FFCP PHASE2:Hg19::chr2:24149977..24150007,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:54454 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:29230 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=54454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=29230 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9ULI0 | ||
|association_with_transcript=0bp_to_ENST00000238789_5end | |association_with_transcript=0bp_to_ENST00000238789_5end | ||
|cluster_id=chr2:24149977..24150007,- | |cluster_id=chr2:24149977..24150007,- | ||
Latest revision as of 07:52, 16 September 2015
| Short description: | p2@ATAD2B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_ATAD2B_5end |
| Coexpression cluster: | C4210_granulocyte_Neutrophils_Dendritic_acute_CD4_Eosinophils_CD14 |
| Association with transcript: | 0bp_to_ENST00000238789_5end |
| EntrezGene: | ATAD2B |
| HGNC: | 29230 |
| UniProt: | Q9ULI0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@ATAD2B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.68e-37 | 168 |
| hematopoietic cell | 1.90e-36 | 177 |
| hematopoietic oligopotent progenitor cell | 1.58e-33 | 161 |
| hematopoietic multipotent progenitor cell | 1.58e-33 | 161 |
| leukocyte | 1.01e-30 | 136 |
| hematopoietic lineage restricted progenitor cell | 1.81e-23 | 120 |
| nongranular leukocyte | 1.89e-22 | 115 |
| myeloid cell | 3.23e-20 | 108 |
| common myeloid progenitor | 3.23e-20 | 108 |
| myeloid leukocyte | 1.32e-12 | 72 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 4.05e-17 | 114 |
| hematopoietic system | 1.71e-14 | 98 |
| blood island | 1.71e-14 | 98 |
| hemolymphoid system | 1.90e-13 | 108 |
| immune system | 1.34e-09 | 93 |
| bone element | 8.11e-09 | 82 |
| bone marrow | 9.05e-09 | 76 |
| neural tube | 6.85e-08 | 56 |
| neural rod | 6.85e-08 | 56 |
| future spinal cord | 6.85e-08 | 56 |
Showing 1 to 10 of 13 entries
