304,0.699561878128147,1.26184866143295,0.822686601634433,0.84877930359606,1.7008658030214,1.58865521921416,1.04479915655574,3.51983330145495,3.67054849707472,1.14846392823004,3.01533397311352,3.878482188346,3.99049180858385,2.26827116783938,3.32595765982957,0,1.84519436275371,0,1.1554064790051,1.49611180822643,1.22501613757421,5.85944283031671,3.906676722619,6.28228492768558,6.47054636834116,10.2456822743767,6.79714494243615,1.25896817975577,0.912392380975631,0.734187008646726,0,2.18025156380447,1.09843091367236,1.1665793944457,0.979904951377538,2.87505128729943,2.85230430298152,2.90144856804538,3.02484419228218,4.3734104126111,0.85960031981627,3.09403255366465,1.82084814773638,2.64495489636016,4.43681982454325,0.338844532069132,0,1.7997994345628,0.988866362566974,2.1314403448383,1.79760066311043,0.768436610643109,0.933206510776299,1.62007125998029,0.630974884054146,4.85606673486466,6.18431914664518,1.5923803897944,2.30029130443767,4.5960939330501,5.50579404996943,9.95961237064464,8.1411462625809,2.63772575460388,3.84248103130121,4.16730696445408,8.93385596804419,7.31591393041184,6.1119299110724,5.30331453852602,6.83384067835694,4.28718725398191,1.8931548333296,4.38315048619356,5.79728977403356,2.58127163094416,3.39985666853875,0.539703191637817,0.649776417447669,1.34408066129201,2.38755514223978,1.53387290320252,3.11743205523443,2.47337702157238,1.69012103732017,3.84979432242953,0,0,4.32982082022428,2.53359865475099,5.56076889516262,2.05530983494308,3.10725460376606,1.7813056687779,1.90833859442749,1.52232739156071,1.61430848079241,2.26083960828934,3.99801604261396,2.76466500925286,1.97755974187499,3.61498392299779,1.76922110389975,1.94120219936891,1.98757366614354,1.45462575940567,3.72783522436244,2.92780797011547,3.56059401582874,0.766371165625774,4.55297473122497,2.99951365496704,3.17675567682662,7.78911324905078,4.57500602818627,1.50785222535437,7.47444576826789,4.85859368927628,6.64921742590592,7.30085683804909,1.52759045775474,4.10543003013307,2.27450482590307,1.47309299120532,1.95180664444056,2.75882525320168,2.70093194708024,1.65775299619287,1.56483948048054,1.66547836370305,1.68663104207512,2.84573707812917,2.15567992932842,2.64748512234947,1.23165786914764,1.53437012699302,0.834141747676794,2.78601733217733,1.85203922767149,1.39323986772945,2.80885274925294,5.1469581422943,3.40996199274711,4.55676699578104,2.34526059981096,3.06105504483725,2.60419209143731,2.55793501271625,1.3884040159864,1.39520366850245,1.60964040839772,1.28441876603886,0.822799249567402,0.985004784474571,1.21603214318784,1.31579988682799,0.878200461164203,1.07365135008297,7.99101804543684,3.2929475961371,2.64335026387038,2.11560453330835,1.70630600428187,2.55460339046482,1.15980715189884,2.01683524623343,2.2237804384487,1.52180500890047,1.42358718463353,1.97638745668813,0.754005626400808,2.58643413653496,0.779856348476481,1.79763881730844,3.24207074812041,2.38969527905241,4.36236172192088,2.39921876480431,3.38123207019241,1.83286195060783,1.16371492300575,2.38461787627083,1.70738650235495,0.885660887877613,1.41298855057237,1.72756029490521,2.37162101669719,2.16898637430922,1.37591296579242,2.02375901146368,1.01430060694251,1.68824011826692,1.01850340712568,1.43848068725405,1.62135226775035,1.09824565275233,0,1.86070473834252,1.24815069245824,0.252578877947112,0.538192240565737,1.92977408545347,3.69506380333209,3.41084541186873,2.60743962307241,1.52770577197669,1.40814148973101,1.67506257441816,1.9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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54401 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2A5N2,Q9CQV8 | |||
|association_with_transcript=38bp_to_NM_018753,uc008ntp.1_5end | |||
|cluster_id=chr2:163820971..163820982,+ | |||
|description=CAGE_peak_3_at_Ywhab_5end | |||
|id=chr2:163820971..163820982,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.04e-10!75;UBERON:0001016!3.04e-10!75;UBERON:0001017!5.25e-10!73;UBERON:0005743!5.25e-10!73;UBERON:0004121!8.34e-10!102;UBERON:0000924!8.34e-10!102;UBERON:0006601!8.34e-10!102;UBERON:0001049!1.03e-08!52;UBERON:0005068!1.03e-08!52;UBERON:0006241!1.03e-08!52;UBERON:0007135!1.03e-08!52;UBERON:0000955!6.99e-08!50;UBERON:0006238!6.99e-08!50;UBERON:0002020!1.13e-07!34;UBERON:0002616!1.16e-07!49;UBERON:0002346!1.35e-07!71;UBERON:0003075!1.35e-07!71;UBERON:0007284!1.35e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.26e-10,75;UBERON:0004121,4.89e-10,95;UBERON:0000924,4.89e-10,95;UBERON:0006601,4.89e-10,95;UBERON:0001017,5.65e-10,73;UBERON:0000073,8.69e-10,54;UBERON:0010371,3.17e-09,73;UBERON:0001049,9.28e-09,52;UBERON:0005068,9.28e-09,52;UBERON:0006241,9.28e-09,52;UBERON:0007135,9.28e-09,52;UBERON:0002346,5.62e-08,64;UBERON:0003075,5.62e-08,64;UBERON:0007284,5.62e-08,64;UBERON:0002020,1.20e-07,34 | |||
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| |||
|short_description=p3@Ywhab | |||
}} |
Latest revision as of 02:20, 26 September 2015
Short description: | p3@Ywhab |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ywhab_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_NM_018753, uc008ntp.1_5end |
EntrezGene: | Ywhab |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 3.26e-10 | 75 |
ectoderm-derived structure | 4.89e-10 | 95 |
ectoderm | 4.89e-10 | 95 |
presumptive ectoderm | 4.89e-10 | 95 |
central nervous system | 5.65e-10 | 73 |
regional part of nervous system | 8.69e-10 | 54 |
ecto-epithelium | 3.17e-09 | 73 |
neural tube | 9.28e-09 | 52 |
neural rod | 9.28e-09 | 52 |
future spinal cord | 9.28e-09 | 52 |
neural keel | 9.28e-09 | 52 |
neurectoderm | 5.62e-08 | 64 |
neural plate | 5.62e-08 | 64 |
presumptive neural plate | 5.62e-08 | 64 |
gray matter | 1.20e-07 | 34 |