FFCP PHASE1:Mm9::chr15:80453772..80453784,+: Difference between revisions
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|id=chr15:80453772..80453784,+
|short_description=p8@Grap2
|description=CAGE_peak_8_at_Grap2_5end
|association_with_transcript=-128bp_to_NM_010815,uc007wvq.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17444 | |EntrezGene=17444 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=O89100,Q3U0E8 | |UniProt=O89100,Q3U0E8 | ||
|association_with_transcript=-128bp_to_NM_010815,uc007wvq.1_5end | |||
|cluster_id=chr15:80453772..80453784,+ | |||
|description=CAGE_peak_8_at_Grap2_5end | |||
|id=chr15:80453772..80453784,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.72e-15!6;CL:0000556!1.72e-15!6;CL:0000050!4.74e-10!9;CL:0002027!3.06e-08!3;CL:0002006!3.06e-08!3;CL:0002024!3.06e-08!3;CL:0000414!4.53e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.91e-28,6;CL:0000556,1.91e-28,6;CL:0000050,5.28e-19,9;CL:0000839,3.60e-13,13;CL:0000763,1.06e-10,16;CL:0002027,1.03e-09,3;CL:0002006,1.03e-09,3;CL:0002024,1.03e-09,3;CL:0002031,1.22e-09,25;CL:0000049,5.28e-09,19;CL:0000945,2.54e-08,1;CL:0000236,2.54e-08,1;CL:0000826,2.54e-08,1;CL:0000988,1.85e-07,32;CL:0002032,1.85e-07,32;CL:0000037,1.85e-07,32;CL:0000837,1.85e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.77e-12!48;UBERON:0002390!9.41e-09!45;UBERON:0003061!9.41e-09!45;UBERON:0002405!4.15e-08!70;UBERON:0002465!4.50e-08!3;UBERON:0002106!2.83e-07!6;UBERON:0004457!2.83e-07!6;UBERON:0000042!2.83e-07!6;UBERON:0004854!2.83e-07!6;UBERON:0009034!2.83e-07!6;UBERON:0002095!2.83e-07!6;UBERON:0004782!2.83e-07!6;UBERON:0003281!2.83e-07!6;UBERON:0009664!2.83e-07!6;UBERON:0002296!2.83e-07!6;UBERON:0005602!2.83e-07!6;UBERON:0001179!2.83e-07!6;UBERON:0006293!2.83e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.00e-18,6;UBERON:0004457,2.00e-18,6;UBERON:0000042,2.00e-18,6;UBERON:0004854,2.00e-18,6;UBERON:0009034,2.00e-18,6;UBERON:0002095,2.00e-18,6;UBERON:0004782,2.00e-18,6;UBERON:0003281,2.00e-18,6;UBERON:0009664,2.00e-18,6;UBERON:0002296,2.00e-18,6;UBERON:0005602,2.00e-18,6;UBERON:0001179,2.00e-18,6;UBERON:0006293,2.00e-18,6;UBERON:0002193,2.52e-13,48;UBERON:0002405,2.52e-13,48;UBERON:0002390,1.88e-11,45;UBERON:0003061,1.88e-11,45;UBERON:0003887,3.51e-11,10;UBERON:0002371,1.06e-10,16;UBERON:0002075,7.24e-09,19;UBERON:0000029,1.84e-08,1;UBERON:0001097,1.84e-08,1;UBERON:0003968,1.84e-08,1;UBERON:0001467,1.84e-08,1;UBERON:0001474,9.12e-08,22;UBERON:0004765,9.12e-08,22;UBERON:0001434,9.12e-08,22;UBERON:0000945,4.52e-07,16;UBERON:0010039,4.52e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.33243904726265,1.41732687172878,0.699561878128147,11.3566379528966,13.8485577941796,5.51706547337439,0,0,0,0.95995453676044,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,11.6522047641227,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,1.14704320301017,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,2.22132145037209,0,0,1.88368457004691,5.87785179200408,5.94823250336959,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,1.33243904726265,1.41732687172878,0.699561878128147,11.3566379528966,13.8485577941796,5.51706547337439,0,0,0,0.95995453676044,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.38913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,11.6522047641227,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0.159454768657487,1.14704320301017,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,2.22132145037209,0,0,1.88368457004691,5.87785179200408,5.94823250336959,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p8@Grap2 | |||
}} | }} |
Latest revision as of 03:48, 27 September 2015
Short description: | p8@Grap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Grap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -128bp_to_NM_010815, uc007wvq.1_5end |
EntrezGene: | Grap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.91e-28 | 6 |
megakaryocyte | 1.91e-28 | 6 |
megakaryocyte-erythroid progenitor cell | 5.28e-19 | 9 |
myeloid lineage restricted progenitor cell | 3.60e-13 | 13 |
myeloid cell | 1.06e-10 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.03e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.03e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.03e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 1.22e-09 | 25 |
common myeloid progenitor | 5.28e-09 | 19 |
lymphocyte of B lineage | 2.54e-08 | 1 |
B cell | 2.54e-08 | 1 |
pro-B cell | 2.54e-08 | 1 |
hematopoietic cell | 1.85e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.85e-07 | 32 |
hematopoietic stem cell | 1.85e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.85e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.00e-18 | 6 |
cavity lining | 2.00e-18 | 6 |
serous membrane | 2.00e-18 | 6 |
gastrointestinal system mesentery | 2.00e-18 | 6 |
stomach region | 2.00e-18 | 6 |
mesentery | 2.00e-18 | 6 |
gastrointestinal system serosa | 2.00e-18 | 6 |
mesentery of stomach | 2.00e-18 | 6 |
gut mesentery | 2.00e-18 | 6 |
dorsal mesentery | 2.00e-18 | 6 |
dorsal mesogastrium | 2.00e-18 | 6 |
peritoneal cavity | 2.00e-18 | 6 |
spleen primordium | 2.00e-18 | 6 |
hemolymphoid system | 2.52e-13 | 48 |
immune system | 2.52e-13 | 48 |
hematopoietic system | 1.88e-11 | 45 |
blood island | 1.88e-11 | 45 |
intraembryonic coelom | 3.51e-11 | 10 |
bone marrow | 1.06e-10 | 16 |
viscus | 7.24e-09 | 19 |
lymph node | 1.84e-08 | 1 |
axillary lymph node | 1.84e-08 | 1 |
peripheral lymph node | 1.84e-08 | 1 |
shoulder | 1.84e-08 | 1 |
bone element | 9.12e-08 | 22 |
skeletal element | 9.12e-08 | 22 |
skeletal system | 9.12e-08 | 22 |
stomach | 4.52e-07 | 16 |
food storage organ | 4.52e-07 | 16 |