FFCP PHASE2:Hg19::chr7:73624327..73624350,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7462 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:12749 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12749 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9GZY6,F8W947 | ||
|association_with_transcript=0bp_to_ENST00000275635,ENST00000361082,ENST00000488266_5end | |association_with_transcript=0bp_to_ENST00000275635,ENST00000361082,ENST00000488266_5end | ||
|cluster_id=chr7:73624327..73624350,+ | |cluster_id=chr7:73624327..73624350,+ | ||
Latest revision as of 11:25, 19 September 2015
| Short description: | p1@LAT2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LAT2_5end |
| Coexpression cluster: | C4697_Eosinophils_Mast_acute_non_CD14_Neutrophils_myelodysplastic |
| Association with transcript: | 0bp_to_ENST00000275635, ENST00000361082, ENST00000488266_5end |
| EntrezGene: | LAT2 |
| HGNC: | 12749 |
| UniProt: | Q9GZY6F8W947 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@LAT2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 1.09e-68 | 168 |
| hematopoietic oligopotent progenitor cell | 3.88e-66 | 161 |
| hematopoietic multipotent progenitor cell | 3.88e-66 | 161 |
| hematopoietic cell | 8.09e-62 | 177 |
| leukocyte | 9.51e-58 | 136 |
| myeloid cell | 1.98e-52 | 108 |
| common myeloid progenitor | 1.98e-52 | 108 |
| hematopoietic lineage restricted progenitor cell | 3.00e-52 | 120 |
| nongranular leukocyte | 2.87e-49 | 115 |
| myeloid leukocyte | 1.88e-47 | 72 |
Showing 1 to 10 of 29 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.24e-44 | 98 |
| blood island | 1.24e-44 | 98 |
| hemolymphoid system | 9.68e-42 | 108 |
| bone marrow | 1.99e-37 | 76 |
| immune system | 5.76e-36 | 93 |
| bone element | 2.17e-33 | 82 |
| skeletal element | 1.49e-27 | 90 |
| adult organism | 9.26e-25 | 114 |
| skeletal system | 1.91e-22 | 100 |
| lateral plate mesoderm | 1.28e-09 | 203 |
Showing 1 to 10 of 20 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 4.93e-10 | 51 |
| immune system cancer | 4.93e-10 | 51 |
| myeloid leukemia | 2.62e-09 | 31 |
| leukemia | 8.92e-09 | 39 |
Showing 1 to 4 of 4 entries
