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FFCP PHASE1:Mm9::chr14:24823340..24823366,-: Difference between revisions

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(Created page with "{{FFCP |id=chr14:24823340..24823366,- |short_description=p3@Kcnma1 |description=CAGE_peak_3_at_Kcnma1_5end |association_with_transcript=60bp_to_NM_001253358,NM_001253359,N...")
 
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{{FFCP
{{FFCP
|id=chr14:24823340..24823366,-
|DHSsupport=NA
|short_description=p3@Kcnma1
|DPIdataset=NA
|description=CAGE_peak_3_at_Kcnma1_5end
|association_with_transcript=60bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_001253376,NM_001253377,NM_001253378,NM_010610,uc007sme.2,uc007smg.1,uc007smh.1,uc007smi.1,uc011zgw.1,uc011zgx.1,uc011zgy.1,uc011zgz.1,uc011zha.1,uc011zhc.1,uc011zhd.1,uc011zhe.1,uc011zhf.1,uc011zhg.1,uc011zhh.1,uc011zhi.1,uc011zhj.1,uc011zhk.1_5end
|EntrezGene=16531
|EntrezGene=16531
|HGNC=
|HGNC=
|MCL_coexpression_id=1130
|TSSclassifier=NA
|UniProt=Q08460,C3VLD3
|UniProt=Q08460,C3VLD3
|association_with_transcript=60bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_001253376,NM_001253377,NM_001253378,NM_010610,uc007sme.2,uc007smg.1,uc007smh.1,uc007smi.1,uc011zgw.1,uc011zgx.1,uc011zgy.1,uc011zgz.1,uc011zha.1,uc011zhc.1,uc011zhd.1,uc011zhe.1,uc011zhf.1,uc011zhg.1,uc011zhh.1,uc011zhi.1,uc011zhj.1,uc011zhk.1_5end
|cluster_id=chr14:24823340..24823366,-
|description=CAGE_peak_3_at_Kcnma1_5end
|id=chr14:24823340..24823366,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.21e-11!71;UBERON:0003075!5.21e-11!71;UBERON:0007284!5.21e-11!71;UBERON:0004121!1.20e-09!102;UBERON:0000924!1.20e-09!102;UBERON:0006601!1.20e-09!102;UBERON:0000033!2.45e-09!63;UBERON:0002021!2.91e-08!10;UBERON:0000411!2.91e-08!10;UBERON:0001950!2.91e-08!10;UBERON:0000955!3.36e-08!50;UBERON:0006238!3.36e-08!50;UBERON:0001017!4.88e-08!73;UBERON:0005743!4.88e-08!73;UBERON:0001049!5.98e-08!52;UBERON:0005068!5.98e-08!52;UBERON:0006241!5.98e-08!52;UBERON:0007135!5.98e-08!52;UBERON:0002616!1.11e-07!49;UBERON:0000073!1.45e-07!75;UBERON:0001016!1.45e-07!75;UBERON:0003056!4.07e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.52e-10,10;UBERON:0000411,2.52e-10,10;UBERON:0001950,2.52e-10,10;UBERON:0000073,1.83e-09,54;UBERON:0002346,5.12e-09,64;UBERON:0003075,5.12e-09,64;UBERON:0007284,5.12e-09,64;UBERON:0001049,1.19e-08,52;UBERON:0005068,1.19e-08,52;UBERON:0006241,1.19e-08,52;UBERON:0007135,1.19e-08,52;UBERON:0000955,3.60e-08,47;UBERON:0006238,3.60e-08,47;UBERON:0002020,7.18e-08,34;UBERON:0007023,1.34e-07,51;UBERON:0002616,1.50e-07,46;UBERON:0003056,2.77e-07,49;UBERON:0003528,3.18e-07,29;UBERON:0002791,3.18e-07,29;UBERON:0001893,3.18e-07,29;UBERON:0001017,7.72e-07,73
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,0.662605622854841,0.244981598429908,0.0958454710182364,0,1.10115880999389,4.34136949489638,3.5329502648936,1.05509030184155,1.09785172322892,1.56274011167028,1.11673199600552,1.68828783009504,3.51435969886663,1.47314292736834,2.42031857358475,1.3047961207771,0,0.302286240427142,0.869593466105033,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0.776813650941515,16.6255195752604,0.173485326766136,2.43572382649713,0.922461989024234,1.95939432718409,2.70454026412121,5.27799683584637,0,2.60278842455841,0,2.10296904931632,3.75430581382669,2.90925151881133,1.86391761218122,6.14839673724249,7.54008144528438,1.02182822083437,0.11981512450592,0,0,3.14560342750128,10.980014467647,1.13088916901578,12.6891753740362,15.8543583544805,4.77912502486988,9.73447578406546,1.01839363850316,5.22509276562391,2.27450482590307,12.2056276414155,0,0.229902104433473,0.540186389416048,1.20563854268572,1.15662048557257,1.15302348256365,1.3118241438362,4.9153640440413,0,0.378212160335639,0.879755620819744,0.219195732427575,0.278047249225598,2.089512999133,0.823128545631774,0.59710280045548,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,13.4585567081041,0.308713837137853,0.330418782983798,0.793351699990633,0,0.232236671860439,1.54640953586512,2.01683524623343,0.667134131534611,2.09248188723815,0.949058123089023,0.658795818896044,1.25667604400135,1.39269530428806,2.14460495831032,0.898819408654221,1.94524244887225,0.796565093017469,0,0.342745537829186,0,0.407302655690628,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.275936746304732,1.60550589987792,2.10981035865966,0,7.82659874333556,0.631016438832513,0.390438744296638,1.29254038639679,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,17.0300297703558,3.54850213020672,0.178065603667255,0.81443479676788,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.712994756769443,1.26414703174326,0,1.03135543248187,5.7874732978144,0,0.129358683782755,0.428674070063185,0.532020700926821,0,0.822745103010605,0.608929898229199,0,0,2.8668691747145,0.65954501176592,0,0.482503399425247,0.119372344003136,0,1.1659233465194,2.03967832211561,0,0,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,1.62655573701479,3.34816556547584,4.59994251231831,2.83871332870031,5.25970950900801,6.94289028092822,4.97336289769656,1.42576470620972,9.94142900939081,0,0.299033092087958,0.496375471371293,1.36115831840833,1.03327858782185,1.01373675294467,0.469428954583016,1.0416350787516,0.524296722128554,0.724752362478018,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0.360586348559907,0.443068581523732,0.403865799792591,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0.467507608726276,3.85441652145859,0,0,0,7.34120457322324,2.62755465631655,1.46521299413812,2.78678892802786,2.00628841614145,7.34177395402186,10.1271552031579,12.6037012956667,9.10821866421544,15.7568979547248,7.55393897389701,20.2506750069542,18.0128481289688,19.4851235863208,19.6748918465692,0,0.399024873401031,0.341467211508268,0.972426868273176,0,0.183843508450014,1.33348036680969,0.824140228955577,2.88827288632634,2.02157769411038,1.52087579934144,1.50901073108861,1.21733959710847,1.47257850531199,1.60819313075717,3.33405583898152,2.0859178670074,2.50781986602817,1.23625770240992,1.17759136107518,2.05721551431249,1.59728225543404,1.43061713968393,1.30811774969096,1.12931256498397,1.26921911837515,1.64635175585495,1.31534855718921,1.7654534799962,1.68342681497322,1.66089025373844,1.28055827088233,1.22769312950907,1.54936841185966,1.54325288784913,2.24829520144151,1.87145286756327,2.14871054048298,3.25190164517034,2.42650561031467,1.85494268496337
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0.215471232685889,0.760093677825496,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,0.662605622854841,0.244981598429908,0.0958454710182364,0,1.10115880999389,4.34136949489638,3.5329502648936,1.05509030184155,1.09785172322892,1.56274011167028,1.11673199600552,1.68828783009504,3.51435969886663,1.47314292736834,2.42031857358475,1.3047961207771,0,0.302286240427142,0.869593466105033,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0.776813650941515,16.6255195752604,0.173485326766136,2.43572382649713,0.922461989024234,1.95939432718409,2.70454026412121,5.27799683584637,0,2.60278842455841,0,2.10296904931632,3.75430581382669,2.90925151881133,1.86391761218122,6.14839673724249,7.54008144528438,1.02182822083437,0.11981512450592,0,0,3.14560342750128,10.980014467647,1.13088916901578,12.6891753740362,15.8543583544805,4.77912502486988,9.73447578406546,1.01839363850316,5.22509276562391,2.27450482590307,12.2056276414155,0,0.229902104433473,0.540186389416048,1.20563854268572,1.15662048557257,1.15302348256365,1.3118241438362,4.9153640440413,0,0.378212160335639,0.879755620819744,0.219195732427575,0.278047249225598,2.089512999133,0.823128545631774,0.59710280045548,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,13.4585567081041,0.308713837137853,0.330418782983798,0.793351699990633,0,0.232236671860439,1.54640953586512,2.01683524623343,0.667134131534611,2.09248188723815,0.949058123089023,0.658795818896044,1.25667604400135,1.39269530428806,2.14460495831032,0.898819408654221,1.94524244887225,0.796565093017469,0,0.342745537829186,0,0.407302655690628,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0.339490171550376,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.44292937929755,0.478364305972461,0.655453258862952,0.172684981865896,0.144649058581512,0,0,0.983528546038072,0.275936746304732,1.60550589987792,2.10981035865966,0,7.82659874333556,0.631016438832513,0.390438744296638,1.29254038639679,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,17.0300297703558,3.54850213020672,0.178065603667255,0.81443479676788,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.712994756769443,1.26414703174326,0,1.03135543248187,5.7874732978144,0,0.129358683782755,0.428674070063185,0.532020700926821,0,0.822745103010605,0.608929898229199,0,0,2.8668691747145,0.65954501176592,0,0.482503399425247,0.119372344003136,0,1.1659233465194,2.03967832211561,0,0,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,1.62655573701479,3.34816556547584,4.59994251231831,2.83871332870031,5.25970950900801,6.94289028092822,4.97336289769656,1.42576470620972,9.94142900939081,0,0.299033092087958,0.496375471371293,1.36115831840833,1.03327858782185,1.01373675294467,0.469428954583016,1.0416350787516,0.524296722128554,0.724752362478018,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0.360586348559907,0.443068581523732,0.403865799792591,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0.467507608726276,3.85441652145859,0,0,0,7.34120457322324,2.62755465631655,1.46521299413812,2.78678892802786,2.00628841614145,7.34177395402186,10.1271552031579,12.6037012956667,9.10821866421544,15.7568979547248,7.55393897389701,20.2506750069542,18.0128481289688,19.4851235863208,19.6748918465692,0,0.399024873401031,0.341467211508268,0.972426868273176,0,0.183843508450014,1.33348036680969,0.824140228955577,2.88827288632634,2.02157769411038,1.52087579934144,1.50901073108861,1.21733959710847,1.47257850531199,1.60819313075717,3.33405583898152,2.0859178670074,2.50781986602817,1.23625770240992,1.17759136107518,2.05721551431249,1.59728225543404,1.43061713968393,1.30811774969096,1.12931256498397,1.26921911837515,1.64635175585495,1.31534855718921,1.7654534799962,1.68342681497322,1.66089025373844,1.28055827088233,1.22769312950907,1.54936841185966,1.54325288784913,2.24829520144151,1.87145286756327,2.14871054048298,3.25190164517034,2.42650561031467,1.85494268496337
|short_description=p3@Kcnma1
}}
}}

Latest revision as of 19:32, 25 September 2015

Short description:p3@Kcnma1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Kcnma1_5end
Coexpression cluster:MCL_coexpression_mm9:1130
Association with transcript: 60bp_to_NM_001253358, NM_001253359, NM_001253360, NM_001253361, NM_001253362, NM_001253363, NM_001253364, NM_001253365, NM_001253366, NM_001253367, NM_001253368, NM_001253369, NM_001253370, NM_001253371, NM_001253372, NM_001253373, NM_001253374, NM_001253375, NM_001253376, NM_001253377, NM_001253378, NM_010610, uc007sme.2, uc007smg.1, uc007smh.1, uc007smi.1, uc011zgw.1, uc011zgx.1, uc011zgy.1, uc011zgz.1, uc011zha.1, uc011zhc.1, uc011zhd.1, uc011zhe.1, uc011zhf.1, uc011zhg.1, uc011zhh.1, uc011zhi.1, uc011zhj.1, uc011zhk.1_5end
EntrezGene:Kcnma1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Kcnma1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D716.63
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D512.69
cortex, neonate N30.CNhs11107.1392-42F215.85
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A96.94
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.34
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe2.52e-1010
visual cortex2.52e-1010
neocortex2.52e-1010
regional part of nervous system1.83e-0954
neurectoderm5.12e-0964
neural plate5.12e-0964
presumptive neural plate5.12e-0964
neural tube1.19e-0852
neural rod1.19e-0852
future spinal cord1.19e-0852
neural keel1.19e-0852
brain3.60e-0847
future brain3.60e-0847
gray matter7.18e-0834
adult organism1.34e-0751
regional part of brain1.50e-0746
pre-chordal neural plate2.77e-0749
brain grey matter3.18e-0729
regional part of telencephalon3.18e-0729
telencephalon3.18e-0729
central nervous system7.72e-0773
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