FFCP PHASE1:Mm9::chr6:91066779..91066826,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:91066779..91066826,-
|short_description=p1@Nup210
|description=CAGE_peak_1_at_Nup210_5end
|association_with_transcript=0bp_to_ENSMUST00000032179,ENSMUST000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54563 | |EntrezGene=54563 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9QY81,Q8BPS7 | |UniProt=Q9QY81,Q8BPS7 | ||
|association_with_transcript=0bp_to_ENSMUST00000032179,ENSMUST00000068922,ENSMUST00000113509,NM_018815,uc009cxu.2_5end | |||
|cluster_id=chr6:91066779..91066826,- | |||
|description=CAGE_peak_1_at_Nup210_5end | |||
|id=chr6:91066779..91066826,- | |||
|ontology_enrichment_celltype=CL:0000988!1.73e-10!32;CL:0002032!1.73e-10!32;CL:0000037!1.73e-10!32;CL:0000566!1.73e-10!32;CL:0000837!1.73e-10!32;CL:0002031!5.22e-08!25;CL:0000838!1.90e-07!12;CL:0000084!4.51e-07!11;CL:0000827!4.51e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.79e-10,32;CL:0002032,1.79e-10,32;CL:0000037,1.79e-10,32;CL:0000837,1.79e-10,32;CL:0002031,5.41e-08,25;CL:0000838,1.89e-07,12;CL:0000084,4.50e-07,11;CL:0000827,4.50e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.59e-10!29;UBERON:0001041!5.38e-09!92;UBERON:0005057!1.43e-08!51;UBERON:0002390!1.68e-08!45;UBERON:0003061!1.68e-08!45;UBERON:0002193!3.20e-08!48;UBERON:0002405!3.34e-08!70;UBERON:0000077!3.27e-07!97;UBERON:0003408!3.63e-07!24;UBERON:0002370!5.25e-07!23;UBERON:0000974!5.25e-07!23;UBERON:0004807!5.25e-07!23;UBERON:0005058!5.25e-07!23;UBERON:0003351!5.25e-07!23;UBERON:0009113!5.25e-07!23;UBERON:0003295!5.25e-07!23;UBERON:0009722!5.25e-07!23;UBERON:0005562!5.25e-07!23;UBERON:0007690!5.25e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.01e-10,29;UBERON:0005057,8.01e-10,29;UBERON:0002390,1.50e-08,45;UBERON:0003061,1.50e-08,45;UBERON:0002193,2.88e-08,48;UBERON:0002405,2.88e-08,48;UBERON:0003408,3.08e-07,24;UBERON:0002370,4.45e-07,23;UBERON:0000974,4.45e-07,23;UBERON:0004807,4.45e-07,23;UBERON:0005058,4.45e-07,23;UBERON:0003351,4.45e-07,23;UBERON:0009113,4.45e-07,23;UBERON:0003295,4.45e-07,23;UBERON:0009722,4.45e-07,23;UBERON:0005562,4.45e-07,23;UBERON:0007690,4.45e-07,23 | |||
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|phase1_expression=9.76907967339243,0.348975407639361,0.454999239389536,1.20985684522732,0.500895729946347,6.5472916045637,4.90586545250604,68.564484747477,29.987997818305,29.7261948428932,39.5513506600917,48.5812448281599,77.2115291989738,92.0536837472043,59.6266473650036,52.8460447887446,88.1447966441465,60.0955425007443,54.7086590086898,56.01943403734,8.50432901510698,40.4114171387603,26.6423784921714,5.91971964335605,8.94696196161963,1.72269589234506,2.15380998079537,3.66301095566011,5.13063232532209,10.0812051903972,6.43018480900384,52.7075458971494,70.117385784641,47.5445043046316,18.4865036640816,22.1092078326795,23.6836453264348,17.1597968602132,17.9707129240474,19.3703785270305,14.1175557127443,12.294818729252,9.71020706062307,0,0,0,0,7.63088047331563,0,0,1.53985063787899,1.43752564364972,35.0665646660669,74.7123006271685,70.243604020775,0,0.573066879877513,0,12.3413041124355,12.6957835025288,24.0855933332348,0.677689064138264,1.77858959222228,0.449949858640699,0,1.4209602298922,2.09720077362883,4.61061966385865,15.6571314585801,13.095576018174,14.302097371894,10.8547374073445,9.93908434282261,13.8414603112898,13.7059023556078,16.5459381589804,4.40463523997555,7.53355294702608,5.9906547969935,14.7712642257817,9.69769022185542,11.9810075228055,8.09630697104005,12.9435400307286,6.26472815884921,10.3120004915784,12.386336229522,13.7935589910722,1.13589289999776,0.453429360640713,4.34796733052517,2.58127163094416,4.75979933595425,7.55584468292944,11.695975514058,11.6486990645307,16.0106638950197,0,0,0,8.16891834704747,0,0,0,1.29894624606728,2.28023878927589,0.505524445014783,11.1900202124679,40.653247732606,3.41416919849097,10.0621489524359,3.65358573974569,7.37969591219387,3.46662073271032,4.23319345688537,3.01599819191221,0.741584903203122,2.89198713839823,62.8073491884411,16.1766849947409,47.4809264689846,37.8202697445473,7.45567044872489,16.1029438356351,16.3368431314495,10.7291963187608,75.3637133142238,38.3937747835781,60.7395685409249,11.2342979553617,5.94750783664214,20.356005042284,9.90798625095976,13.0414883238469,6.85700547046548,7.62533936418461,6.82323737797119,32.5946262998444,12.8888606801174,32.8289295182899,10.539755879979,13.104419952708,13.6847218652065,9.94651797715719,17.2812707844373,11.1458936647819,14.3363638576385,7.24369438069244,3.23351989399263,5.10586416453112,5.98233822157426,4.82230611340665,6.95118123063995,10.0993128291428,6.37924622864625,5.57295947091781,51.2615626738661,45.2932316521899,72.7458558452717,6.21377317606506,6.80125573945179,6.30217215113552,7.57583153872673,4.9191057936851,3.85667782218446,4.41814495025775,4.29237442239391,4.32031766758527,4.11399624783701,5.58169377868924,3.89130285820108,1.75439984910399,1.97595103761946,1.74468344388483,5.25724871410318,9.98174740079059,7.26921322564356,13.4869788998408,5.75878276445132,9.0572302025571,18.1703120464152,12.9077455758939,11.1189021922435,8.3699275489526,11.3886974770683,8.39964669092456,9.0480675168097,9.74886713001639,9.55324026883689,4.49409704327111,9.07779809473716,9.55878111620963,12.1387456609972,12.3388393618507,14.6520056375005,11.4044743593376,11.2492442557223,12.554311760367,10.3707920883782,11.6612016903886,8.47793130343424,11.5993334086492,8.59712618552732,49.2193061862477,56.2158726023761,60.7127703439105,68.566721029314,54.7472152637986,36.411496804743,31.93427125704,22.86106697528,25.5342114264916,4.31304619582064,13.7692150637346,9.04909252032226,6.56705082662491,7.71408878144222,3.85954817090694,16.2582807346612,5.11626811780309,14.9927778326664,14.2585872051158,14.5507953938871,17.253144516507,13.5684875305028,6.63454402716516,16.3940549870439,18.1601045511995,25.3533082165404,18.1888279334469,18.131923095919,13.1630643309176,0,0.54390568381871,8.35999264132362,8.00216564283724,6.58257418949947,5.15731421005694,0,19.6927323219411,5.36363973007636,10.5418460960092,6.89354872744957,7.88597033243422,6.01556420022464,9.34152551603147,11.334699646897,6.42962887404886,4.74345333535828,9.63963949265421,3.83238230062325,4.80777129901589,7.16702621155735,7.09371528781903,38.4960901185892,14.5668381692989,20.5580018736031,15.4656165399836,22.7382457518195,21.8278955040189,14.7304127105886,24.7202936044704,23.5288269733916,26.8631244245444,27.4088382294997,23.721174947083,14.2984634416591,9.90336017172206,11.1248468053169,10.2881776815164,15.0739198595933,9.81028496811388,9.54384319492302,12.178597964584,5.16277757740163,5.93129798418696,3.96951116498931,6.5954501176592,9.04200789497071,11.0372652618525,11.5791173683042,14.9368218768006,10.7847909553045,6.86073617438886,69.7153193655239,13.8279201535359,22.4085378117351,72.1451190327967,79.1459578504736,71.6075682136416,46.5740898183164,45.6241734575125,49.3373906481793,1.90934123603023,8.38290382990009,14.2323626988794,7.45236851670429,6.48173717644853,4.14888871117737,4.85511646985355,8.76126630688561,4.97336289769656,8.03612834409116,14.9121435140862,1.69107881605257,3.88743019714345,4.13646226142744,4.4723773319131,1.93739735216597,2.19642963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| ||
|short_description=p1@Nup210 | |||
}} | }} |
Latest revision as of 22:09, 1 October 2015
Short description: | p1@Nup210 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nup210_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000032179, ENSMUST00000068922, ENSMUST00000113509, NM_018815, uc009cxu.2_5end |
EntrezGene: | Nup210 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.79e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.79e-10 | 32 |
hematopoietic stem cell | 1.79e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.79e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 5.41e-08 | 25 |
lymphoid lineage restricted progenitor cell | 1.89e-07 | 12 |
T cell | 4.50e-07 | 11 |
pro-T cell | 4.50e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.01e-10 | 29 |
immune organ | 8.01e-10 | 29 |
hematopoietic system | 1.50e-08 | 45 |
blood island | 1.50e-08 | 45 |
hemolymphoid system | 2.88e-08 | 48 |
immune system | 2.88e-08 | 48 |
gland of gut | 3.08e-07 | 24 |
thymus | 4.45e-07 | 23 |
neck | 4.45e-07 | 23 |
respiratory system epithelium | 4.45e-07 | 23 |
hemolymphoid system gland | 4.45e-07 | 23 |
pharyngeal epithelium | 4.45e-07 | 23 |
thymic region | 4.45e-07 | 23 |
pharyngeal gland | 4.45e-07 | 23 |
entire pharyngeal arch endoderm | 4.45e-07 | 23 |
thymus primordium | 4.45e-07 | 23 |
early pharyngeal endoderm | 4.45e-07 | 23 |