FFCP PHASE1:Hg19::chrX:153979835..153979845,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=139716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17515 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000496390,uc004fml.1_5end | |||
|cluster_id=chrX:153979835..153979845,- | |||
|coexpression_cluster_id=C3924 | |||
|description=CAGE_peak_10_at_GAB3_5end | |||
|id=chrX:153979835..153979845,- | |||
|ontology_enrichment_celltype=CL:0000763!1.98e-27!112;CL:0000049!1.98e-27!112;CL:0000037!1.41e-19!172;CL:0000566!1.41e-19!172;CL:0002032!1.94e-19!165;CL:0000837!1.94e-19!165;CL:0000988!5.67e-18!182;CL:0000839!1.78e-13!70;CL:0002274!1.66e-11!5;CL:0000457!1.66e-11!5;CL:0002191!1.66e-11!5;CL:0000097!1.66e-11!5;CL:0000831!1.66e-11!5;CL:0002028!1.66e-11!5;CL:0000557!3.42e-10!71;CL:0000766!2.95e-09!76;CL:0000764!2.04e-08!2;CL:0000765!2.04e-08!2;CL:0000050!2.04e-08!2;CL:0000038!2.04e-08!2;CL:0000558!2.04e-08!2;CL:0000547!2.04e-08!2;CL:0000549!2.04e-08!2;CL:0000550!2.04e-08!2;CL:0000552!2.04e-08!2;CL:0002031!4.93e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.21e-34;2!CL:0000558;1.21e-34;2!CL:0000097;5.01e-14;5!CL:0000163;3.30e-08;9!CL:0000763;1.61e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.31e-34,2;CL:0000765,1.31e-34,2;CL:0000050,1.31e-34,2;CL:0000038,1.31e-34,2;CL:0000558,1.31e-34,2;CL:0000547,1.31e-34,2;CL:0000549,1.31e-34,2;CL:0000550,1.31e-34,2;CL:0000552,1.31e-34,2;CL:0000763,1.50e-17,108;CL:0000049,1.50e-17,108;CL:0000097,5.72e-14,5;CL:0002028,5.72e-14,5;CL:0002032,1.59e-11,161;CL:0000837,1.59e-11,161;CL:0000037,5.20e-11,168;CL:0000988,2.09e-10,177;CL:0000163,3.55e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.65e-24!31;DOID:1240!2.28e-23!39;DOID:1036!5.57e-21!8;DOID:2531!9.08e-17!51;DOID:0060083!9.08e-17!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;8.19e-52;8!DOID:8692;6.63e-26;31!DOID:1240;4.91e-18;39!DOID:8552;1.22e-17;1!DOID:2531;2.90e-11;51!DOID:0060083;2.90e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.77e-52,8;DOID:8692,8.56e-26,31;DOID:1240,1.89e-20,39;DOID:8552,8.72e-18,1;DOID:2531,1.45e-15,51;DOID:0060083,1.45e-15,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.29e-10!112;UBERON:0002405!8.47e-10!115;UBERON:0002390!1.63e-09!102;UBERON:0003061!1.63e-09!102;UBERON:0002371!1.35e-08!80;UBERON:0001474!1.01e-07!86;UBERON:0002370!3.34e-07!4;UBERON:0005058!3.34e-07!4;UBERON:0009113!3.34e-07!4;UBERON:0003295!3.34e-07!4;UBERON:0005562!3.34e-07!4;UBERON:0004177!4.87e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.829312462163088,1.00883967391873,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28889814968902,4.18296721639841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,1.23087398947712,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,1.32969345520125,2.25595660617181,2.94093801476609,2.3495022176618,2.84630599086278,3.65554131654871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,1.07185652062471,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p10@GAB3 | |||
}} |
Latest revision as of 04:16, 20 September 2015
Short description: | p10@GAB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GAB3_5end |
Coexpression cluster: | C3924_acute_Reticulocytes_chronic_CD34_Fibroblast_Smooth_cord |
Association with transcript: | 12bp_to_ENST00000496390, uc004fml.1_5end |
EntrezGene: | GAB3 |
HGNC: | 17515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.31e-34 | 2 |
erythroblast | 1.31e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.31e-34 | 2 |
erythroid progenitor cell | 1.31e-34 | 2 |
reticulocyte | 1.31e-34 | 2 |
proerythroblast | 1.31e-34 | 2 |
basophilic erythroblast | 1.31e-34 | 2 |
polychromatophilic erythroblast | 1.31e-34 | 2 |
orthochromatic erythroblast | 1.31e-34 | 2 |
myeloid cell | 1.50e-17 | 108 |
common myeloid progenitor | 1.50e-17 | 108 |
mast cell | 5.72e-14 | 5 |
basophil mast progenitor cell | 5.72e-14 | 5 |
hematopoietic oligopotent progenitor cell | 1.59e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-11 | 161 |
hematopoietic stem cell | 5.20e-11 | 168 |
hematopoietic cell | 2.09e-10 | 177 |
endocrine cell | 3.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.77e-52 | 8 |
myeloid leukemia | 8.56e-26 | 31 |
leukemia | 1.89e-20 | 39 |
chronic myeloid leukemia | 8.72e-18 | 1 |
hematologic cancer | 1.45e-15 | 51 |
immune system cancer | 1.45e-15 | 51 |