FFCP PHASE1:Hg19::chr20:50479417..50479427,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000438154_5end | |association_with_transcript=23bp_to_ENST00000438154_5end | ||
|cluster_id=chr20:50479417..50479427,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_2_at_ENST00000438154_5end | |description=CAGE_peak_2_at_ENST00000438154_5end |
Latest revision as of 15:24, 28 July 2015
Short description: | p2@ENST00000438154 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000438154_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 23bp_to_ENST00000438154_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@ENST00000438154 |
---|
0
1
2
3
4
5
6
7
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.99e-50 | 1 |
acinus | 3.99e-50 | 1 |
intrahepatic bile duct | 3.99e-50 | 1 |
portal lobule | 3.99e-50 | 1 |
hepatic acinus | 3.99e-50 | 1 |
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
liver parenchyma | 9.46e-18 | 3 |
liver lobule | 9.46e-18 | 3 |
Showing 1 to 10 of 30 entries
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.18e-26 | 2 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |
Showing 1 to 5 of 5 entries