FFCP PHASE1:Hg19::chr9:114937676..114937698,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UWL2 | |||
|association_with_transcript=0bp_to_ENST00000374270_5end | |||
|cluster_id=chr9:114937676..114937698,- | |||
|description=CAGE_peak_4_at_SUSD1_5end | |||
|id=chr9:114937676..114937698,- | |||
|ontology_enrichment_celltype=CL:0000557!2.48e-26!71;CL:0000839!2.91e-26!70;CL:0000766!1.62e-25!76;CL:0002194!2.10e-25!63;CL:0000576!2.10e-25!63;CL:0000040!2.10e-25!63;CL:0000559!2.10e-25!63;CL:0002009!9.72e-24!65;CL:0002057!1.07e-21!42;CL:0000763!1.02e-18!112;CL:0000049!1.02e-18!112;CL:0000860!5.14e-18!45;CL:0002078!2.39e-09!44;CL:0000115!5.62e-09!35 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.02e-23;39!CL:0000234;3.02e-23;39!CL:0000860;3.65e-22;33!CL:0002057;3.65e-22;33!CL:0000576;1.04e-20;48!CL:0000766;3.25e-16;69!CL:0000763;1.19e-08;100!CL:0000115;6.09e-08;36!CL:1000449;1.47e-07;15!CL:0000235;7.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.78e-37,67;CL:0000766,9.50e-37,72;CL:0000839,1.41e-36,66;CL:0002194,5.17e-36,59;CL:0000576,5.17e-36,59;CL:0000040,5.17e-36,59;CL:0000559,5.17e-36,59;CL:0002009,5.61e-34,61;CL:0000473,8.43e-34,48;CL:0000234,8.43e-34,48;CL:0000860,2.00e-28,42;CL:0002057,2.00e-28,42;CL:0000763,3.05e-26,108;CL:0000049,3.05e-26,108;CL:0000738,3.18e-11,136;CL:0002087,2.55e-10,115;CL:0002031,2.78e-10,120;CL:0002032,1.60e-09,161;CL:0000837,1.60e-09,161;CL:0000037,1.64e-09,168;CL:0000115,2.95e-09,36;CL:0000988,3.42e-09,177;CL:0002078,5.00e-09,45;CL:1000449,2.74e-07,15;CL:0000235,7.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.84e-21;42!CL:0000049;1.97e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.69e-23!216;UBERON:0002371!2.20e-22!80;UBERON:0002193!5.57e-21!112;UBERON:0002405!1.68e-19!115;UBERON:0002390!3.87e-19!102;UBERON:0003061!3.87e-19!102;UBERON:0001474!7.83e-19!86;UBERON:0004765!2.41e-16!101;UBERON:0001434!2.41e-16!101;UBERON:0000926!1.13e-10!448;UBERON:0004120!1.13e-10!448;UBERON:0006603!1.13e-10!448;UBERON:0000480!1.54e-10!626;UBERON:0000467!1.75e-10!625;UBERON:0002204!5.80e-10!167;UBERON:0000468!9.99e-10!659;UBERON:0002050!2.52e-08!605;UBERON:0005423!2.52e-08!605;UBERON:0000062!2.55e-08!511;UBERON:0000923!3.51e-08!604;UBERON:0005291!3.51e-08!604;UBERON:0006598!3.51e-08!604;UBERON:0002532!3.51e-08!604;UBERON:0000922!4.31e-08!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.47e-07;15!UBERON:0004819;1.47e-07;15!UBERON:0001285;1.47e-07;15!UBERON:0007684;1.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-32,76;UBERON:0002405,2.21e-31,93;UBERON:0002193,1.14e-30,108;UBERON:0002390,8.44e-29,98;UBERON:0003061,8.44e-29,98;UBERON:0001474,8.68e-28,82;UBERON:0003081,7.11e-27,203;UBERON:0004765,1.59e-23,90;UBERON:0001434,3.05e-19,100;UBERON:0000926,7.93e-14,315;UBERON:0004120,7.93e-14,315;UBERON:0006603,7.93e-14,315;UBERON:0002204,9.01e-09,167;UBERON:0006555,9.76e-08,16;UBERON:0004819,9.76e-08,16;UBERON:0004211,2.74e-07,15;UBERON:0009773,2.74e-07,15;UBERON:0001231,2.74e-07,15;UBERON:0001285,2.74e-07,15;UBERON:0007684,2.74e-07,15;UBERON:0004208,2.74e-07,15 | |||
|phase1_expression=0.363356758541113,0.642301571672949,1.26858963686374,2.00146596706261,1.78784437770915,0,0,0,0,2.21160542851358,0.697801167972428,1.96597234917155,1.58260186937072,0.495065411840187,0.331397375727916,0,0,0,0.975865597581014,0.984968464614303,1.42800483870977,0.626909442956176,2.57612388417951,0.958120975510189,1.75759695432724,0.0764134057479513,0.0821005894499457,0,1.18009283054671,1.91914699048606,3.2511385896376,0,0.90361775633475,0.369754010166788,0,0,0.880801318004542,6.64794490238253,4.21143339687298,2.82114131930607,11.4196891862361,7.44955431843653,10.3030227053675,5.08893835728477,3.40088349319928,4.36651310138069,4.64858073811369,3.28934310417461,2.16794459626573,2.8769239232215,2.81776777182011,1.41889337933151,2.75796544589295,5.80936215225443,2.70852973188684,5.08254316765033,3.27487380069415,3.14612878223118,2.44867113896722,4.17207735198922,1.27867425159808,3.95821560224059,5.78444607102732,2.98357325372886,4.35313857942876,2.26954089876456,3.11411124497787,4.01997864410789,5.73631210262222,3.69221035998698,3.63239701580021,2.94622108790052,2.21523671208619,3.59133986730301,1.4882300997553,2.30624510059213,5.16711703273877,3.30389164251314,6.42902346788321,1.71007646244749,1.19350006319454,1.0959849225878,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,1.70763890732835,0,0.382273228125229,0,0.560508562981536,1.05353633910031,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.25618263945135,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0,0,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.511946444617674,1.24930726552346,0.473554504088034,0.821127996921047,0.403213486449465,0,0.144824403882799,2.43806866313962,0.670700859703636,0.383587685530591,0.722878304769133,1.00267582127178,0.144846518960824,0.795285947051099,1.45990461090791,0.945348171640679,0.443458794925128,1.40535657109002,1.17881167947941,0,0.370784442784429,11.0346113842592,12.5373410855472,5.45127638127347,0.715471872916026,0,0,2.58391129576717,0.860234595106124,3.12426451446835,1.69592382577203,0.838998872419812,1.6507082516404,1.67195973229448,2.58416759169329,2.13459757612026,6.02497102976406,0.402829317109147,0,1.22031028774085,1.10298924103761,0.81014194788176,2.05389375053383,3.14341121676638,2.92789849256638,1.53316637465883,2.84779697870439,2.93122790288652,0,0,0.436094052142534,0.993943903390637,0.506522046658319,0.132409180813219,1.14734648299525,1.06400514659507,1.12135520028461,0,0.24666754841716,0,0.942974704487816,0.980771418680752,1.36221684880438,0,0.468642863667593,0.312160076830321,0,0,1.17434498643765,0.323745888736263,0.842704840213491,0.61246251376468,0.61417158655884,0.826606249406124,2.37600571456411,0.494533858557114,0,0.718618141816238,0.168336113954066,0.500474079487857,0.554128230968366,0.877955241761676,0.919463387397059,0.45071417671979,1.13432183160021,0.538168907066586,0.85422955527427,0.211931901159562,1.20036438433761,1.33968288009971,0.257640540045629,0.558350568994769,1.35021065793013,0.292311015483596,1.00973509697646,1.19664868234989,0.484938170456436,2.4850671476163,0.503760491138201,0.67824236924195,0.193260853163297,0.272746120590835,1.43402297694502,0.243947412259191,0.132529768321485,0.464775771478074,0.518305275076852,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0.464367928031979,1.44375896333917,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,2.8810180793198,1.47008711385542,0,0,0.590789906681404,0,0.860919069801795,1.20097467208968,0.219500570817251,0,0,0,0.325808305310325,0,0,1.73895607462615,1.40890433082986,1.87676382089396,0.925971025153221,1.90254152234598,0,0.858486162094873,6.89407617044712,5.14809383306323,7.28292695214768,0.93733833986777,0.503946384596579,0.567100388969546,0,0,0.383382679165211,2.46331618947972,3.16974362447614,1.4512968087854,1.8735593944205,2.01987893482208,0.190493682876507,0.381988425558278,1.17217447210047,0,0.308482478109971,0,0,0.672786506072164,0.43596006883328,0.22001485746285,0.646358578788889,3.57656445851882,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,1.00084595560703,1.08524321078289,0,0.325736184293735,0.710783897485092,0.791951872933429,1.80863626235752,3.48613383440118,2.99918973546171,3.64871341923571,9.5428847372104,14.7583757638122,0.479249710983165,1.14861935834114,0,0.289562613335158,0.821905290201534,1.07436577943937,0.224170287987055,0,0.215627574859517,0.77005821767849,0,1.30139853857622,0,1.00509759200609,0.637938751653163,0,2.99161459204025,0.828831026872071,0.736148950314839,1.00034104211935,0.542530047399471,0,0.535286966391485,0.630809660135739,0.35142424497814,0.300946099727719,0,0,0.664225598535437,0.368738337083406,1.12948698808508,0.195801157462741,0.343143423810856,2.68798433959754,1.50999940573032,1.70764092485511,0.606255142892519,3.32870879020994,1.81434175997808,0,0.61384789315225,0.561320188866147,1.66580894032411,1.02341449813341,0.965123526861645,2.96836132889982,0.462629081407967,0.355123450626254,0.82127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| |||
|short_description=p4@SUSD1 | |||
}} |
Latest revision as of 05:29, 20 September 2015
Short description: | p4@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374270_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.78e-37 | 67 |
myeloid leukocyte | 9.50e-37 | 72 |
myeloid lineage restricted progenitor cell | 1.41e-36 | 66 |
monopoietic cell | 5.17e-36 | 59 |
monocyte | 5.17e-36 | 59 |
monoblast | 5.17e-36 | 59 |
promonocyte | 5.17e-36 | 59 |
macrophage dendritic cell progenitor | 5.61e-34 | 61 |
defensive cell | 8.43e-34 | 48 |
phagocyte | 8.43e-34 | 48 |
classical monocyte | 2.00e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-28 | 42 |
myeloid cell | 3.05e-26 | 108 |
common myeloid progenitor | 3.05e-26 | 108 |
leukocyte | 3.18e-11 | 136 |
nongranular leukocyte | 2.55e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.78e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.60e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-09 | 161 |
hematopoietic stem cell | 1.64e-09 | 168 |
endothelial cell | 2.95e-09 | 36 |
hematopoietic cell | 3.42e-09 | 177 |
meso-epithelial cell | 5.00e-09 | 45 |
epithelial cell of nephron | 2.74e-07 | 15 |
macrophage | 7.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-32 | 76 |
immune system | 2.21e-31 | 93 |
hemolymphoid system | 1.14e-30 | 108 |
hematopoietic system | 8.44e-29 | 98 |
blood island | 8.44e-29 | 98 |
bone element | 8.68e-28 | 82 |
lateral plate mesoderm | 7.11e-27 | 203 |
skeletal element | 1.59e-23 | 90 |
skeletal system | 3.05e-19 | 100 |
mesoderm | 7.93e-14 | 315 |
mesoderm-derived structure | 7.93e-14 | 315 |
presumptive mesoderm | 7.93e-14 | 315 |
musculoskeletal system | 9.01e-09 | 167 |
excretory tube | 9.76e-08 | 16 |
kidney epithelium | 9.76e-08 | 16 |
nephron epithelium | 2.74e-07 | 15 |
renal tubule | 2.74e-07 | 15 |
nephron tubule | 2.74e-07 | 15 |
nephron | 2.74e-07 | 15 |
uriniferous tubule | 2.74e-07 | 15 |
nephrogenic mesenchyme | 2.74e-07 | 15 |