FFCP PHASE1:Hg19::chrX:131623044..131623089,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20564 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010nrl.1_5end | |||
|cluster_id=chrX:131623044..131623089,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MBNL3_5end | |||
|id=chrX:131623044..131623089,- | |||
|ontology_enrichment_celltype=CL:0000037!3.10e-31!172;CL:0000566!3.10e-31!172;CL:0002031!3.29e-30!124;CL:0000738!4.92e-30!140;CL:0002032!6.12e-30!165;CL:0000837!6.12e-30!165;CL:0002087!4.96e-28!119;CL:0000988!3.35e-27!182;CL:0000839!2.42e-19!70;CL:0000557!6.32e-19!71;CL:0000766!9.08e-19!76;CL:0000763!1.38e-18!112;CL:0000049!1.38e-18!112;CL:0002009!7.74e-17!65;CL:0002194!2.45e-16!63;CL:0000576!2.45e-16!63;CL:0000040!2.45e-16!63;CL:0000559!2.45e-16!63;CL:0000860!1.42e-12!45;CL:0002057!5.07e-11!42;CL:0000945!9.73e-11!24;CL:0000826!9.73e-11!24;CL:0000542!1.15e-10!53;CL:0000051!1.15e-10!53;CL:0000838!2.11e-10!52;CL:0000236!1.16e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.33e-11;24!CL:0000576;4.79e-09;48!CL:0000766;8.55e-09;69!CL:0000473;2.16e-08;39!CL:0000234;2.16e-08;39!CL:0000236;3.59e-08;13!CL:0002087;6.95e-08;104!CL:0000860;1.26e-07;33!CL:0002057;1.26e-07;33!CL:0000542;5.45e-07;53!CL:0000738;6.53e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.18e-31,168;CL:0002032,4.49e-30,161;CL:0000837,4.49e-30,161;CL:0002031,6.08e-30,120;CL:0000738,1.10e-29,136;CL:0002087,1.00e-27,115;CL:0000988,1.20e-27,177;CL:0000839,4.28e-19,66;CL:0000557,1.16e-18,67;CL:0000763,1.18e-18,108;CL:0000049,1.18e-18,108;CL:0000766,1.28e-18,72;CL:0002009,1.58e-16,61;CL:0002194,5.09e-16,59;CL:0000576,5.09e-16,59;CL:0000040,5.09e-16,59;CL:0000559,5.09e-16,59;CL:0000473,1.32e-13,48;CL:0000234,1.32e-13,48;CL:0000860,2.95e-11,42;CL:0002057,2.95e-11,42;CL:0000945,5.74e-11,24;CL:0000826,5.74e-11,24;CL:0000542,9.33e-11,53;CL:0000051,9.33e-11,53;CL:0000838,1.73e-10,52;CL:0000236,8.12e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-08;42!CL:0000051;5.45e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-23!102;UBERON:0003061!3.17e-23!102;UBERON:0002193!9.27e-20!112;UBERON:0002371!8.05e-16!80;UBERON:0007023!2.14e-14!115;UBERON:0001474!9.98e-14!86;UBERON:0004765!1.17e-11!101;UBERON:0001434!1.17e-11!101;UBERON:0002405!5.80e-11!115;UBERON:0000178!6.28e-08!15;UBERON:0000179!6.28e-08!15;UBERON:0000463!6.28e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.29e-08;15!UBERON:0000179;4.29e-08;15!UBERON:0000463;4.29e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.69e-23,98;UBERON:0003061,4.69e-23,98;UBERON:0002193,1.92e-19,108;UBERON:0002371,1.67e-15,76;UBERON:0007023,1.05e-14,114;UBERON:0002405,1.49e-13,93;UBERON:0001474,2.44e-13,82;UBERON:0004765,8.61e-12,90;UBERON:0001434,1.20e-10,100;UBERON:0000178,4.35e-08,15;UBERON:0000179,4.35e-08,15;UBERON:0000463,4.35e-08,15 | |||
|phase1_expression=1.09007027562334,0.642301571672949,2.11431606143957,0,0,0.872338524100369,2.53299878168311,1.26343974685366,2.61185628199839,0.982935746006035,0,2.62129646556207,0.263766978228454,4.82688776544182,2.65117900582333,2.01697543935533,0,0,0,0.61560529038394,0.204000691244253,1.25381888591235,2.0036519099174,0.958120975510189,0.753255837568817,18.5684575967522,13.9571002064908,17.3163718890094,5.90046415273356,20.3429580991523,15.6364284549237,1.83884244895785,3.0120591877825,0.369754010166788,12.4722192934286,7.10846162437108,9.39521405871511,18.281848481552,12.0326668482085,11.718587018656,22.8393783724723,14.2513213048351,25.7575567634187,13.9582309228382,12.0920301980419,12.8569552429543,10.2268776238501,15.2132118568076,8.05236564327269,14.9600044007518,13.0641960329841,9.22280696565482,9.3081333798887,8.39130088658974,5.41705946377367,9.60035931667284,9.27880910196676,6.96642801779762,11.0190201253525,11.8743740018155,5.11469700639233,11.2149442063483,13.9624560335142,6.39337125799041,7.54544020434318,9.64554881974938,3.73693349397345,11.0549412712967,13.037072960505,10.2078757011405,12.1079900526674,8.10210799172642,5.37986058649504,19.8579969133225,17.4335525971336,15.0954224766031,17.9725809834392,11.263266963113,25.2339171114416,18.8108410869224,18.1014176251172,16.2571096850524,29.9193615584249,25.122376118058,34.6908609006786,23.4701622411579,26.0257391573408,25.2891073579973,17.8482115651913,26.7135051269902,34.7219911156764,51.0896354752717,49.6955196562797,10.5737062863221,3.92355994087075,7.37475437370216,10.2289080459193,7.8602152549833,9.86887195197644,3.8452893939856,0.651844533267181,3.31413464014313,1.94826728407911,8.24437380950284,2.06224135232386,2.21533894583621,2.97884250141517,9.22257502024861,9.49433237187111,10.8529017038426,11.0540007114339,7.82468331484642,3.26230438956533,4.0131124213457,3.1360657141493,10.3111501854785,3.44898444241729,4.46715679127419,9.36172860472161,6.37130828648194,7.1619179924206,4.75226022224187,2.10805166708882,2.30375900077953,13.742379920758,10.6549763419808,9.03240796613151,11.289977620585,13.3720097891754,8.97911304073354,4.87613732627923,5.36560687762909,4.09160197899297,2.53007406669196,1.00267582127178,3.47631645505977,1.5905718941022,0.973269740605272,1.13441780596881,1.33037638477538,1.84453049955565,7.20384915237419,1.45718115317017,5.19098219898201,14.2800853208061,12.8856005601458,12.8969221703299,7.3932093534656,9.72391348326217,2.60020250930695,1.39133685156694,0.860234595106124,0.347140501607594,0.56530794192401,0,1.10047216776027,0.208994966536811,1.03366703667732,1.06729878806013,2.34304428935269,0,0.760272105718513,0,0,1.62028389576352,2.67899184852239,2.69435247151404,1.91439516821648,0,0,0.366403487860815,1.31780417436063,0,2.61656431285521,0.993943903390637,0.12663051166458,0.397227542439656,0,0.354668382198357,1.12135520028461,0,0,10.2699641681923,0.808264032418128,1.63461903113459,0.302714855289863,0,1.17160715916898,4.37024107562449,0,3.13842229158782,2.11382097558777,2.26622122115384,1.26405726032024,2.24569588380383,3.19369225010597,5.6829179646671,0,0.741800787835671,0,0.718618141816238,3.70339450698946,4.8796222750066,1.93944880838928,0.438977620880838,0.612975591598039,1.65261864797256,1.02088964844019,0.717558542755448,1.70845911054854,2.11931901159562,0.300091096084402,1.54578793857658,0,0.18611685633159,0.337552664482532,0,0.252433774244115,2.30124746605748,0.484938170456436,0,0.10075209822764,0.169560592310488,2.89891279744945,3.54569956768085,3.72845974005705,0.487894824518382,0.397589304964456,0.69716365721711,0.310983165046111,0.504641701751257,0.72995471815166,1.56449532329816,1.92972281457866,1.38134921352481,1.85747171212792,2.16563844500876,22.2416784074907,22.9275178506218,20.485937540096,24.5955559193238,20.4806677446862,19.4561907671099,24.6741293933101,23.1541328847908,22.3153351028906,0.738155454624648,0,2.057870056657,1.47008711385542,6.33775174109154,0,4.13552934676983,1.7658523976586,2.82873408649161,0.514703430895577,5.1582634142054,1.1240175325762,6.03173834469785,7.68484094815796,0.977424915930974,2.07986957055916,0,0.579652024875384,0.352226082707465,0.433099343283221,0,0.380508304469197,5.53143078571493,0.858486162094873,18.2200584504674,10.9982004615442,17.6871083123587,0.93733833986777,2.01578553838631,1.41775097242386,6.71688920271362,4.06887513919547,1.91691339582606,52.22230321697,14.9682337822484,12.6470150479871,10.5207565994382,17.2952133794141,3.74637576323797,4.96584953225761,0,3.4214489204541,2.46785982487976,0.901029173531752,5.71652865261156,0.112131084345361,0.43596006883328,0.5867062865676,1.68053230485111,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.799266537048298,0.714889968290738,2.17048642156577,0,0,0.355391948742546,3.16780749173372,2.41151501647669,1.74306691720059,4.09889263846434,20.6760427090024,29.1309113030633,16.8667151586425,0.239624855491583,0,5.70547620162874,0.723906533337896,3.49309748335652,4.65558504423729,2.91421374383171,12.0188763723176,10.3501235932568,13.7327048819331,2.03275699377971,0,0,0.335032530668698,0,12.7331194071021,26.9245313283622,13.2612964299531,3.43536176813592,4.50153468953709,1.08506009479894,0.207970861530807,0.535286966391485,1.73472656537328,0.35142424497814,0.300946099727719,0,3.10419213877515,1.99267679560631,0,10.3391501217019,0.391602314925481,0.343143423810856,14.2669938024792,20.0614206761314,20.0647808670475,0.303127571446259,0,0.30239029332968,0.992431231275107,0,0,1.79394808957981,0,1.12597744800525,0,2.00472601943452,2.66342587969691,5.00975651684236,0.519254429183621,1.16210378459959,1.20859449591622,2.00506470303285,4.41988746892302,2.98517565227978,1.27463817604702,2.49136388422906,2.25599806453706,0.385076685522074,0,0,0.527758144464379,1.13733384070897,0.680374821106063,1.72732732881711,0,0.812839312631559,0,1.01950509218015,0,0.895499018888713,87.265430905082,78.692070758495,2.05160100093111,0.328014645699706,0.650756789328606,18.54738209659,2.01452822600355,2.0627374980147,3.44559322797703,4.55042172225565,1.6068392984416,3.67348729510063,1.23238893691716,1.99554777143968,0.551346289938122,4.29680979473094,5.51063436874068,2.98293195956353,3.56128142586949,3.96683796866347,5.95789208831829,5.48734663726712,5.4625201661997,0,0,1.3940745403212,0,0,0,0.74129687641568,0.286249773483982,1.48863347743867,2.21465597303108,0.38126038784765,0.511795582622668,3.42351190427136,0,0,3.59744915166629,3.0199073270966,1.64937363283961,0,0,0,1.46290121726877,1.94970791705028,0,0.545999645631943,4.24216295861138,2.26016233240486,0.551365343546124,1.32687795048244,0,1.15755106853338,3.27947376023316,0.202910376962704,0,0.563391205064483,1.14729081763241,0.392996164052485,0.35667105148125,3.19284957663538,7.59987487071591,3.95153871551882,0,1.04980416073495,3.1753297199419,2.68120910214315,2.17781969722645,17.4166031437041,1.29151611801369,0,3.54744122829341,5.28363820476007,1254.41049002192,896.919443978006,3955.63006773738,2090.96029319301,1631.46277505985,846.257671106496,800.326589986886,4521.60663005364,0,0,3.18552280775341,12.4488127334232,6.34784537096357,3.05909926398181,2.8696729091188,3.99158742865633,7.85172017542703,11.8537206325374,2.59697552219644,7.01992945283647,5.70586697582981,2.6635582281414,5.01268954180134,3.04725200042886,1.76646882614069,2.21979677910152,3.83261613921294,14.0837191349864,11.3679082794129,7.60498766834214,12.680534770105,9.37862857929793,5.01131113011436,9.84699191581699,6.22048060494761,35.6387005757667,23.9677908649344,56.7035837436906,13.3322443137424,0,2.34031106982705,0,2.62618933211459,2.37571744666111,1.84296421259539,3.97659059106519,3.09472716103128,0,8.40499758556474,16.0455310177275,18.7293108956006,27.0758237220525,5.03865495708552,2.35217969754956,13.1700741843344,0.311039587661807,5.39210106883961,26.3161126773145,4.60415133204185,18.4463168541066,3096.51638404593,0,3.87733098438087,2.69027484669369,0,4.16684417736373,25.5383199988891,19.5749885367394,20.7104075879609,20.8487993240068,39.9495182187812,2.75794698593172,1.45802306691627,0.868124974666461,2.65722415744152,2.41192877250816,0,0.774054819518572,2.06883333267483,7.89787429754301,20.9161849956461,22.4472228288551,8.38757817691388,0,0,0.538545866458633,1.84700532267414,3.50901275705111,0.183195186803725,0.533034776018635,4.08773192782946,7.22109179417114,21.1088836013199,0,0,0,0,16.5294042139594,1.89898258075224,0,3.1097675715467,6.92443647174692,31.8483817945122,16.1877343041111,43.994170435221,3.55825354416746,4.81899361891361,4.59456577824004,3.90926571287927,29.6953729500552,2.10838001152805,20.4349363921546,12.1312063737896,0,20.1238045453189,36.2972148145992,3.67287313956588,21.6098102329429,0.60129367765797,1.9700756365477,0,0,0.627865836814451,0,3.9845336444171,0,0.347119476670262,5.09560466554764,0.34823682632161,23.23864687619,0,30.9620260125072,34.9366935671967,27.7550244839847,26.8659575672922,0,6.55344148263544,4.52238351334278,3.7755776223568,2.02594547058812,27.3771935828724,8.73731140741717,14.3013506475366,0.999048047910651,7.06043044055119,0,0.514784993585894,0,0.49701014226173,12.2560898000734,0,0,7.54786810508781,0,3.00210144354895,3.9702559878678,11.4971929260275,2.14882720709979,1.8402114799552,11.4505784521624,5.49985017628041,9.33234931949858,6.7890860169657,5.15071257763885,5.13294352116307,14.6459970021063,0,2.32991899054908,6.53900413149956,5.19219907801349,5.12266933291805,0.196854963029498,14.7331597794465,5.56660782866512,4.35850899557042,0,0.825236619583403,0.83088067605837,14.398329059296,8.51182150013745,2.24773359634691,4.02521625119119,12.6089131678717,13.2185562100195,0,0,1.53532157855556,11.4351252219739,11.2555634962123,0,0,0,0.326587360109409,0,2.54486814322951,0.170388021785422,2.83280228800314,7.76726838493837,45.0523422301552,5.17131825446202,3.70251284879532,0,53.5659416960671,24.133955240299,21.8513984088536,43.4951008114555,34.2354555050246,22.5277260363656,57.2425212390211,18.5118964753353,38.6252640392327,23.0634702500884,39.2122338257231,31.1478999174314,14.1348686625211,1.77213635993397,3.53876168215693,3.8809188519015,6.30750115259078,5.43552352530576,4.53303741472099,2.07522952404346,0.249960815924213,3.1846314683746,4.56744533671948,0.705797459094515,4.21501415226193,3.62302571527063,1.64180283175561,0.701139929541673,1.10961172300523,1.51522404220071,1.50940741051545,8.00830099436882,0.457680136793847,0.453692771289717,0.466311601748341,0.295710299979268,0.955780602982214,0.449803112163605,0.621051827505038,2.48823724704513,0.265841714557995,0.521745061811734,1.20206087197775,2.28483127301277,0.406870733204662,0.181848659202559,1.18151612746737,0.928067519756987,0.796191777397232,0.800055529326307,2.06037423109676,3.03074539889327,0,0,1.50109113962448,0.260994291965212,0,1.15761237161917,0,0,0.308801447160972,4.16639694199544,0.176689145945881,0.578742114812744,0.168942440653073,10.5059022621058,0,0,2.90342715918635,0.779441235357554,1.86010776438708,2.78061170234935,0,1.2288645437686,4.86017883724842,6.99955885492255,6.72157897073088,12.3994785355787,0,12.8874165176288,1.81843360035278,6.8428498603627,3.06946491128764,6.25383906100754,0.786329709279482,3.05786986937639,5.43144095852881,1.48802444071178,0,2.23457967189298,0.318004350653419,1.41951141002256,0,0.705351887381368,8.57487336588961,1.99110597799025,0,3.35231104020018,2.05116364240755,0.756215088665154,1.03735878696327,3.22951291263702,8.56616521554926,12.4647602496303,0.943757786781923,19.8102886403413,6.3539116382686,1.1441462864015,1.3807198521202,3.77940822020922,11.2815492523886,3.63069123666336,24.2269343482259,0,0.982631505060581,8.57565300058863,2.70150338473579,4.68646859168308,2.68692835451539,1.45856363445986,0.546974809018219,13.7064441714296,13.8939129949002,6.8589785300252,16.4813531655078,3.74991285114801,1.68141861109412,16.3880713143891,17.0746643513473,18.9823072148047,3.68748760178494,2.91529616043611,2.58284985311961,1.51277379194553,0.709163045303809,5.11664448703518,12.6373879489328,1.88538707899202,0.560544326627578,14.6105395281519,2.15927591218621,0,8.07684949196217,6.16253085757634,0,17.7335437748631,2.40513409419076,7.8742142381954,15.0232259842676,12.4426739126537,3.8720462293825,6.62659204091166,3.91981661892125,15.6653208570644,8.47695413612985,0.62041277132864,0.955538938977433,1.23040974977572,2.35560560676583,35.6000340948227,2.58971534875158,2.97722139883116,49.8720205475426,25.2569716390753,7.01818390386317,4.57586782871147,0,1.1294608203896,0.109940516745429,22.191538004301,24.5413822783264,22.2930751714036,6.58444214906132,11.0316744789257,68.5818752065731,9.61911488863232,9.20843841013967,13.9476390102522,0,30.168837671533,45.0560636935304,8.69488056546882,5.71372603538104,7.76368717774522,15.6470665043878,49.6628744007632,15.1380663523498,7.31031874072402,6.62640561211375,1.8357702351547,6.54526035510566,16.3998320559774,4.46394021800102,5.0839319149456,2.59575937274273,0.756998549010474,0.218531143927391,0.760191006068622,0,0.26721740526556,0.18378979906969,0.250707539292375,9.39655857906169,2.41167717140561,4.1458471972939,4.96478380137097,18.5513564253853,34.0432136993149,5.61923515573253,7.0765174297278,4.82167009096638,9.41977942516841,21.0201876516548,19.3767905628296,22.5873978716285,20.1382638513617,11.1886640412575,34.2640167242394,3.09332420721703,3.73545710572004,3.8614456457388,9.34182101908504,23.4640942403454,2.93379466038879,20.3448089157869,23.3014870964929,17.7120938360103,12.1816027075229 | |||
|short_description=p1@MBNL3 | |||
}} |
Latest revision as of 11:36, 19 September 2015
Short description: | p1@MBNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MBNL3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_uc010nrl.1_5end |
EntrezGene: | MBNL3 |
HGNC: | 20564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.18e-31 | 168 |
hematopoietic oligopotent progenitor cell | 4.49e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-30 | 161 |
hematopoietic lineage restricted progenitor cell | 6.08e-30 | 120 |
leukocyte | 1.10e-29 | 136 |
nongranular leukocyte | 1.00e-27 | 115 |
hematopoietic cell | 1.20e-27 | 177 |
myeloid lineage restricted progenitor cell | 4.28e-19 | 66 |
granulocyte monocyte progenitor cell | 1.16e-18 | 67 |
myeloid cell | 1.18e-18 | 108 |
common myeloid progenitor | 1.18e-18 | 108 |
myeloid leukocyte | 1.28e-18 | 72 |
macrophage dendritic cell progenitor | 1.58e-16 | 61 |
monopoietic cell | 5.09e-16 | 59 |
monocyte | 5.09e-16 | 59 |
monoblast | 5.09e-16 | 59 |
promonocyte | 5.09e-16 | 59 |
defensive cell | 1.32e-13 | 48 |
phagocyte | 1.32e-13 | 48 |
classical monocyte | 2.95e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.95e-11 | 42 |
lymphocyte of B lineage | 5.74e-11 | 24 |
pro-B cell | 5.74e-11 | 24 |
lymphocyte | 9.33e-11 | 53 |
common lymphoid progenitor | 9.33e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.73e-10 | 52 |
B cell | 8.12e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.69e-23 | 98 |
blood island | 4.69e-23 | 98 |
hemolymphoid system | 1.92e-19 | 108 |
bone marrow | 1.67e-15 | 76 |
adult organism | 1.05e-14 | 114 |
immune system | 1.49e-13 | 93 |
bone element | 2.44e-13 | 82 |
skeletal element | 8.61e-12 | 90 |
skeletal system | 1.20e-10 | 100 |
blood | 4.35e-08 | 15 |
haemolymphatic fluid | 4.35e-08 | 15 |
organism substance | 4.35e-08 | 15 |