FFCP PHASE1:Mm9::chr1:99873715..99873779,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:99873715..99873779,-
|short_description=p1@Pam
|description=CAGE_peak_1_at_Pam_5end
|association_with_transcript=33bp_to_ENSMUST00000167040_5end
|EntrezGe...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18484 | |EntrezGene=18484 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=A1L331 | |UniProt=A1L331 | ||
|association_with_transcript=33bp_to_ENSMUST00000167040_5end | |||
|cluster_id=chr1:99873715..99873779,- | |||
|description=CAGE_peak_1_at_Pam_5end | |||
|id=chr1:99873715..99873779,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.81e-17!114;UBERON:0004111!5.61e-17!122;UBERON:0004535!1.54e-15!23;UBERON:0001009!1.54e-15!23;UBERON:0007100!4.90e-13!18;UBERON:0000948!4.90e-13!18;UBERON:0005498!4.90e-13!18;UBERON:0004140!4.90e-13!18;UBERON:0009881!4.90e-13!18;UBERON:0004141!4.90e-13!18;UBERON:0003084!4.90e-13!18;UBERON:0007005!4.90e-13!18;UBERON:0004139!4.90e-13!18;UBERON:0004291!4.90e-13!18;UBERON:0004872!1.67e-09!33;UBERON:0000468!8.95e-09!333;UBERON:0003914!1.17e-07!47;UBERON:0005178!3.25e-07!17;UBERON:0005181!3.25e-07!17;UBERON:0002224!3.25e-07!17;UBERON:0000915!3.25e-07!17;UBERON:0008947!3.25e-07!17;UBERON:0003258!3.25e-07!17;UBERON:0000955!4.81e-07!50;UBERON:0006238!4.81e-07!50;UBERON:0004121!6.36e-07!102;UBERON:0000924!6.36e-07!102;UBERON:0006601!6.36e-07!102;UBERON:0003080!7.37e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.26e-17,114;UBERON:0004111,7.58e-17,122;UBERON:0004535,1.30e-15,23;UBERON:0001009,1.30e-15,23;UBERON:0010314,2.10e-14,92;UBERON:0007100,4.26e-13,18;UBERON:0000948,4.26e-13,18;UBERON:0005498,4.26e-13,18;UBERON:0004140,4.26e-13,18;UBERON:0009881,4.26e-13,18;UBERON:0004141,4.26e-13,18;UBERON:0003084,4.26e-13,18;UBERON:0007005,4.26e-13,18;UBERON:0004139,4.26e-13,18;UBERON:0004291,4.26e-13,18;UBERON:0004872,3.20e-09,33;UBERON:0003914,1.77e-07,47;UBERON:0005178,3.04e-07,17;UBERON:0005181,3.04e-07,17;UBERON:0002224,3.04e-07,17;UBERON:0000915,3.04e-07,17;UBERON:0008947,3.04e-07,17;UBERON:0003258,3.04e-07,17;UBERON:0003080,6.91e-07,40 | |||
|phase1_expression=7.20669811971573,0,0,0,0,1.51091344720701,1.86890112476421,0,0,0.234064526321993,0,0,0,0,0,0,0,0.315462165358238,0,0,17.8590909317247,0,0,0.319984845586813,1.14704640533585,0,1.29228598847722,0.215471232685889,0.380046838912748,0.252030129759931,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,30.089339496163,28.7910484663421,62.7729892392951,0,10.4652075062614,17.5748946187577,16.1376816231655,7.69925318939494,7.18762821824858,0.167782606057736,0,0,24.9541652954869,33.8109459127733,224.317360140687,4.65327859977075,6.34789175126439,1.90149421051854,9.14880236586657,5.33576877666684,1.7997994345628,0.988866362566974,2.1314403448383,1.49800055259202,1.92109152660777,11.6132365785495,10.6654691282036,6.73039876324422,2.57085885963423,1.76694832761291,5.02212276781312,3.06705507258356,7.35375029288017,25.3266526298594,9.95961237064464,11.8277030607307,2.90149833006426,3.01909223887952,4.68822033501084,9.21303896704557,29.826418331679,20.4749652020926,2.65165726926301,3.84403538157578,2.79599168737951,4.46784540665786,25.6943304363071,10.4351215932604,10.3250865237766,0.679971333707751,0.539703191637817,1.29955283489534,2.24013443548668,6.03911006566533,3.57903677413921,2.33807404142582,3.18005617059306,0.281686839553361,2.56652954828636,2.54805239706646,0,10.8245520505607,15.2015919285059,9.60496445528088,4.33898742932428,0.776813650941515,18.2583831049734,5.72501578328248,7.00270600117925,8.99400439298628,11.6056433225519,23.4001527200053,8.41966161908826,7.91023896749996,40.921618008335,1.76922110389975,3.39710384889559,3.3126227769059,0.484875253135222,7.45567044872489,1.17112318804619,1.67557365450764,2.81002760729451,0,0,0.381210681219194,15.5782264981016,11.4375150704657,2.26177833803156,21.5542157038423,19.6900902144355,9.76603809429932,12.0058534670141,6.51771928642024,1.49288364732112,0.252722758433675,12.2056276414155,1.43132487258974,3.44853156650209,5.76198815377118,5.87748789559289,7.14383241088942,4.35586648968489,5.62210347358373,11.1242449417777,1.07783996466421,1.70195472151037,1.93546236580344,1.7535658594206,2.50242524303038,3.1342694986995,3.49829631893504,5.57295947091781,0,0,0,175.43552933757,153.614569287618,202.389757082181,239.112182941062,277.044038300345,295.267254066442,341.359830893599,375.582761959467,496.019174375736,305.91676098916,211.119358805716,303.1973477015,313.745173014763,385.969102681667,444.223246096831,16.4026159880019,6.99751364179134,0.330418782983798,0.264450566663544,4.05247676016945,2.78684006232526,3.47942145569652,3.42861991859682,2.66853652613844,2.09248188723815,1.42358718463353,2.79988223030818,4.27269854960458,2.98434708061726,3.31438948102504,3.59527763461689,2.37751854862164,3.38540164532424,0.948339504765408,2.51346727741403,0,8.96065842519383,1.55161989734101,2.31448205638051,3.47800954183415,2.21415221969403,2.19798218977925,2.71473760627961,2.96452627087149,9.17648081438517,2.55526693647164,3.37293168577281,2.84004169943904,1.4470629585145,3.56476192493988,9.49397253587675,7.7824908852017,6.04035109013779,7.18841032636773,8.55924179637558,8.7370548472077,6.81962970457202,4.12614051100398,3.85954817090694,26.4197061938245,21.4125295300648,9.61493361007953,13.5796068620151,3.05097322775053,15.0755631697634,23.3282768068293,30.8311163615322,15.9211495547253,20.8176808269848,28.3829488210327,17.533374674584,24.5212674249572,21.8420078458082,1.50791283939272,4.89515115436839,0.491764273019036,3.03530420935206,6.90367536947505,8.79087649441524,1.3114795630134,6.5642441073137,6.31016438832513,5.0757036758563,3.87762115919038,10.5146271099123,11.1399337041197,8.77537245445381,6.47697122679831,10.8134667427185,11.0680577825027,19.2792789853084,7.38088443082997,5.34196811001766,9.12166972380026,4.12425307431339,2.65490276679926,6.5550771761845,6.34879469625977,4.52652191414155,6.20133975049623,5.53383266299069,10.0787034335606,11.6330793432802,7.48644494607915,5.37262488490887,3.16255825724996,3.09406629744561,66.7261627277424,1.08036656418786,2.06973894052407,3.00071849044229,3.72414490648775,6.0645397984704,7.24015690649332,21.6170113871366,40.3635337869582,30.5038182043901,2.42581237860458,2.30840754118072,3.71368181400583,4.46315644468353,5.252383136138,4.26766339337159,3.20628920292836,8.71498919449395,0.683483523191411,1.03193433981611,1.11116716421827,0.376736914009382,0.546776910884101,1.37266903923914,0.509935289981566,0.419854356970974,0.414599921413271,3.81868247206045,3.95419991976419,4.87966721104437,2.37611749807963,1.67270636811575,3.27543845619266,6.20375993370175,6.77758336947755,12.5642852152334,3.11075935900303,4.97071450469541,0,1.94371509857172,2.15096037594227,4.86127970860119,4.26227417476513,3.8859908862879,7.3935060346825,8.85389816938861,7.54987279865118,1.69108884578204,0.864090018773596,4.10814456816632,5.47358081283443,2.36235201479103,8.83461596249006,2.14832034800978,11.1261558677508,1.08175904567972,1.9199638532695,1.31256384932592,1.21930890648,0.302478555410522,0.38983152295901,0.288635524920988,0.935015217452552,9.06921534460846,0.443971906748129,3.94740969081693,2.85403847818933,8.88672132548076,14.0761856588386,7.50921659495787,7.28852488868824,3.00943262421218,15.8130515932779,18.8733346967943,14.3223878359849,24.9187114398347,21.9226406326606,16.6186657425734,12.1504050041725,11.2580300806055,22.6571204492102,18.6393712230655,1.97195960409936,3.99024873401031,4.95127456686989,5.83456120963906,1.46729213839588,3.12533964365024,10.4455962066759,6.59312183164461,8.98573786857083,8.59170519996911,11.660047794951,7.73367999682912,7.95952813494,9.02754648908657,7.52404643318534,8.09699275181225,8.34367146802959,7.5234595980845,9.89006161927936,9.86232764900462,8.22886205724997,8.87379030796687,6.19934093863034,9.44751708110135,8.84628175904108,8.79991922073436,6.58540702341981,6.83981249738391,6.79020569229309,10.1005608898393,8.06718123244384,9.35792582567853,12.2769312950907,9.45114731234393,6.94463799532109,3.2475375131933,7.01794825336225,10.9584237564632,5.54736162999646,7.0589254118245,6.95603506861264 | |phase1_expression=7.20669811971573,0,0,0,0,1.51091344720701,1.86890112476421,0,0,0.234064526321993,0,0,0,0,0,0,0,0.315462165358238,0,0,17.8590909317247,0,0,0.319984845586813,1.14704640533585,0,1.29228598847722,0.215471232685889,0.380046838912748,0.252030129759931,1.10865255327652,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,30.089339496163,28.7910484663421,62.7729892392951,0,10.4652075062614,17.5748946187577,16.1376816231655,7.69925318939494,7.18762821824858,0.167782606057736,0,0,24.9541652954869,33.8109459127733,224.317360140687,4.65327859977075,6.34789175126439,1.90149421051854,9.14880236586657,5.33576877666684,1.7997994345628,0.988866362566974,2.1314403448383,1.49800055259202,1.92109152660777,11.6132365785495,10.6654691282036,6.73039876324422,2.57085885963423,1.76694832761291,5.02212276781312,3.06705507258356,7.35375029288017,25.3266526298594,9.95961237064464,11.8277030607307,2.90149833006426,3.01909223887952,4.68822033501084,9.21303896704557,29.826418331679,20.4749652020926,2.65165726926301,3.84403538157578,2.79599168737951,4.46784540665786,25.6943304363071,10.4351215932604,10.3250865237766,0.679971333707751,0.539703191637817,1.29955283489534,2.24013443548668,6.03911006566533,3.57903677413921,2.33807404142582,3.18005617059306,0.281686839553361,2.56652954828636,2.54805239706646,0,10.8245520505607,15.2015919285059,9.60496445528088,4.33898742932428,0.776813650941515,18.2583831049734,5.72501578328248,7.00270600117925,8.99400439298628,11.6056433225519,23.4001527200053,8.41966161908826,7.91023896749996,40.921618008335,1.76922110389975,3.39710384889559,3.3126227769059,0.484875253135222,7.45567044872489,1.17112318804619,1.67557365450764,2.81002760729451,0,0,0.381210681219194,15.5782264981016,11.4375150704657,2.26177833803156,21.5542157038423,19.6900902144355,9.76603809429932,12.0058534670141,6.51771928642024,1.49288364732112,0.252722758433675,12.2056276414155,1.43132487258974,3.44853156650209,5.76198815377118,5.87748789559289,7.14383241088942,4.35586648968489,5.62210347358373,11.1242449417777,1.07783996466421,1.70195472151037,1.93546236580344,1.7535658594206,2.50242524303038,3.1342694986995,3.49829631893504,5.57295947091781,0,0,0,175.43552933757,153.614569287618,202.389757082181,239.112182941062,277.044038300345,295.267254066442,341.359830893599,375.582761959467,496.019174375736,305.91676098916,211.119358805716,303.1973477015,313.745173014763,385.969102681667,444.223246096831,16.4026159880019,6.99751364179134,0.330418782983798,0.264450566663544,4.05247676016945,2.78684006232526,3.47942145569652,3.42861991859682,2.66853652613844,2.09248188723815,1.42358718463353,2.79988223030818,4.27269854960458,2.98434708061726,3.31438948102504,3.59527763461689,2.37751854862164,3.38540164532424,0.948339504765408,2.51346727741403,0,8.96065842519383,1.55161989734101,2.31448205638051,3.47800954183415,2.21415221969403,2.19798218977925,2.71473760627961,2.96452627087149,9.17648081438517,2.55526693647164,3.37293168577281,2.84004169943904,1.4470629585145,3.56476192493988,9.49397253587675,7.7824908852017,6.04035109013779,7.18841032636773,8.55924179637558,8.7370548472077,6.81962970457202,4.12614051100398,3.85954817090694,26.4197061938245,21.4125295300648,9.61493361007953,13.5796068620151,3.05097322775053,15.0755631697634,23.3282768068293,30.8311163615322,15.9211495547253,20.8176808269848,28.3829488210327,17.533374674584,24.5212674249572,21.8420078458082,1.50791283939272,4.89515115436839,0.491764273019036,3.03530420935206,6.90367536947505,8.79087649441524,1.3114795630134,6.5642441073137,6.31016438832513,5.0757036758563,3.87762115919038,10.5146271099123,11.1399337041197,8.77537245445381,6.47697122679831,10.8134667427185,11.0680577825027,19.2792789853084,7.38088443082997,5.34196811001766,9.12166972380026,4.12425307431339,2.65490276679926,6.5550771761845,6.34879469625977,4.52652191414155,6.20133975049623,5.53383266299069,10.0787034335606,11.6330793432802,7.48644494607915,5.37262488490887,3.16255825724996,3.09406629744561,66.7261627277424,1.08036656418786,2.06973894052407,3.00071849044229,3.72414490648775,6.0645397984704,7.24015690649332,21.6170113871366,40.3635337869582,30.5038182043901,2.42581237860458,2.30840754118072,3.71368181400583,4.46315644468353,5.252383136138,4.26766339337159,3.20628920292836,8.71498919449395,0.683483523191411,1.03193433981611,1.11116716421827,0.376736914009382,0.546776910884101,1.37266903923914,0.509935289981566,0.419854356970974,0.414599921413271,3.81868247206045,3.95419991976419,4.87966721104437,2.37611749807963,1.67270636811575,3.27543845619266,6.20375993370175,6.77758336947755,12.5642852152334,3.11075935900303,4.97071450469541,0,1.94371509857172,2.15096037594227,4.86127970860119,4.26227417476513,3.8859908862879,7.3935060346825,8.85389816938861,7.54987279865118,1.69108884578204,0.864090018773596,4.10814456816632,5.47358081283443,2.36235201479103,8.83461596249006,2.14832034800978,11.1261558677508,1.08175904567972,1.9199638532695,1.31256384932592,1.21930890648,0.302478555410522,0.38983152295901,0.288635524920988,0.935015217452552,9.06921534460846,0.443971906748129,3.94740969081693,2.85403847818933,8.88672132548076,14.0761856588386,7.50921659495787,7.28852488868824,3.00943262421218,15.8130515932779,18.8733346967943,14.3223878359849,24.9187114398347,21.9226406326606,16.6186657425734,12.1504050041725,11.2580300806055,22.6571204492102,18.6393712230655,1.97195960409936,3.99024873401031,4.95127456686989,5.83456120963906,1.46729213839588,3.12533964365024,10.4455962066759,6.59312183164461,8.98573786857083,8.59170519996911,11.660047794951,7.73367999682912,7.95952813494,9.02754648908657,7.52404643318534,8.09699275181225,8.34367146802959,7.5234595980845,9.89006161927936,9.86232764900462,8.22886205724997,8.87379030796687,6.19934093863034,9.44751708110135,8.84628175904108,8.79991922073436,6.58540702341981,6.83981249738391,6.79020569229309,10.1005608898393,8.06718123244384,9.35792582567853,12.2769312950907,9.45114731234393,6.94463799532109,3.2475375131933,7.01794825336225,10.9584237564632,5.54736162999646,7.0589254118245,6.95603506861264 | ||
|short_description=p1@Pam | |||
}} | }} |
Latest revision as of 20:47, 1 October 2015
Short description: | p1@Pam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pam_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 33bp_to_ENSMUST00000167040_5end |
EntrezGene: | Pam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 2.26e-17 | 114 |
anatomical conduit | 7.58e-17 | 122 |
cardiovascular system | 1.30e-15 | 23 |
circulatory system | 1.30e-15 | 23 |
structure with developmental contribution from neural crest | 2.10e-14 | 92 |
primary circulatory organ | 4.26e-13 | 18 |
heart | 4.26e-13 | 18 |
primitive heart tube | 4.26e-13 | 18 |
primary heart field | 4.26e-13 | 18 |
anterior lateral plate mesoderm | 4.26e-13 | 18 |
heart tube | 4.26e-13 | 18 |
heart primordium | 4.26e-13 | 18 |
cardiac mesoderm | 4.26e-13 | 18 |
cardiogenic plate | 4.26e-13 | 18 |
heart rudiment | 4.26e-13 | 18 |
splanchnic layer of lateral plate mesoderm | 3.20e-09 | 33 |
epithelial tube | 1.77e-07 | 47 |
thoracic cavity element | 3.04e-07 | 17 |
thoracic segment organ | 3.04e-07 | 17 |
thoracic cavity | 3.04e-07 | 17 |
thoracic segment of trunk | 3.04e-07 | 17 |
respiratory primordium | 3.04e-07 | 17 |
endoderm of foregut | 3.04e-07 | 17 |
anterior neural tube | 6.91e-07 | 40 |