FFCP PHASE1:Mm9::chr11:70420158..70420172,+: Difference between revisions
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|id=chr11:70420158..70420172,+
|short_description=p5@Mink1
|description=CAGE_peak_5_at_Mink1_5end
|association_with_transcript=-30bp_to_ENSMUST00000153503_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50932 | |EntrezGene=50932 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENSMUST00000153503_5end | |||
|cluster_id=chr11:70420158..70420172,+ | |||
|description=CAGE_peak_5_at_Mink1_5end | |||
|id=chr11:70420158..70420172,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.50e-18,3;CL:0000117,7.80e-16,23;CL:0000337,7.80e-16,23;CL:0002194,3.10e-14,4;CL:0000766,3.10e-14,4;CL:0000234,3.10e-14,4;CL:0000576,3.10e-14,4;CL:0000235,3.10e-14,4;CL:0000864,3.10e-14,4;CL:0002009,3.10e-14,4;CL:0000040,3.10e-14,4;CL:0000559,3.10e-14,4;CL:0002611,1.38e-13,2;CL:0000878,2.42e-13,2;CL:0000129,2.42e-13,2;CL:0002319,7.99e-13,43;CL:0000221,1.66e-12,44;CL:0000133,1.66e-12,44;CL:0000540,8.60e-11,33;CL:0000047,8.60e-11,33;CL:0000031,8.60e-11,33;CL:0000404,8.60e-11,33;CL:0000393,5.31e-09,39;CL:0000211,5.31e-09,39;CL:0002612,8.49e-09,3;CL:0000473,2.30e-08,7;CL:0000557,2.30e-08,7;CL:0002321,2.15e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.03e-20,5;UBERON:0002315,9.03e-20,5;UBERON:0004684,3.50e-18,3;UBERON:0002275,3.50e-18,3;UBERON:0002240,1.59e-16,6;UBERON:0005174,1.59e-16,6;UBERON:0001137,1.59e-16,6;UBERON:0002256,1.38e-13,2;UBERON:0002257,8.49e-09,3;UBERON:0001017,1.36e-08,73;UBERON:0003076,2.27e-08,12;UBERON:0003057,2.27e-08,12;UBERON:0001016,2.52e-08,75;UBERON:0000073,6.53e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78960287347852,4.61061966385865,0,0,0.210324961351382,10.8547374073445,9.49734726091938,0.244981598429908,0.191690942036473,0,1.10115880999389,2.68143409978894,1.68967186581868,0,0.0914876436024097,0,1.67509799400829,0,0.916789486660861,1.17851434189467,3.70166370077668,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970601099684455,0,0,0,0,0,0,0,0,0,0,1.37250180845588,0,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.452114453507145,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,0,0,0,0.322928853391811,0.241251699712623,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,1.01078884705519,1.01391719956096,0.565879024158229,0.280924522409647,0.320125762024346,0.287177344778066,0,0.231768651889711,0.578727661391115,0.824171801606613,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.182927972872773,0,0.271608227691724,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0.765153328275374,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78960287347852,4.61061966385865,0,0,0.210324961351382,10.8547374073445,9.49734726091938,0.244981598429908,0.191690942036473,0,1.10115880999389,2.68143409978894,1.68967186581868,0,0.0914876436024097,0,1.67509799400829,0,0.916789486660861,1.17851434189467,3.70166370077668,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970601099684455,0,0,0,0,0,0,0,0,0,0,1.37250180845588,0,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.452114453507145,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11204537257339,0,0,0,0.322928853391811,0.241251699712623,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,1.01078884705519,1.01391719956096,0.565879024158229,0.280924522409647,0.320125762024346,0.287177344778066,0,0.231768651889711,0.578727661391115,0.824171801606613,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.182927972872773,0,0.271608227691724,0.561142271657738,0.593175090620871,0.29551344712669,0,0.309873682371932,0.578719832943424,0,0,0.214871054048298,0.765153328275374,0.220591419119515,0.463735671240843 | ||
|short_description=p5@Mink1 | |||
}} | }} |
Latest revision as of 14:46, 25 September 2015
Short description: | p5@Mink1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mink1_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | -30bp_to_ENSMUST00000153503_5end |
EntrezGene: | Mink1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.50e-18 | 3 |
CNS neuron (sensu Vertebrata) | 7.80e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.80e-16 | 23 |
monopoietic cell | 3.10e-14 | 4 |
myeloid leukocyte | 3.10e-14 | 4 |
phagocyte | 3.10e-14 | 4 |
monocyte | 3.10e-14 | 4 |
macrophage | 3.10e-14 | 4 |
tissue-resident macrophage | 3.10e-14 | 4 |
macrophage dendritic cell progenitor | 3.10e-14 | 4 |
monoblast | 3.10e-14 | 4 |
promonocyte | 3.10e-14 | 4 |
neuron of the dorsal spinal cord | 1.38e-13 | 2 |
central nervous system macrophage | 2.42e-13 | 2 |
microglial cell | 2.42e-13 | 2 |
neural cell | 7.99e-13 | 43 |
ectodermal cell | 1.66e-12 | 44 |
neurectodermal cell | 1.66e-12 | 44 |
neuron | 8.60e-11 | 33 |
neuronal stem cell | 8.60e-11 | 33 |
neuroblast | 8.60e-11 | 33 |
electrically signaling cell | 8.60e-11 | 33 |
electrically responsive cell | 5.31e-09 | 39 |
electrically active cell | 5.31e-09 | 39 |
neuron of the ventral spinal cord | 8.49e-09 | 3 |
defensive cell | 2.30e-08 | 7 |
granulocyte monocyte progenitor cell | 2.30e-08 | 7 |
embryonic cell | 2.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 9.03e-20 | 5 |
gray matter of spinal cord | 9.03e-20 | 5 |
raphe nuclei | 3.50e-18 | 3 |
reticular formation | 3.50e-18 | 3 |
spinal cord | 1.59e-16 | 6 |
dorsal region element | 1.59e-16 | 6 |
dorsum | 1.59e-16 | 6 |
dorsal horn of spinal cord | 1.38e-13 | 2 |
ventral horn of spinal cord | 8.49e-09 | 3 |
central nervous system | 1.36e-08 | 73 |
posterior neural tube | 2.27e-08 | 12 |
chordal neural plate | 2.27e-08 | 12 |
nervous system | 2.52e-08 | 75 |
regional part of nervous system | 6.53e-08 | 54 |