FFCP PHASE1:Mm9::chr5:137729501..137729520,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:137729501..137729520,+
|short_description=p1@Ache
|description=CAGE_peak_1_at_Ache_5end
|association_with_transcript=0bp_to_ENSMUST00000024099,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11423 | |EntrezGene=11423 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt=P21836,Q543Z1 | |UniProt=P21836,Q543Z1 | ||
|association_with_transcript=0bp_to_ENSMUST00000024099,ENSMUST00000085934,ENSMUST00000150983,NM_009599,uc009abu.1,uc009abv.1,uc009abw.1,uc009abx.1_5end | |||
|cluster_id=chr5:137729501..137729520,+ | |||
|description=CAGE_peak_1_at_Ache_5end | |||
|id=chr5:137729501..137729520,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.03e-11!73;UBERON:0005743!5.03e-11!73;UBERON:0000073!1.80e-10!75;UBERON:0001016!1.80e-10!75;UBERON:0002346!9.19e-10!71;UBERON:0003075!9.19e-10!71;UBERON:0007284!9.19e-10!71;UBERON:0004121!1.47e-09!102;UBERON:0000924!1.47e-09!102;UBERON:0006601!1.47e-09!102;UBERON:0001049!1.12e-08!52;UBERON:0005068!1.12e-08!52;UBERON:0006241!1.12e-08!52;UBERON:0007135!1.12e-08!52;UBERON:0000955!1.08e-07!50;UBERON:0006238!1.08e-07!50;UBERON:0000153!1.81e-07!94;UBERON:0002616!2.50e-07!49;UBERON:0007811!3.53e-07!86;UBERON:0000033!4.06e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.46e-11,73;UBERON:0001016,2.30e-10,75;UBERON:0002346,1.20e-09,64;UBERON:0003075,1.20e-09,64;UBERON:0007284,1.20e-09,64;UBERON:0000073,1.36e-09,54;UBERON:0004121,3.49e-09,95;UBERON:0000924,3.49e-09,95;UBERON:0006601,3.49e-09,95;UBERON:0001049,1.53e-08,52;UBERON:0005068,1.53e-08,52;UBERON:0006241,1.53e-08,52;UBERON:0007135,1.53e-08,52;UBERON:0010371,4.90e-08,73;UBERON:0010314,3.59e-07,92 | |||
|phase1_expression=2.40223270657191,0.348975407639361,1.36499771816861,0,0,2.18243053485457,1.86890112476421,0.387369970324729,0,0.234064526321993,0,0,0,0.0874204024189974,44.3035983214831,50.2138663126768,115.427709891144,1.10411757875383,1.09691546884591,3.39511721438424,12.8415368128115,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.252030129759931,0.665191531965914,6.98533740805594,8.61090702618398,0,0.866554859253824,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0.588231488031014,3.41522742479223,0.971020706062307,0,0,0,7.04152209913235,1.52617609466313,1.5378032791413,2.72201858703997,0.139986421625363,1.43752564364972,0,0.725362142011344,0.336093799142464,0.257259436035947,0.286533439938757,2.06268836910977,20.636279007679,20.1016572123373,21.5502677192101,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,0.622137673850866,1.21505344498522,0.841299845405528,152.537625671631,120.594223359581,1.5923803897944,1.72521847832825,1.83843757322004,124.430945529309,112.620232191136,119.966702473126,17.672762555846,25.9824907830843,15.6274011167028,166.951433402826,150.82037948849,133.851265052486,108.42331945431,95.6737694969972,49.7686520353553,2.19605960666234,2.64500460373749,2.6087803983151,2.58127163094416,0,0.539703191637817,0.649776417447669,0,15.4488862144927,0,0,0,2.25349471642689,0,0,0,0,0,0,5.48082622651488,11.1343289968284,11.7269289861212,6.59244241711316,8.8294988710521,9.4552353874984,7.83757730873637,9.17191915658498,4.14699751387929,3.95511948374998,2.02439099687876,53.9612436689423,32.5151368394292,55.6520626520192,48.4875253135222,3.72783522436244,29.8636412951778,29.3225389538837,2.81002760729451,4.31334448221313,1.79970819298022,2.03312363316904,84.3321299849152,59.0175777636028,21.2355855070741,26.421296669226,26.0829766476937,94.3357722300403,67.9790892253905,3.25885964321012,30.6041147700829,0.505445516867349,13.2578369208479,2.99277018814219,5.0578462975364,7.74267158163002,11.6042709733501,9.5251098811859,7.94305065766069,11.3379086717272,21.7310831420773,2.37124792226126,10.0226222488944,10.0292140773451,11.6173738186615,6.95118123063995,11.8405736617537,8.64284972913362,1.79130840136644,0,0,1.13665399758237,17.3985648929822,15.2441938987713,9.00310307305074,8.99629995223799,5.3126342571799,3.5481435964097,4.18561100550734,3.21928081679543,2.91913355917924,1.48103864922132,3.11918181750281,6.08016071593918,3.36259971078264,4.61055242111206,3.89198614405078,26.9171134162083,9.67303356365274,0.330418782983798,3.17340679996253,2.55945900642281,4.18026009348789,7.21657783403723,5.04208811558356,7.56085349072559,7.03834816616469,2.84717436926707,6.91735609840846,3.77002813200404,6.16765063327568,8.77338392036041,4.49409704327111,2.37751854862164,2.38969527905241,1.13800740571849,3.08470984046268,1.1270773567308,4.88763186828754,7.37019451236978,8.83711330618014,10.2443190141297,8.41377843483732,5.80895293013087,9.74837594982224,0.889357881261447,64.7359010178445,56.4124315974893,64.7602883668379,67.9581406651485,57.6413411808276,31.3189797691146,33.372751944294,24.3202840162553,16.4736847912849,18.6898668485561,7.81495990103857,3.74445207737473,0.252578877947112,1.07638448113147,0.964887042726734,2.40179147216586,4.73728529426212,0.651859905768103,1.52770577197669,0.938760993154008,2.51259386162724,2.38043640886014,2.34160377429359,2.67979744980525,1.55025282754142,5.10255259703959,2.78567635016755,1.89953480052485,1.44649058581512,0,0,0.491764273019036,0.827810238914197,114.15146948132,112.640430815107,0,56.8059586209839,26.5026904309656,20.6932534477218,41.792139160163,5.9742199488138,10.2487390077901,12.1722908239198,15.382806663646,31.5636326544217,31.6230222357219,37.5945940213514,0.283880170416537,6.94455854302295,5.37526965866801,1.64970122972535,0,1.45668381692989,1.81394134178851,0.943025398779491,1.18120757152309,4.61152721915891,4.13485269069154,2.18120237686503,5.70395805415554,4.42451461110142,1.05418608574999,1.03135543248187,21.7881347682424,1.62054984628179,2.45781499187234,2.7863814554107,1.59606210278046,9.27517851530767,10.0374902567294,19.1812917942198,1.87737366450968,13.7690846061483,9.04166432025344,32.1528193235886,5.16686165426898,6.6947346670253,5.01363844813173,3.77524069413641,4.95517422270746,109.586353488211,57.2417450672807,2.68302928352189,14.0747840800981,97.5748607284299,98.4198439591381,72.0651245600546,4.41943917984024,6.43776680688827,5.8043988997858,8.59203556213602,4.58687190692646,8.3360981522008,5.50827238191186,5.64538399239065,6.55087691238533,6.74321731924104,11.1582165229204,4.97336289769656,4.79575401179634,0,0,0.448549638131936,0.992750942742586,0.583353565032143,0.387479470433193,1.18269287843545,1.76035857968631,2.21347454234715,0.419437377702843,0.241584120826006,6.62469014393091,21.4887562027161,56.1548846353755,101.991980464673,75.2241565041433,77.6975859196869,46.6901183735973,38.58273929591,40.7623095001833,31.0976665840295,31.4734111485149,29.8445508005048,28.847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| 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| ||
|short_description=p1@Ache | |||
}} | }} |
Latest revision as of 14:38, 25 September 2015
Short description: | p1@Ache |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ache_5end |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | 0bp_to_ENSMUST00000024099, ENSMUST00000085934, ENSMUST00000150983, NM_009599, uc009abu.1, uc009abv.1, uc009abw.1, uc009abx.1_5end |
EntrezGene: | Ache |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.46e-11 | 73 |
nervous system | 2.30e-10 | 75 |
neurectoderm | 1.20e-09 | 64 |
neural plate | 1.20e-09 | 64 |
presumptive neural plate | 1.20e-09 | 64 |
regional part of nervous system | 1.36e-09 | 54 |
ectoderm-derived structure | 3.49e-09 | 95 |
ectoderm | 3.49e-09 | 95 |
presumptive ectoderm | 3.49e-09 | 95 |
neural tube | 1.53e-08 | 52 |
neural rod | 1.53e-08 | 52 |
future spinal cord | 1.53e-08 | 52 |
neural keel | 1.53e-08 | 52 |
ecto-epithelium | 4.90e-08 | 73 |
structure with developmental contribution from neural crest | 3.59e-07 | 92 |