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FFCP PHASE1:Mm9::chr5:34679613..34679665,+: Difference between revisions

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(Created page with "{{FFCP |id=chr5:34679613..34679665,+ |short_description=p3@Rnf4 |description=CAGE_peak_3_at_Rnf4_5end |association_with_transcript=32bp_to_uc008xcf.1_5end |EntrezGene=198...")
 
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{{FFCP
{{FFCP
|id=chr5:34679613..34679665,+
|DHSsupport=NA
|short_description=p3@Rnf4
|DPIdataset=NA
|description=CAGE_peak_3_at_Rnf4_5end
|association_with_transcript=32bp_to_uc008xcf.1_5end
|EntrezGene=19822
|EntrezGene=19822
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=32bp_to_uc008xcf.1_5end
|cluster_id=chr5:34679613..34679665,+
|description=CAGE_peak_3_at_Rnf4_5end
|id=chr5:34679613..34679665,+
|ontology_enrichment_celltype=CL:0000542!3.31e-08!13;CL:0000051!3.31e-08!13;CL:0000838!1.26e-07!12;CL:0000084!2.93e-07!11;CL:0000827!2.93e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000893,2.47e-17,6;CL:0002489,2.47e-17,6;CL:0000898,2.47e-17,6;CL:0000809,2.47e-17,6;CL:0000810,2.47e-17,6;CL:0000895,2.47e-17,6;CL:0000808,2.47e-17,6;CL:0000894,2.47e-17,6;CL:0000806,2.47e-17,6;CL:0000807,2.47e-17,6;CL:0000805,2.47e-17,6;CL:0002425,2.47e-17,6;CL:0002436,2.47e-17,6;CL:0002427,2.47e-17,6;CL:0002428,2.47e-17,6;CL:0002429,2.47e-17,6;CL:0002433,2.47e-17,6;CL:0002431,2.47e-17,6;CL:0002432,2.47e-17,6;CL:0000542,2.97e-13,13;CL:0000051,2.97e-13,13;CL:0000624,7.55e-13,8;CL:0000084,2.36e-12,11;CL:0000827,2.36e-12,11;CL:0000791,2.37e-11,9;CL:0000789,2.37e-11,9;CL:0002420,2.37e-11,9;CL:0002419,2.37e-11,9;CL:0000790,2.37e-11,9;CL:0000838,3.04e-11,12;CL:0000738,7.68e-10,17;CL:0002087,7.68e-10,17;CL:0002031,4.88e-08,25;CL:0000988,2.49e-07,32;CL:0002032,2.49e-07,32;CL:0000037,2.49e-07,32;CL:0000837,2.49e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.76e-09,23;UBERON:0000974,9.76e-09,23;UBERON:0004807,9.76e-09,23;UBERON:0005058,9.76e-09,23;UBERON:0003351,9.76e-09,23;UBERON:0009113,9.76e-09,23;UBERON:0003295,9.76e-09,23;UBERON:0009722,9.76e-09,23;UBERON:0005562,9.76e-09,23;UBERON:0007690,9.76e-09,23;UBERON:0006562,2.61e-08,24;UBERON:0003408,2.61e-08,24;UBERON:0001557,2.61e-08,24;UBERON:0001042,2.61e-08,24;UBERON:0008814,2.61e-08,24;UBERON:0009145,2.61e-08,24;UBERON:0000072,3.22e-07,27
|phase1_expression=1.12104192973356,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.387369970324729,2.25261955442667,2.10658073689794,1.54096171402954,1.67521533890206,1.54080656938085,1.13646523144697,0,0,0,0.157731082679119,0,0,43.4571212671967,0.893618560807968,1.56719873483361,0,0,0,0,0.430942465371778,0,0,0.221730510655305,1.27006134691926,1.84519436275371,0,2.3108129580102,0.831173226792462,0.816677425049476,0,0,0,0,0,0.485510353031154,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0.671130424230945,0.725362142011344,0.672187598284928,0.257259436035947,0.573066879877513,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0,0,0.220868540951614,0.367472397644862,0,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0.757261933331841,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0.896053774194671,4.91555470461132,0,0,0,0.422530259330042,0,0,0,0.649473123033642,0,0,6.62266502370548,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0.23517741427141,0.125666591329675,1.73036477414062,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0.390361328888111,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0.281105173679186,0.517406741478031,1.29340795759705,0.567318240503458,0.175951124163949,0.876782929710299,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0.938104239924385,0,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0,0.205809224758569,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0.605050573870028,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0,0.502518772325447,0,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0.144649058581512,0,0,0,1.65562047782839,0.160550589987792,0,0.163934945376675,0.252470927204373,0.631016438832513,1.17131623288992,0,0.955875191810208,1.33679204449436,0.283076530788832,0.404810701674894,0.584511715822624,1.58115111178609,0,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.517434735131018,0.643011105094777,1.06404140185364,0.535106452806212,1.48094118541909,0.304464949114599,0,0.847328283455281,0.220528398054962,0.16488625294148,0.161464426695906,0.241251699712623,0.716234064018819,0.164140899745061,0,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0,0.679913719975421,1.53946597556024,0.967399816630967,0,0.632671987162271,0.406638934253697,0.216010681643603,0,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,275.645847016569,0.299033092087958,0.496375471371293,0,0.129159823477731,0.168956125490778,0.352071715937262,0.5208175393758,0.314578033277133,3.62376181239009,135.374102941197,0,1.01362607645082,1.33524244314275,0.51968329191118,0.537080087002444,1.78813219303138,0.240390899039938,0.738447635872886,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0.384847366561318,0.584384510907845,0,0.665957860122194,0.269141569828427,0.671538465456314,0.579568782096571,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0,0,0,0,0.468207537349412,0.320125762024346,0,0,0,0,0,0,0.342869252385415,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0.859484216193193,0.956441660344217,0.441182838239031,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.387369970324729,2.25261955442667,2.10658073689794,1.54096171402954,1.67521533890206,1.54080656938085,1.13646523144697,0,0,0,0.157731082679119,0,0,43.4571212671967,0.893618560807968,1.56719873483361,0,0,0,0,0.430942465371778,0,0,0.221730510655305,1.27006134691926,1.84519436275371,0,2.3108129580102,0.831173226792462,0.816677425049476,0,0,0,0,0,0.485510353031154,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,0.671130424230945,0.725362142011344,0.672187598284928,0.257259436035947,0.573066879877513,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0.311068836925433,0.135005938331691,0,0,0.220868540951614,0.367472397644862,0,0,0,0,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0.757261933331841,0.302286240427142,0.289864488701678,0,0.679971333707751,0,0,0.896053774194671,4.91555470461132,0,0,0,0.422530259330042,0,0,0,0.649473123033642,0,0,6.62266502370548,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0.23517741427141,0.125666591329675,1.73036477414062,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0.390361328888111,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0.281105173679186,0.517406741478031,1.29340795759705,0.567318240503458,0.175951124163949,0.876782929710299,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0.568326998791185,0.414251545071004,0.938104239924385,0,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0,0,0,0.205809224758569,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0.605050573870028,0.22237804384487,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.184753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0,0.502518772325447,0,0.390267295715598,0.315270288212382,0,0,0.163863314715738,0,0.144649058581512,0,0,0,1.65562047782839,0.160550589987792,0,0.163934945376675,0.252470927204373,0.631016438832513,1.17131623288992,0,0.955875191810208,1.33679204449436,0.283076530788832,0.404810701674894,0.584511715822624,1.58115111178609,0,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.36012218806262,0.517434735131018,0.643011105094777,1.06404140185364,0.535106452806212,1.48094118541909,0.304464949114599,0,0.847328283455281,0.220528398054962,0.16488625294148,0.161464426695906,0.241251699712623,0.716234064018819,0.164140899745061,0,0,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0,0.679913719975421,1.53946597556024,0.967399816630967,0,0.632671987162271,0.406638934253697,0.216010681643603,0,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,275.645847016569,0.299033092087958,0.496375471371293,0,0.129159823477731,0.168956125490778,0.352071715937262,0.5208175393758,0.314578033277133,3.62376181239009,135.374102941197,0,1.01362607645082,1.33524244314275,0.51968329191118,0.537080087002444,1.78813219303138,0.240390899039938,0.738447635872886,0.302899349844443,0.0762068066549998,0.201652370273681,0.194915761479505,0.384847366561318,0.584384510907845,0,0.665957860122194,0.269141569828427,0.671538465456314,0.579568782096571,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0,0.367687016900028,0.222246727801615,0,0,0,0,0,0.468207537349412,0.320125762024346,0,0,0,0,0,0,0.342869252385415,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0.859484216193193,0.956441660344217,0.441182838239031,0.231867835620421
|short_description=p3@Rnf4
}}
}}

Latest revision as of 23:30, 25 September 2015

Short description:p3@Rnf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf4_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 32bp_to_uc008xcf.1_5end
EntrezGene:Rnf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5275.65
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E2135.37
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte2.47e-176
double negative thymocyte2.47e-176
naive T cell2.47e-176
double-positive, alpha-beta thymocyte2.47e-176
CD4-positive, alpha-beta thymocyte2.47e-176
naive thymus-derived CD4-positive, alpha-beta T cell2.47e-176
DN4 thymocyte2.47e-176
DN1 thymic pro-T cell2.47e-176
DN2 thymocyte2.47e-176
DN3 thymocyte2.47e-176
immature single positive thymocyte2.47e-176
early T lineage precursor2.47e-176
mature CD4 single-positive thymocyte2.47e-176
resting double-positive thymocyte2.47e-176
double-positive blast2.47e-176
CD69-positive double-positive thymocyte2.47e-176
CD69-positive, CD4-positive single-positive thymocyte2.47e-176
CD4-positive, CD8-intermediate double-positive thymocyte2.47e-176
CD24-positive, CD4 single-positive thymocyte2.47e-176
lymphocyte2.97e-1313
common lymphoid progenitor2.97e-1313
CD4-positive, alpha-beta T cell7.55e-138
T cell2.36e-1211
pro-T cell2.36e-1211
mature alpha-beta T cell2.37e-119
alpha-beta T cell2.37e-119
immature T cell2.37e-119
mature T cell2.37e-119
immature alpha-beta T cell2.37e-119
lymphoid lineage restricted progenitor cell3.04e-1112
leukocyte7.68e-1017
nongranular leukocyte7.68e-1017
hematopoietic lineage restricted progenitor cell4.88e-0825
hematopoietic cell2.49e-0732
hematopoietic oligopotent progenitor cell2.49e-0732
hematopoietic stem cell2.49e-0732
hematopoietic multipotent progenitor cell2.49e-0732
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