FFCP PHASE1:Hg19::chr7:131195762..131195773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9171 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-105bp_to_ENST00000482581_5end | |||
|cluster_id=chr7:131195762..131195773,- | |||
|coexpression_cluster_id=C957 | |||
|description=CAGE_peak_10_at_PODXL_5end | |||
|id=chr7:131195762..131195773,- | |||
|ontology_enrichment_celltype=CL:0002139!9.27e-09!24;CL:0002322!4.37e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.40e-23;5!CL:0000540;4.13e-11;6!CL:0000404;4.13e-11;6!CL:0002581;3.44e-08;1!CL:0002379;3.44e-08;1!CL:0002321;8.62e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.82e-23,5;CL:0000047,2.06e-14,8;CL:0000540,2.22e-11,6;CL:0000031,2.22e-11,6;CL:0000404,2.22e-11,6;CL:0002379,2.69e-08,1;CL:0002581,3.33e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;4.13e-11;6!UBERON:0005754;3.44e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.44e-08;1!DOID:3565;3.44e-08;1!DOID:4235;3.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.69e-08,1;DOID:3565,2.69e-08,1;DOID:4235,7.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!7.82e-12!86;UBERON:0001017!1.19e-10!82;UBERON:0000073!5.77e-10!94;UBERON:0001016!5.77e-10!94;UBERON:0007023!3.84e-09!115;UBERON:0001049!8.85e-09!57;UBERON:0005068!8.85e-09!57;UBERON:0006241!8.85e-09!57;UBERON:0007135!8.85e-09!57;UBERON:0000955!1.26e-08!69;UBERON:0006238!1.26e-08!69;UBERON:0002780!2.23e-08!41;UBERON:0001890!2.23e-08!41;UBERON:0006240!2.23e-08!41;UBERON:0002616!3.51e-08!59;UBERON:0003080!5.18e-08!42;UBERON:0002020!1.66e-07!34;UBERON:0003528!1.66e-07!34;UBERON:0003135!1.70e-07!11;UBERON:0000956!7.15e-07!25;UBERON:0000203!7.15e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;3.44e-08;1!UBERON:0006868;3.44e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,4.11e-08,1;UBERON:0006868,4.11e-08,1;UBERON:0000080,2.14e-07,9;UBERON:0002120,2.14e-07,9;UBERON:0004875,2.14e-07,9;UBERON:0005721,2.14e-07,9;UBERON:0005754,2.14e-07,9;UBERON:0007297,2.14e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0,0.838998872419812,0.825354125820202,0.417989933073621,0,0.35576626268671,0.66944122552934,0.805658634218294,0,1.70843440283719,0,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51145489964407,0.213557388818567,0,0.300091096084402,0,0.772921620136887,0,0.843881661206331,0.389748020644795,1.7670364197088,0,0.161646056818812,0.355009592516614,0.906768884048762,0,0,0,0,3.78118489001746,2.51806559810822,2.5562667431294,0.829288440122964,1.7662459561294,0.36497735907583,0,0,0,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,1.87103075804167,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,1.21390189767046,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0.17472666824203,0,0.387025325156341,0.365446585430928,0.821154570532092,0,0,0.451961481561065,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0,0,0.343189995723929,0.14405479798815,0,0,0.271808412147228,0.836822770498666,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,1.76828463311521,1.78801267576404,5.81616473240859,0,0,0,0,0.472834243795189,0.472091293214983,0,0,0,0,0,0.25426853765475,0,4.32110745600634,0.653174720218818,0,0.082092520749339,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0.533937062838473,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0.573409195690071,0.221858103073705,0.18628920882415,0.138348634936231,0,0,0,1.6468607378872,0,0.144921028610825,0,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0,0,0,0.398095888698616,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0,1.13352962756136,0,0.489473409012935,0.179088841081487,0.617602894321944,0,0.353378291891762,0,1.68942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0.0675375846183947,0,0.620060389503552,0,0.546974809018219,0,0.992422356778588,0,0,1.60710550763486,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0.235479278551542,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,1.27016115057279,0.22910686854405,0.93061915699296,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0.490296643507811,0,0,0,0,1.0195626881269,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,3.15416062087697,1.20192129160065,0.126698501011437,0.203977659483963,0.534434810531121,0.275684698604535,1.50424523575425,0.0757786982182394,0.267964130156178,0.829169439458779,0.103432995861895,0,0.23806443146374,0,0,0.224263725161227,0.12729431655633,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |||
|short_description=p10@PODXL | |||
}} |
Latest revision as of 10:04, 16 September 2015
Short description: | p10@PODXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PODXL_5end |
Coexpression cluster: | C957_iPS_Fibroblast_teratocarcinoma_mesenchymal_H9_leiomyoma_testicular |
Association with transcript: | -105bp_to_ENST00000482581_5end |
EntrezGene: | PODXL |
HGNC: | 9171 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.82e-23 | 5 |
neuronal stem cell | 2.06e-14 | 8 |
neuron | 2.22e-11 | 6 |
neuroblast | 2.22e-11 | 6 |
electrically signaling cell | 2.22e-11 | 6 |
meningothelial cell | 2.69e-08 | 1 |
perirenal preadipocyte | 3.33e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 4.11e-08 | 1 |
seminal fluid secreting gland | 4.11e-08 | 1 |
mesonephros | 2.14e-07 | 9 |
pronephros | 2.14e-07 | 9 |
nephrogenic cord | 2.14e-07 | 9 |
pronephric mesoderm | 2.14e-07 | 9 |
rostral part of nephrogenic cord | 2.14e-07 | 9 |
presumptive pronephric mesoderm | 2.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.69e-08 | 1 |
meningioma | 2.69e-08 | 1 |
spindle cell sarcoma | 7.16e-08 | 1 |