FFCP PHASE1:Mm9::chr1:51346089..51346123,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:51346089..51346123,+
|short_description=p1@Sdpr
|description=CAGE_peak_1_at_Sdpr_5end
|association_with_transcript=119bp_to_ENSMUST00000051572,NM_138741,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20324 | |EntrezGene=20324 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=860 | |||
|TSSclassifier=NA | |||
|UniProt=Q63918 | |UniProt=Q63918 | ||
|association_with_transcript=119bp_to_ENSMUST00000051572,NM_138741,uc007axk.1_5end | |||
|cluster_id=chr1:51346089..51346123,+ | |||
|description=CAGE_peak_1_at_Sdpr_5end | |||
|id=chr1:51346089..51346123,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.96e-15!23;UBERON:0001009!8.96e-15!23;UBERON:0003914!4.07e-14!47;UBERON:0004872!2.39e-13!33;UBERON:0007100!1.97e-11!18;UBERON:0000948!1.97e-11!18;UBERON:0005498!1.97e-11!18;UBERON:0004140!1.97e-11!18;UBERON:0009881!1.97e-11!18;UBERON:0004141!1.97e-11!18;UBERON:0003084!1.97e-11!18;UBERON:0007005!1.97e-11!18;UBERON:0004139!1.97e-11!18;UBERON:0004291!1.97e-11!18;UBERON:0002100!4.09e-10!98;UBERON:0005177!1.56e-09!85;UBERON:0001048!2.31e-09!147;UBERON:0005153!1.21e-08!17;UBERON:0009569!2.10e-08!66;UBERON:0002048!4.03e-08!14;UBERON:0000117!4.03e-08!14;UBERON:0000171!4.03e-08!14;UBERON:0000170!4.03e-08!14;UBERON:0005597!4.03e-08!14;UBERON:0000118!4.03e-08!14;UBERON:0000466!4.74e-08!79;UBERON:0000926!5.84e-08!193;UBERON:0004120!5.84e-08!193;UBERON:0006603!5.84e-08!193;UBERON:0003104!3.04e-07!131;UBERON:0009142!3.04e-07!131;UBERON:0005178!3.96e-07!17;UBERON:0005181!3.96e-07!17;UBERON:0002224!3.96e-07!17;UBERON:0000915!3.96e-07!17;UBERON:0008947!3.96e-07!17;UBERON:0003258!3.96e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.03e-15,23;UBERON:0001009,8.03e-15,23;UBERON:0003914,3.67e-14,47;UBERON:0004872,2.17e-13,33;UBERON:0002100,2.16e-12,90;UBERON:0005177,1.72e-11,79;UBERON:0007100,1.81e-11,18;UBERON:0000948,1.81e-11,18;UBERON:0005498,1.81e-11,18;UBERON:0004140,1.81e-11,18;UBERON:0009881,1.81e-11,18;UBERON:0004141,1.81e-11,18;UBERON:0003084,1.81e-11,18;UBERON:0007005,1.81e-11,18;UBERON:0004139,1.81e-11,18;UBERON:0004291,1.81e-11,18;UBERON:0005153,1.14e-08,17;UBERON:0009569,1.98e-08,66;UBERON:0002048,3.82e-08,14;UBERON:0000117,3.82e-08,14;UBERON:0000171,3.82e-08,14;UBERON:0000170,3.82e-08,14;UBERON:0005597,3.82e-08,14;UBERON:0000118,3.82e-08,14;UBERON:0005178,3.78e-07,17;UBERON:0005181,3.78e-07,17;UBERON:0002224,3.78e-07,17;UBERON:0000915,3.78e-07,17;UBERON:0008947,3.78e-07,17;UBERON:0003258,3.78e-07,17;UBERON:0001048,6.18e-07,134;UBERON:0005157,9.73e-07,20 | |||
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| ||
|short_description=p1@Sdpr | |||
}} | }} |
Latest revision as of 04:49, 27 September 2015
Short description: | p1@Sdpr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sdpr_5end |
Coexpression cluster: | MCL_coexpression_mm9:860 |
Association with transcript: | 119bp_to_ENSMUST00000051572, NM_138741, uc007axk.1_5end |
EntrezGene: | Sdpr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.03e-15 | 23 |
circulatory system | 8.03e-15 | 23 |
epithelial tube | 3.67e-14 | 47 |
splanchnic layer of lateral plate mesoderm | 2.17e-13 | 33 |
trunk | 2.16e-12 | 90 |
trunk region element | 1.72e-11 | 79 |
primary circulatory organ | 1.81e-11 | 18 |
heart | 1.81e-11 | 18 |
primitive heart tube | 1.81e-11 | 18 |
primary heart field | 1.81e-11 | 18 |
anterior lateral plate mesoderm | 1.81e-11 | 18 |
heart tube | 1.81e-11 | 18 |
heart primordium | 1.81e-11 | 18 |
cardiac mesoderm | 1.81e-11 | 18 |
cardiogenic plate | 1.81e-11 | 18 |
heart rudiment | 1.81e-11 | 18 |
epithelial bud | 1.14e-08 | 17 |
subdivision of trunk | 1.98e-08 | 66 |
lung | 3.82e-08 | 14 |
respiratory tube | 3.82e-08 | 14 |
respiration organ | 3.82e-08 | 14 |
pair of lungs | 3.82e-08 | 14 |
lung primordium | 3.82e-08 | 14 |
lung bud | 3.82e-08 | 14 |
thoracic cavity element | 3.78e-07 | 17 |
thoracic segment organ | 3.78e-07 | 17 |
thoracic cavity | 3.78e-07 | 17 |
thoracic segment of trunk | 3.78e-07 | 17 |
respiratory primordium | 3.78e-07 | 17 |
endoderm of foregut | 3.78e-07 | 17 |
primordium | 6.18e-07 | 134 |
epithelial fold | 9.73e-07 | 20 |