FFCP PHASE1:Mm9::chr17:8533213..8533234,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:8533213..8533234,+
|short_description=p4@Prr18
|description=CAGE_peak_4_at_Prr18_5end
|association_with_transcript=-36bp_to_ENSMUST00000069742,NR_028280,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=320111 | |EntrezGene=320111 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PAN7 | |UniProt=Q6PAN7 | ||
|association_with_transcript=-36bp_to_ENSMUST00000069742,NR_028280,uc008ajo.1_5end | |||
|cluster_id=chr17:8533213..8533234,+ | |||
|description=CAGE_peak_4_at_Prr18_5end | |||
|id=chr17:8533213..8533234,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.06e-14!23;CL:0000337!6.06e-14!23;CL:0000540!1.63e-08!33;CL:0000047!1.63e-08!33;CL:0000031!1.63e-08!33;CL:0000404!1.63e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-08,23;CL:0000337,2.17e-08,23;CL:0002613,4.50e-08,3;CL:0000120,2.34e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.49e-14!14;UBERON:0000117!3.49e-14!14;UBERON:0000171!3.49e-14!14;UBERON:0000170!3.49e-14!14;UBERON:0005597!3.49e-14!14;UBERON:0000118!3.49e-14!14;UBERON:0005153!8.96e-11!17;UBERON:0005178!8.96e-11!17;UBERON:0005181!8.96e-11!17;UBERON:0002224!8.96e-11!17;UBERON:0000915!8.96e-11!17;UBERON:0008947!8.96e-11!17;UBERON:0003258!8.96e-11!17;UBERON:0001049!1.29e-08!52;UBERON:0005068!1.29e-08!52;UBERON:0006241!1.29e-08!52;UBERON:0007135!1.29e-08!52;UBERON:0002020!3.46e-08!34;UBERON:0001017!4.79e-08!73;UBERON:0005743!4.79e-08!73;UBERON:0000955!7.22e-08!50;UBERON:0006238!7.22e-08!50;UBERON:0000025!1.09e-07!114;UBERON:0000073!1.48e-07!75;UBERON:0001016!1.48e-07!75;UBERON:0002616!1.64e-07!49;UBERON:0002791!7.74e-07!29;UBERON:0003528!7.74e-07!29;UBERON:0001893!7.74e-07!29;UBERON:0004111!9.85e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.09e-20,14;UBERON:0000117,2.09e-20,14;UBERON:0000171,2.09e-20,14;UBERON:0000170,2.09e-20,14;UBERON:0005597,2.09e-20,14;UBERON:0000118,2.09e-20,14;UBERON:0005153,2.34e-16,17;UBERON:0005178,2.34e-16,17;UBERON:0005181,2.34e-16,17;UBERON:0002224,2.34e-16,17;UBERON:0000915,2.34e-16,17;UBERON:0008947,2.34e-16,17;UBERON:0003258,2.34e-16,17;UBERON:0005157,1.58e-13,20;UBERON:0000369,7.45e-08,5;UBERON:0002435,7.45e-08,5;UBERON:0000204,7.45e-08,5;UBERON:0010082,7.45e-08,5;UBERON:0002420,2.62e-07,8;UBERON:0007245,2.62e-07,8;UBERON:0010009,2.62e-07,8;UBERON:0010011,2.62e-07,8;UBERON:0000454,2.62e-07,8;UBERON:0000025,6.54e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.210324961351382,0,0.662605622854841,0.979926393719632,0.766763768145891,1.83843757322004,0,2.17068474744819,0.921639199537461,3.03338461779446,2.56165402086747,2.6045668527838,2.51264699101243,0.56276261003168,0.916789486660861,0.294628585473668,0.142371680799103,1.67759501242771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.3481157546434,0,1.13088916901578,0.347648640384553,0,0.20778804455956,0.811206315338788,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07309360559848,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,8.12914036733061,0.189491411770485,0.814824882210129,0.848725428875941,1.17345124144251,4.02015017860358,9.75978927632656,8.39074685788535,4.09851374676097,1.10732344824387,3.98636921643718,5.73521601505083,5.00786447411097,5.20736610893442,0,0,0,0,2.40825884981688,3.16471553798949,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,3.12268187458191,0,0,3.95928295134085,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.919217542250071,0.888986911206461,0.824140228955577,0,0.758091635291392,1.2673964994512,0.754505365544305,0.842773567228942,0.89635213366817,1.09127391015665,1.42888107384922,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,1.0174249164263,0.564656282491984,0.507687647350059,1.09756783723664,0.263069711437843,0.679020569229309,1.68342681497322,0.949080144993393,1.28055827088233,0.409231043169689,0.929621047115796,0.578719832943424,1.99848462350357,0.701794825336225,0.859484216193193,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.210324961351382,0,0.662605622854841,0.979926393719632,0.766763768145891,1.83843757322004,0,2.17068474744819,0.921639199537461,3.03338461779446,2.56165402086747,2.6045668527838,2.51264699101243,0.56276261003168,0.916789486660861,0.294628585473668,0.142371680799103,1.67759501242771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,1.3481157546434,0,1.13088916901578,0.347648640384553,0,0.20778804455956,0.811206315338788,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07309360559848,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,8.12914036733061,0.189491411770485,0.814824882210129,0.848725428875941,1.17345124144251,4.02015017860358,9.75978927632656,8.39074685788535,4.09851374676097,1.10732344824387,3.98636921643718,5.73521601505083,5.00786447411097,5.20736610893442,0,0,0,0,2.40825884981688,3.16471553798949,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,3.12268187458191,0,0,3.95928295134085,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.919217542250071,0.888986911206461,0.824140228955577,0,0.758091635291392,1.2673964994512,0.754505365544305,0.842773567228942,0.89635213366817,1.09127391015665,1.42888107384922,1.0429589335037,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,1.0174249164263,0.564656282491984,0.507687647350059,1.09756783723664,0.263069711437843,0.679020569229309,1.68342681497322,0.949080144993393,1.28055827088233,0.409231043169689,0.929621047115796,0.578719832943424,1.99848462350357,0.701794825336225,0.859484216193193,0,0,0 | ||
|short_description=p4@Prr18 | |||
}} | }} |
Latest revision as of 23:28, 26 September 2015
Short description: | p4@Prr18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prr18_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | -36bp_to_ENSMUST00000069742, NR_028280, uc008ajo.1_5end |
EntrezGene: | Prr18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.17e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-08 | 23 |
striatum neuron | 4.50e-08 | 3 |
granule cell | 2.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 2.09e-20 | 14 |
respiratory tube | 2.09e-20 | 14 |
respiration organ | 2.09e-20 | 14 |
pair of lungs | 2.09e-20 | 14 |
lung primordium | 2.09e-20 | 14 |
lung bud | 2.09e-20 | 14 |
epithelial bud | 2.34e-16 | 17 |
thoracic cavity element | 2.34e-16 | 17 |
thoracic segment organ | 2.34e-16 | 17 |
thoracic cavity | 2.34e-16 | 17 |
thoracic segment of trunk | 2.34e-16 | 17 |
respiratory primordium | 2.34e-16 | 17 |
endoderm of foregut | 2.34e-16 | 17 |
epithelial fold | 1.58e-13 | 20 |
corpus striatum | 7.45e-08 | 5 |
striatum | 7.45e-08 | 5 |
ventral part of telencephalon | 7.45e-08 | 5 |
future corpus striatum | 7.45e-08 | 5 |
basal ganglion | 2.62e-07 | 8 |
nuclear complex of neuraxis | 2.62e-07 | 8 |
aggregate regional part of brain | 2.62e-07 | 8 |
collection of basal ganglia | 2.62e-07 | 8 |
cerebral subcortex | 2.62e-07 | 8 |
tube | 6.54e-07 | 114 |