FFCP PHASE1:Hg19::chr8:37654369..37654415,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17849 | |||
|TSSclassifier=strong | |||
|UniProt=F5GY26,Q6YN44,Q96PE1 | |||
|association_with_transcript=0bp_to_ENST00000416514,NM_032777_5end | |||
|cluster_id=chr8:37654369..37654415,+ | |||
|coexpression_cluster_id=C4749 | |||
|description=CAGE_peak_1_at_GPR124_5end | |||
|id=chr8:37654369..37654415,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-31!180;CL:0000057!2.57e-19!75;CL:0000183!1.67e-12!59;CL:0000187!2.00e-11!54;CL:0000680!3.54e-11!57;CL:0000056!3.54e-11!57;CL:0000355!3.54e-11!57;CL:0000393!2.38e-09!60;CL:0000211!2.38e-09!60;CL:0000192!3.25e-09!42;CL:0000514!3.25e-09!42;CL:0000222!5.71e-08!119;CL:0002620!8.98e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000057;8.22e-09;73!CL:0002620;4.99e-08;23!CL:0000192;2.87e-07;43!CL:0000187;2.90e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.53e-20,76;CL:0000187,3.44e-12,55;CL:0000680,6.37e-12,58;CL:0000056,6.37e-12,58;CL:0000355,6.37e-12,58;CL:0000192,6.32e-10,43;CL:0000514,6.32e-10,43;CL:0000393,6.91e-10,61;CL:0000211,6.91e-10,61;CL:0000222,2.42e-08,121;CL:0002620,5.05e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;2.87e-07;43!CL:0000355;6.67e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.19e-14!659;UBERON:0000914!1.22e-13!83;UBERON:0002329!1.22e-13!83;UBERON:0003077!1.22e-13!83;UBERON:0003059!1.22e-13!83;UBERON:0007282!1.22e-13!83;UBERON:0009618!1.22e-13!83;UBERON:0007285!1.22e-13!83;UBERON:0004290!1.12e-12!70;UBERON:0002049!2.30e-12!79;UBERON:0007798!2.30e-12!79;UBERON:0004872!2.68e-12!84;UBERON:0002385!5.69e-12!63;UBERON:0001015!5.69e-12!63;UBERON:0000383!5.69e-12!63;UBERON:0001134!1.88e-11!61;UBERON:0002036!1.88e-11!61;UBERON:0003082!1.88e-11!61;UBERON:0001009!4.48e-11!113;UBERON:0004535!5.27e-11!110;UBERON:0005256!2.68e-10!143;UBERON:0000486!3.17e-10!82;UBERON:0000475!3.70e-10!365;UBERON:0000055!8.64e-10!69;UBERON:0000467!4.45e-09!625;UBERON:0000480!4.94e-09!626;UBERON:0001981!7.18e-09!60;UBERON:0007500!7.18e-09!60;UBERON:0004537!7.18e-09!60;UBERON:0006965!7.18e-09!60;UBERON:0000490!1.57e-07!138;UBERON:0003914!2.81e-07!118;UBERON:0000922!3.87e-07!612;UBERON:0002050!8.70e-07!605;UBERON:0005423!8.70e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.50e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.00e-14,78;UBERON:0007524,8.31e-14,73;UBERON:0002329,1.90e-13,71;UBERON:0003059,1.90e-13,71;UBERON:0007282,1.90e-13,71;UBERON:0004290,1.90e-13,71;UBERON:0009618,1.90e-13,71;UBERON:0003077,2.67e-13,72;UBERON:0007285,2.67e-13,72;UBERON:0002385,9.88e-13,64;UBERON:0001015,9.88e-13,64;UBERON:0000383,9.88e-13,64;UBERON:0001134,3.39e-12,62;UBERON:0002036,3.39e-12,62;UBERON:0003082,3.39e-12,62;UBERON:0002049,3.97e-12,78;UBERON:0007798,3.97e-12,78;UBERON:0004872,4.85e-12,83;UBERON:0005256,1.70e-11,122;UBERON:0003104,6.53e-11,160;UBERON:0009142,6.53e-11,160;UBERON:0000486,7.19e-11,83;UBERON:0001009,1.55e-10,112;UBERON:0004535,1.84e-10,109;UBERON:0000055,1.59e-09,68;UBERON:0000479,4.73e-09,773;UBERON:0000490,5.67e-09,148;UBERON:0000926,5.89e-09,315;UBERON:0004120,5.89e-09,315;UBERON:0006603,5.89e-09,315;UBERON:0007500,1.38e-08,59;UBERON:0001981,1.38e-08,59;UBERON:0004537,1.38e-08,59;UBERON:0006965,1.38e-08,59;UBERON:0003914,4.18e-07,117;UBERON:0000119,6.02e-07,309 | |||
|phase1_expression=25.4349730978779,25.263861819136,27.3451543946184,18.0131937035635,53.6353313312745,22.6808016266096,22.796989035148,14.5295570888171,48.3193412169701,5.6518805395347,4.18680700783456,1.31064823278103,1.84636884759917,17.8223548262467,15.90707403494,21.5144046864568,12.0538905604795,23.3699228923959,17.5655807564582,2.83178433576612,9.18003110599138,6.26909442956176,1.43117993565528,0.958120975510189,6.77930253811935,0,0.0821005894499457,0,1.57345710739562,2.30297638858328,4.18003532953405,0,0,0,0,0,0.587200878669695,6.09394949385065,1.80490002723128,7.16135873362311,0,0,0,1.45398238779565,2.26725566213286,0.485168122375632,2.55671940596253,0.411167888021826,1.23882548358041,2.58923153089935,1.7931249457037,0.236482229888585,5.5159308917859,3.22742341791913,1.35426486594342,1.88242339542605,0.818718450173537,0.674170453335254,3.36692281607993,0.641858054152187,1.27867425159808,2.63881040149373,2.19410023383795,1.70489900213078,2.32167390902867,3.97169657283798,1.86846674698672,4.52247597462138,3.12889751052121,1.73751075764093,6.05399502633369,0.368277635987565,0.316462387440884,3.16882929467913,2.97646019951061,0,6.73971786878971,6.00707571366025,2.57160938715328,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.493313713811028,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,39.0090986102339,20.7917266508127,30.5591522806037,15.9033227049209,15.5414752297126,11.1531819599834,3.9764297352555,26.2782829963423,6.52290238432068,8.42571710357743,6.67544371267758,13.8182924650087,0,0,1.29818957461873,0.696518949197069,0.664789802594326,0.238490624305342,0,0,4.37277296206751,6.881876760849,13.8856200643038,8.47961912886015,11.7459842138774,15.9568464325239,7.9418087283988,7.75250277507987,3.20189636418039,7.69857409358742,14.9046847330384,6.0821768457481,41.4905497831888,8.82391392830085,19.4434067491622,8.21557500213534,14.594409220701,10.0224217630157,6.13266549863533,8.54339093611316,13.5569290508501,0,0,0,72.0609329958212,28.4918651245304,13.3733272621351,55.3594678045211,26.6001286648768,25.2304920064038,44.8345782064761,28.1201005195562,19.6062952301853,21.0148648428713,16.8365760206862,50.856095688697,50.1273054297599,54.128250753607,9.05264222807929,10.8389646093445,19.2788797911823,15.0316158264019,14.4066920487637,12.5001217965001,15.311562844117,17.1968044236475,39.4704484091424,76.0321828660514,76.9000150056312,28.2150022200788,51.0218880689529,16.4969391674985,24.272992855161,8.86605169549385,32.484343945182,27.5839016219118,74.3678391587654,12.5909723307623,32.6489136953729,51.8944454829119,52.3471795864118,49.214939757842,40.9118541076602,35.8120350663425,56.9517580374665,41.0126487346277,36.8311879509331,47.2051157836494,63.3303302659019,56.737765943403,42.6011511019937,21.0571885295768,29.8426642466458,0,0,0,2.07355300420312,1.72288698817931,7.20402445791014,2.69518743039963,3.02785021050754,1.09493207722749,18.7739438795779,33.44852878603,11.0507937081984,34.3632266743665,24.5439023767659,0.946454400318751,1.01150814046861,1.20505514941741,1.54411561825352,0.871517776369625,0.949082476444386,0.134831308160164,0.784885860501384,0,42.8130163682296,32.2556079747925,50.2120293824308,158.769408296385,1.26755034821831,0,15.3605375737165,3.09024169590255,0.122988438543114,10.4656364282101,0.219500570817251,0,0,0.0925884451585296,43.3325046062732,32.2379783436669,7.21656710126366,9.15850199303107,25.00805187223,18.0458059701342,23.6122611414071,20.7377025935712,1.58040879591855,0.858486162094873,0.492434012174795,0.702012795417713,0.148631162288728,0,5.71139235876122,0.283550194484773,0,0,1.15014803749563,0,0,4.76854665743776,0.864719720501769,2.5248486685276,19.2398619705272,28.6491319168708,17.582617081507,15.3965201420435,14.6015039638719,13.5154376029763,17.7212388230958,24.4445763872886,44.4679270209946,15.8410697373252,23.9152674151889,196.711045218535,29.58559633946,63.2932717471992,55.123941563024,11.8315392160585,4.25547396069835,8.79193190753128,43.1793540847606,37.4408907720096,21.4042487563,15.961073030393,44.4239935928182,10.2953743481346,0.301439377059586,0,0.699810938274399,1.2162378064119,0,0,15.3359907514613,35.6072001085753,8.5582143024431,3.61953266668948,9.04095819221687,7.16243852959582,4.25923547175404,0.788123040807709,0,0.513372145118994,0.254094624222463,2.60279707715243,3.09315525111078,1.34013012267479,0.637938751653163,0,0,0,27.6055856368065,31.5107428267597,12.2069260664881,71.3340055050668,42.4660993337245,48.7300462454858,55.4078892915533,31.2983943716828,29.562975527278,52.7712663591775,15.9414143648505,16.9619635058367,34.579678558297,66.3765923798691,61.4226728621432,1.24060815673732,1.50999940573032,1.06727557803444,3.03127571446259,3.32870879020994,2.72151263996712,28.7805057069781,23.3262199397855,33.6792113319688,39.2105796722445,30.1907276949355,68.5237704071768,22.2627099667486,15.4209693802656,28.942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| |||
|short_description=p1@GPR124 | |||
}} |
Latest revision as of 02:24, 18 September 2015
Short description: | p1@GPR124 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR124_5end |
Coexpression cluster: | C4749_Mesenchymal_Hepatic_sacrococcigeal_rhabdomyosarcoma_Smooth_Trabecular_Fibroblast |
Association with transcript: | 0bp_to_ENST00000416514, NM_032777_5end |
EntrezGene: | GPR124 |
HGNC: | 17849 |
UniProt: | F5GY26Q6YN44Q96PE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.53e-20 | 76 |
muscle cell | 3.44e-12 | 55 |
muscle precursor cell | 6.37e-12 | 58 |
myoblast | 6.37e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.37e-12 | 58 |
smooth muscle cell | 6.32e-10 | 43 |
smooth muscle myoblast | 6.32e-10 | 43 |
electrically responsive cell | 6.91e-10 | 61 |
electrically active cell | 6.91e-10 | 61 |
mesodermal cell | 2.42e-08 | 121 |
skin fibroblast | 5.05e-08 | 23 |