FFCP PHASE1:Hg19::chr8:21915368..21915380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |||
|TSSclassifier=strong | |||
|UniProt=Q08495,E9PD40 | |||
|association_with_transcript=0bp_to_ENST00000265800,ENST00000381455,NM_001114135,uc011kyu.1_5end | |||
|cluster_id=chr8:21915368..21915380,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_19_at_EPB49_5end | |||
|id=chr8:21915368..21915380,+ | |||
|ontology_enrichment_celltype=CL:0000764!9.47e-07!2;CL:0000765!9.47e-07!2;CL:0000050!9.47e-07!2;CL:0000038!9.47e-07!2;CL:0000558!9.47e-07!2;CL:0000547!9.47e-07!2;CL:0000549!9.47e-07!2;CL:0000550!9.47e-07!2;CL:0000552!9.47e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.04e-14;2!CL:0000558;1.04e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.04e-14,2;CL:0000765,1.04e-14,2;CL:0000050,1.04e-14,2;CL:0000038,1.04e-14,2;CL:0000558,1.04e-14,2;CL:0000547,1.04e-14,2;CL:0000549,1.04e-14,2;CL:0000550,1.04e-14,2;CL:0000552,1.04e-14,2;CL:0000763,9.97e-07,108;CL:0000049,9.97e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.39e-12!8;DOID:8692!1.44e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.68e-29;8!DOID:8692;1.25e-19;31!DOID:1240;2.51e-12;39!DOID:8552;3.70e-08;1!DOID:2531;1.57e-07;51!DOID:0060083;1.57e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.28e-29,8;DOID:8692,3.80e-20,31;DOID:1240,1.16e-15,39;DOID:2531,1.42e-11,51;DOID:0060083,1.42e-11,51;DOID:8552,4.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.35e-40!115;UBERON:0001049!1.12e-23!57;UBERON:0005068!1.12e-23!57;UBERON:0006241!1.12e-23!57;UBERON:0007135!1.12e-23!57;UBERON:0002616!8.20e-21!59;UBERON:0003075!1.27e-18!86;UBERON:0007284!1.27e-18!86;UBERON:0005743!2.39e-18!86;UBERON:0001017!3.26e-18!82;UBERON:0000955!4.68e-18!69;UBERON:0006238!4.68e-18!69;UBERON:0002346!1.93e-17!90;UBERON:0000073!3.45e-17!94;UBERON:0001016!3.45e-17!94;UBERON:0001893!1.14e-16!34;UBERON:0002780!1.20e-16!41;UBERON:0001890!1.20e-16!41;UBERON:0006240!1.20e-16!41;UBERON:0003080!3.82e-16!42;UBERON:0002619!5.40e-16!22;UBERON:0001869!6.51e-16!32;UBERON:0001950!3.54e-15!20;UBERON:0002791!3.82e-15!33;UBERON:0002020!1.24e-14!34;UBERON:0003528!1.24e-14!34;UBERON:0000178!6.25e-14!15;UBERON:0000179!6.25e-14!15;UBERON:0000463!6.25e-14!15;UBERON:0000956!8.93e-14!25;UBERON:0000203!8.93e-14!25;UBERON:0003056!7.28e-11!61;UBERON:0000200!1.05e-10!6;UBERON:0000153!6.65e-09!129;UBERON:0007811!6.65e-09!129;UBERON:0000033!6.90e-09!123;UBERON:0003076!6.98e-09!15;UBERON:0003057!6.98e-09!15;UBERON:0004733!7.63e-09!12;UBERON:0002028!7.63e-09!12;UBERON:0007277!7.63e-09!12;UBERON:0002771!2.12e-08!3;UBERON:0004121!3.12e-08!169;UBERON:0004732!4.38e-08!13;UBERON:0001871!6.73e-08!7;UBERON:0000924!7.30e-08!173;UBERON:0006601!7.30e-08!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.60e-35;15!UBERON:0000179;1.60e-35;15!UBERON:0000463;1.60e-35;15!UBERON:0002390;3.25e-18;32!UBERON:0002193;3.30e-09;42!UBERON:0002581;8.69e-08;1!UBERON:0002022;8.69e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.33e-35,15;UBERON:0000179,1.33e-35,15;UBERON:0000463,1.33e-35,15;UBERON:0007023,1.54e-13,114;UBERON:0002022,1.06e-07,1;UBERON:0002581,1.21e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38519753291869,3.39866086332371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58192370155386,10.7049208999933,3.41788312304498,1.42939065274673,2.87953591160336,4.53931317834902,10.8006287447623,11.1037524681198,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,5.01131113011436,7.38524393686274,7.30230331885154,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.110579259931225,0.295547618953547,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,3.15802195610297,2.03036094555463,1.9606253431774,1.67821586975843,2.08729105996604,3.33766815858795,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,1.27574068981852,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,6.64949418069646,0,0,0,2.65013777824443,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,1.5041393641362,0.919036730290385,0.327872630709804,0,0,0.610131324509816,0.751145584238999,0,0.110929051536852,0.18628920882415,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.963438376446893,0,0,0.41023272848151,0,0.96820153449905,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,0.620060389503552,0.887821342714695,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.543757863814654,1.05236437700559,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,1.35361564744512,0,0,0,0,0,0,0,0,1.63179576458195,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |||
|short_description=p19@EPB49 | |||
}} |
Latest revision as of 09:49, 17 September 2015
Short description: | p19@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_EPB49_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000265800, ENST00000381455, NM_001114135, uc011kyu.1_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | Q08495E9PD40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.04e-14 | 2 |
erythroblast | 1.04e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.04e-14 | 2 |
erythroid progenitor cell | 1.04e-14 | 2 |
reticulocyte | 1.04e-14 | 2 |
proerythroblast | 1.04e-14 | 2 |
basophilic erythroblast | 1.04e-14 | 2 |
polychromatophilic erythroblast | 1.04e-14 | 2 |
orthochromatic erythroblast | 1.04e-14 | 2 |
myeloid cell | 9.97e-07 | 108 |
common myeloid progenitor | 9.97e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.33e-35 | 15 |
haemolymphatic fluid | 1.33e-35 | 15 |
organism substance | 1.33e-35 | 15 |
adult organism | 1.54e-13 | 114 |
insula | 1.06e-07 | 1 |
postcentral gyrus | 1.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.28e-29 | 8 |
myeloid leukemia | 3.80e-20 | 31 |
leukemia | 1.16e-15 | 39 |
hematologic cancer | 1.42e-11 | 51 |
immune system cancer | 1.42e-11 | 51 |
chronic myeloid leukemia | 4.11e-08 | 1 |