FFCP PHASE1:Mm9::chr3:122432037..122432052,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:122432037..122432052,+
|short_description=p12@Pde5a
|description=CAGE_peak_12_at_Pde5a_5end
|association_with_transcript=-23bp_to_ENSMUST00000066728,NM_153...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=242202 | |EntrezGene=242202 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1453 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CG03 | |UniProt=Q8CG03 | ||
|association_with_transcript=-23bp_to_ENSMUST00000066728,NM_153422,uc008ret.2_5end | |||
|cluster_id=chr3:122432037..122432052,+ | |||
|description=CAGE_peak_12_at_Pde5a_5end | |||
|id=chr3:122432037..122432052,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.21e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!5.64e-11!14;UBERON:0000117!5.64e-11!14;UBERON:0000171!5.64e-11!14;UBERON:0000170!5.64e-11!14;UBERON:0005597!5.64e-11!14;UBERON:0000118!5.64e-11!14;UBERON:0005157!4.57e-09!27;UBERON:0005153!7.09e-09!17;UBERON:0005178!1.10e-07!17;UBERON:0005181!1.10e-07!17;UBERON:0002224!1.10e-07!17;UBERON:0000915!1.10e-07!17;UBERON:0008947!1.10e-07!17;UBERON:0003258!1.10e-07!17;UBERON:0004921!1.36e-07!126;UBERON:0004185!1.36e-07!126;UBERON:0004119!1.89e-07!130;UBERON:0000925!1.89e-07!130;UBERON:0006595!1.89e-07!130;UBERON:0001007!2.05e-07!128;UBERON:0001555!2.05e-07!128;UBERON:0007026!2.05e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.67e-34,14;UBERON:0000117,2.67e-34,14;UBERON:0000171,2.67e-34,14;UBERON:0000170,2.67e-34,14;UBERON:0005597,2.67e-34,14;UBERON:0000118,2.67e-34,14;UBERON:0005157,1.32e-30,20;UBERON:0005153,9.20e-28,17;UBERON:0005178,9.20e-28,17;UBERON:0005181,9.20e-28,17;UBERON:0002224,9.20e-28,17;UBERON:0000915,9.20e-28,17;UBERON:0008947,9.20e-28,17;UBERON:0003258,9.20e-28,17;UBERON:0000310,9.71e-18,6;UBERON:0001443,9.71e-18,6;UBERON:0000065,1.68e-11,41;UBERON:0001004,3.72e-11,42;UBERON:0000013,2.08e-09,3;UBERON:0004921,3.63e-09,114;UBERON:0001007,6.34e-09,116;UBERON:0001555,6.34e-09,116;UBERON:0007026,6.34e-09,116;UBERON:0004119,1.08e-08,118;UBERON:0000925,1.08e-08,118;UBERON:0006595,1.08e-08,118;UBERON:0001041,2.37e-08,80;UBERON:0011216,2.58e-08,194;UBERON:0002410,1.21e-07,9 | |||
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|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0.503637815735669,0.233612640595526,0,0,0,0,0.159544317990673,0,0.262261207256992,0,0,0,0,0.137114433605739,0,0.510259740906419,0,0,0,0.22940928106717,0,0.86152399231815,0.215471232685889,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0,0.452167921657868,0.23517741427141,0.251333182659351,0,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,2.34224637609238,1.25668024088073,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0.520481771850815,0.459804208866946,1.26043490863744,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0,0.431135985865684,0.945530400839096,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0.660837565967596,0,1.91959425481711,2.78684006232526,1.9330119198314,1.00841762311671,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0.597423819763102,0,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0,0.811440485554012,0,0.50925170356284,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,4.35830247072115,3.25929952884052,1.86719594352707,1.40814148973101,2.84760637651087,1.6663054862021,1.36593553500459,4.09851374676097,3.10050565508285,4.30527875375215,1.47476983244164,2.24490476425664,0.578596234326046,0,0,0.491764273019036,0,0,0,0,0,0.94652465824877,1.17131623288992,1.07711698866399,0.955875191810208,0.668396022247182,0.849229592366497,2.42886421004937,1.46127928955656,1.58115111178609,0,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,0,0.63549621259146,0,0,0,0,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.683471138605126,0,0,0,0.414599921413271,0,3.95419991976419,3.04979200690273,0.648032044930808,1.46361807210128,1.09181281873089,0.809186078308924,0.991841468704031,0.523511883968059,0.648074866458964,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0,0.39061315453185,0,0,0,0,0.810900861160657,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.590758108698309,0.706765149637033,0.609654453239999,0.302478555410522,0.487289403698762,1.05833025804362,0.818138315270983,0,0,0.0897138566094757,0,1.9318959403219,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0.682934423016537,0.972426868273176,0.209613162627982,0.735374033800057,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.842773567228942,0.256100609619477,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0.883193520806384,0.342869252385415,0.887379030796687,0.715308569841963,0.436039249896986,0.376437521661322,0.0846146078916765,0,0.789209134313529,0,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p12@Pde5a | |||
}} | }} |
Latest revision as of 13:18, 1 October 2015
Short description: | p12@Pde5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Pde5a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1453 |
Association with transcript: | -23bp_to_ENSMUST00000066728, NM_153422, uc008ret.2_5end |
EntrezGene: | Pde5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung | 2.67e-34 | 14 |
respiratory tube | 2.67e-34 | 14 |
respiration organ | 2.67e-34 | 14 |
pair of lungs | 2.67e-34 | 14 |
lung primordium | 2.67e-34 | 14 |
lung bud | 2.67e-34 | 14 |
epithelial fold | 1.32e-30 | 20 |
epithelial bud | 9.20e-28 | 17 |
thoracic cavity element | 9.20e-28 | 17 |
thoracic segment organ | 9.20e-28 | 17 |
thoracic cavity | 9.20e-28 | 17 |
thoracic segment of trunk | 9.20e-28 | 17 |
respiratory primordium | 9.20e-28 | 17 |
endoderm of foregut | 9.20e-28 | 17 |
breast | 9.71e-18 | 6 |
chest | 9.71e-18 | 6 |
respiratory tract | 1.68e-11 | 41 |
respiratory system | 3.72e-11 | 42 |
sympathetic nervous system | 2.08e-09 | 3 |
subdivision of digestive tract | 3.63e-09 | 114 |
digestive system | 6.34e-09 | 116 |
digestive tract | 6.34e-09 | 116 |
primitive gut | 6.34e-09 | 116 |
endoderm-derived structure | 1.08e-08 | 118 |
endoderm | 1.08e-08 | 118 |
presumptive endoderm | 1.08e-08 | 118 |
foregut | 2.37e-08 | 80 |
organ system subdivision | 2.58e-08 | 194 |
autonomic nervous system | 1.21e-07 | 9 |