FFCP PHASE1:Hg19::chrX:47444716..47444731,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:47444716..47444731,- | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_at_chrX:47444716..47444731,- | |||
|id=chrX:47444716..47444731,- | |||
|ontology_enrichment_celltype=CL:0000055!2.42e-17!180;CL:0000048!3.26e-13!430;CL:0000723!1.15e-12!436;CL:0000034!1.44e-11!444;CL:0000057!1.56e-11!75;CL:0000680!7.52e-11!57;CL:0000056!7.52e-11!57;CL:0000355!7.52e-11!57;CL:0000183!1.49e-10!59;CL:0000187!3.01e-10!54;CL:0000192!9.47e-10!42;CL:0000514!9.47e-10!42;CL:0002371!4.21e-09!591;CL:0000393!6.92e-09!60;CL:0000211!6.92e-09!60;CL:0002494!1.51e-08!16;CL:0000359!6.43e-08!32;CL:0002334!1.39e-07!12;CL:0000144!2.99e-07!625;CL:0002320!3.15e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.33e-12;5!CL:0000359;7.17e-10;32!CL:0002593;4.08e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.68e-12,5;CL:0000359,8.08e-10,32;CL:0000048,1.81e-09,427;CL:0000723,3.40e-09,433;CL:0002593,5.01e-09,2;CL:0000057,6.74e-09,76;CL:0000034,7.65e-09,441;CL:0000192,7.90e-07,43;CL:0000514,7.90e-07,43;CL:0000680,8.01e-07,58;CL:0000056,8.01e-07,58;CL:0000355,8.01e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.48e-10!83;UBERON:0002329!2.48e-10!83;UBERON:0003077!2.48e-10!83;UBERON:0003059!2.48e-10!83;UBERON:0007282!2.48e-10!83;UBERON:0009618!2.48e-10!83;UBERON:0007285!2.48e-10!83;UBERON:0004290!4.32e-10!70;UBERON:0001134!2.48e-09!61;UBERON:0002036!2.48e-09!61;UBERON:0003082!2.48e-09!61;UBERON:0002385!3.84e-09!63;UBERON:0001015!3.84e-09!63;UBERON:0000383!3.84e-09!63;UBERON:0000486!4.18e-08!82;UBERON:0002384!1.02e-07!375;UBERON:0002204!1.16e-07!167;UBERON:0004872!7.40e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.62e-13;7!UBERON:0003834;1.33e-12;5!UBERON:0001533;1.33e-12;5!UBERON:0005406;1.76e-09;2!UBERON:0002456;4.08e-09;2!UBERON:0004573;1.32e-08;33!UBERON:0004571;1.32e-08;33!UBERON:0002072;6.57e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,3.05e-13,7;UBERON:0003834,2.68e-12,5;UBERON:0001533,2.68e-12,5;UBERON:0005406,1.78e-09,2;UBERON:0004573,2.88e-09,33;UBERON:0004571,2.88e-09,33;UBERON:0002456,5.01e-09,2;UBERON:0001637,1.67e-08,42;UBERON:0003509,1.67e-08,42;UBERON:0004572,1.67e-08,42;UBERON:0007524,4.17e-08,73;UBERON:0002072,6.31e-08,5;UBERON:0007503,2.23e-07,78;UBERON:0002329,3.15e-07,71;UBERON:0003059,3.15e-07,71;UBERON:0007282,3.15e-07,71;UBERON:0004290,3.15e-07,71;UBERON:0009618,3.15e-07,71;UBERON:0003077,4.35e-07,72;UBERON:0007285,4.35e-07,72;UBERON:0000486,8.27e-07,83 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,8.72338524100369,2.53299878168311,0,3.13422753839806,0,1.39560233594486,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0,0,0,0,1.27867425159808,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,4.69490601792545,0.639312809217652,0.361439152384566,0,0.579386075843295,0,2.91980922181582,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.25326102332916,0.132409180813219,0.860509862246441,1.06400514659507,0.560677600142307,0,0.74000264525148,0.311211035399766,0.134710672069688,0.980771418680752,0,0.576175924479999,0,0.312160076830321,0,1.49448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,1.23633464639278,0,1.43723628363248,0,0,0.277064115484183,0.438977620880838,1.83892677479412,1.05166641234618,0.340296549480063,0.179389635688862,0.640672166455702,0.211931901159562,1.50045548042201,0.309157587715317,0,0,0,0,0,0,0,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0,0,0,1.40241773803446,0,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,1.04007436911366,0.771622122786426,1.41849132023278,0.266422179016099,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0,0,0.399891964728228,1.2162378064119,0,0,0,0,0,0.434343920002738,1.2328579353023,0,0.112085143993527,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0.623912584592421,0.892144943985809,0.315404830067869,0.234282829985426,0.300946099727719,0,2.0694614258501,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0.496215615637554,0,0.841980283299221,1.28139149255701,0.511707249066704,2.73451665944133,5.93672265779964,0.462629081407967,2.84098760501003,0.246381468041427,0.519254429183621,0.232420756919918,0,0,0.0920809889358963,0.574072240823034,0.364182336013434,3.01586154406675,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.41254749960294,0,0,0,0,0,0.614014698904518,0.689182862422653,0,0.290033387828457,0.767039646744908,0,0,0,0,0.10115778085555,1.39453664789186,1.25924938732256,0,1.23213432070436,0,0,0.55597265731176,0,0,0.316379424718726,0.953150969619124,0,0,1.90921948755562,0.78494864019923,0.179872457583315,0.823611089208164,0.471249609382746,0.606547444719948,1.58510321173008,0.421258456238981,0.48763373908959,2.43713489631284,2.11300293513511,0.545999645631943,0.989838023675989,3.39024349860728,1.10273068709225,1.32687795048244,0.876901770507525,0,0,0,0.92947049429925,0.563391205064483,0,0.0982490410131212,0,0.354761064070598,2.74439925886963,0.658589785919804,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0.18714054040822,0.146508179271894,0.36408156524854,0,0.284136146806413,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.597743964753209,0,0,0.102268682502155,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.568679216656392,0,0,0,0.330991955875499,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0.0967563312890851,0.146178634172371,0.246346371159628,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0.104602846312333,0,0,0,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0,1.44119953416961,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0,0.537862017998534,0,0,0,0,1.62899880526114,0,1.63293680054705,0,0.246277562248017,0.170388021785422,0.226624183040251,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5879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| |||
|short_description=p@chrX:47444716..47444731,- | |||
}} |
Latest revision as of 08:25, 1 August 2015
Short description: | p@chrX:47444716..47444731, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:47444716..47444731, - |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.68e-12 | 5 |
vascular associated smooth muscle cell | 8.08e-10 | 32 |
multi fate stem cell | 1.81e-09 | 427 |
somatic stem cell | 3.40e-09 | 433 |
smooth muscle cell of the internal thoracic artery | 5.01e-09 | 2 |
fibroblast | 6.74e-09 | 76 |
stem cell | 7.65e-09 | 441 |
smooth muscle cell | 7.90e-07 | 43 |
smooth muscle myoblast | 7.90e-07 | 43 |
muscle precursor cell | 8.01e-07 | 58 |
myoblast | 8.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 3.05e-13 | 7 |
thoracic segment blood vessel | 2.68e-12 | 5 |
subclavian artery | 2.68e-12 | 5 |
perirenal fat | 1.78e-09 | 2 |
systemic artery | 2.88e-09 | 33 |
systemic arterial system | 2.88e-09 | 33 |
internal thoracic artery | 5.01e-09 | 2 |
artery | 1.67e-08 | 42 |
arterial blood vessel | 1.67e-08 | 42 |
arterial system | 1.67e-08 | 42 |
dense mesenchyme tissue | 4.17e-08 | 73 |
hypodermis | 6.31e-08 | 5 |
epithelial vesicle | 2.23e-07 | 78 |
somite | 3.15e-07 | 71 |
presomitic mesoderm | 3.15e-07 | 71 |
presumptive segmental plate | 3.15e-07 | 71 |
dermomyotome | 3.15e-07 | 71 |
trunk paraxial mesoderm | 3.15e-07 | 71 |
paraxial mesoderm | 4.35e-07 | 72 |
presumptive paraxial mesoderm | 4.35e-07 | 72 |
multilaminar epithelium | 8.27e-07 | 83 |