FFCP PHASE1:Mm9::chr19:55985121..55985142,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:55985121..55985142,+
|short_description=p@chr19:55985121..55985142,+
|description=CAGE_peak_at_chr19:55985121..55985142,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:55985121..55985142,+ | |||
|description=CAGE_peak_at_chr19:55985121..55985142,+ | |||
|id=chr19:55985121..55985142,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.70e-20,23;CL:0000337,2.70e-20,23;CL:0002613,1.96e-19,3;CL:0000120,1.36e-18,3;CL:0002610,3.06e-18,3;CL:0000540,7.55e-14,33;CL:0000047,7.55e-14,33;CL:0000031,7.55e-14,33;CL:0000404,7.55e-14,33;CL:0002319,8.24e-13,43;CL:0000221,1.72e-12,44;CL:0000133,1.72e-12,44;CL:0000393,1.47e-11,39;CL:0000211,1.47e-11,39;CL:0002321,2.19e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.06e-18,3;UBERON:0002275,3.06e-18,3;UBERON:0000369,6.79e-12,5;UBERON:0002435,6.79e-12,5;UBERON:0000204,6.79e-12,5;UBERON:0010082,6.79e-12,5;UBERON:0001017,2.25e-10,73;UBERON:0001016,4.68e-10,75;UBERON:0000073,5.74e-08,54;UBERON:0002420,1.28e-07,8;UBERON:0007245,1.28e-07,8;UBERON:0010009,1.28e-07,8;UBERON:0010011,1.28e-07,8;UBERON:0000454,1.28e-07,8;UBERON:0004121,1.32e-07,95;UBERON:0000924,1.32e-07,95;UBERON:0006601,1.32e-07,95;UBERON:0002259,3.67e-07,1;UBERON:0002314,3.67e-07,1;UBERON:0004061,3.67e-07,1;UBERON:0006777,3.67e-07,1;UBERON:0005882,3.67e-07,1 | |||
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| ||
|short_description=p@chr19:55985121..55985142,+ | |||
}} | }} |
Latest revision as of 09:02, 4 August 2015
Short description: | p@chr19:55985121..55985142, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:55985121..55985142, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.70e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.70e-20 | 23 |
striatum neuron | 1.96e-19 | 3 |
granule cell | 1.36e-18 | 3 |
raphe nuclei neuron | 3.06e-18 | 3 |
neuron | 7.55e-14 | 33 |
neuronal stem cell | 7.55e-14 | 33 |
neuroblast | 7.55e-14 | 33 |
electrically signaling cell | 7.55e-14 | 33 |
neural cell | 8.24e-13 | 43 |
ectodermal cell | 1.72e-12 | 44 |
neurectodermal cell | 1.72e-12 | 44 |
electrically responsive cell | 1.47e-11 | 39 |
electrically active cell | 1.47e-11 | 39 |
embryonic cell | 2.19e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.06e-18 | 3 |
reticular formation | 3.06e-18 | 3 |
corpus striatum | 6.79e-12 | 5 |
striatum | 6.79e-12 | 5 |
ventral part of telencephalon | 6.79e-12 | 5 |
future corpus striatum | 6.79e-12 | 5 |
central nervous system | 2.25e-10 | 73 |
nervous system | 4.68e-10 | 75 |
regional part of nervous system | 5.74e-08 | 54 |
basal ganglion | 1.28e-07 | 8 |
nuclear complex of neuraxis | 1.28e-07 | 8 |
aggregate regional part of brain | 1.28e-07 | 8 |
collection of basal ganglia | 1.28e-07 | 8 |
cerebral subcortex | 1.28e-07 | 8 |
ectoderm-derived structure | 1.32e-07 | 95 |
ectoderm | 1.32e-07 | 95 |
presumptive ectoderm | 1.32e-07 | 95 |
corpora quadrigemina | 3.67e-07 | 1 |
midbrain tectum | 3.67e-07 | 1 |
neural tube mantle layer | 3.67e-07 | 1 |
tectal plate | 3.67e-07 | 1 |
neural tube alar plate | 3.67e-07 | 1 |