FFCP PHASE1:Mm9::chr14:24823340..24823366,-: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=16531 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1130 | |MCL_coexpression_id=1130 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q08460,C3VLD3 | ||
|association_with_transcript=60bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_001253376,NM_001253377,NM_001253378,NM_010610,uc007sme.2,uc007smg.1,uc007smh.1,uc007smi.1,uc011zgw.1,uc011zgx.1,uc011zgy.1,uc011zgz.1,uc011zha.1,uc011zhc.1,uc011zhd.1,uc011zhe.1,uc011zhf.1,uc011zhg.1,uc011zhh.1,uc011zhi.1,uc011zhj.1,uc011zhk.1_5end | |association_with_transcript=60bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_001253376,NM_001253377,NM_001253378,NM_010610,uc007sme.2,uc007smg.1,uc007smh.1,uc007smi.1,uc011zgw.1,uc011zgx.1,uc011zgy.1,uc011zgz.1,uc011zha.1,uc011zhc.1,uc011zhd.1,uc011zhe.1,uc011zhf.1,uc011zhg.1,uc011zhh.1,uc011zhi.1,uc011zhj.1,uc011zhk.1_5end | ||
|cluster_id=chr14:24823340..24823366,- | |cluster_id=chr14:24823340..24823366,- |
Latest revision as of 19:32, 25 September 2015
Short description: | p3@Kcnma1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnma1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1130 |
Association with transcript: | 60bp_to_NM_001253358, NM_001253359, NM_001253360, NM_001253361, NM_001253362, NM_001253363, NM_001253364, NM_001253365, NM_001253366, NM_001253367, NM_001253368, NM_001253369, NM_001253370, NM_001253371, NM_001253372, NM_001253373, NM_001253374, NM_001253375, NM_001253376, NM_001253377, NM_001253378, NM_010610, uc007sme.2, uc007smg.1, uc007smh.1, uc007smi.1, uc011zgw.1, uc011zgx.1, uc011zgy.1, uc011zgz.1, uc011zha.1, uc011zhc.1, uc011zhd.1, uc011zhe.1, uc011zhf.1, uc011zhg.1, uc011zhh.1, uc011zhi.1, uc011zhj.1, uc011zhk.1_5end |
EntrezGene: | Kcnma1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.52e-10 | 10 |
visual cortex | 2.52e-10 | 10 |
neocortex | 2.52e-10 | 10 |
regional part of nervous system | 1.83e-09 | 54 |
neurectoderm | 5.12e-09 | 64 |
neural plate | 5.12e-09 | 64 |
presumptive neural plate | 5.12e-09 | 64 |
neural tube | 1.19e-08 | 52 |
neural rod | 1.19e-08 | 52 |
future spinal cord | 1.19e-08 | 52 |
neural keel | 1.19e-08 | 52 |
brain | 3.60e-08 | 47 |
future brain | 3.60e-08 | 47 |
gray matter | 7.18e-08 | 34 |
adult organism | 1.34e-07 | 51 |
regional part of brain | 1.50e-07 | 46 |
pre-chordal neural plate | 2.77e-07 | 49 |
brain grey matter | 3.18e-07 | 29 |
regional part of telencephalon | 3.18e-07 | 29 |
telencephalon | 3.18e-07 | 29 |
central nervous system | 7.72e-07 | 73 |