FFCP PHASE1:Mm9::chr8:72806954..72806979,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:72806954..72806979,+
|short_description=p2@Homer3
|description=CAGE_peak_2_at_Homer3_5end
|association_with_transcript=21bp_to_ENSMUST00000155711_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26558 | |EntrezGene=26558 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENSMUST00000155711_5end | |||
|cluster_id=chr8:72806954..72806979,+ | |||
|description=CAGE_peak_2_at_Homer3_5end | |||
|id=chr8:72806954..72806979,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.08e-16!50;CL:0000221!2.04e-14!44;CL:0000133!2.04e-14!44;CL:0002319!2.16e-14!43;CL:0000393!1.34e-12!39;CL:0000211!1.34e-12!39;CL:0000540!3.28e-10!33;CL:0000047!3.28e-10!33;CL:0000031!3.28e-10!33;CL:0000404!3.28e-10!33;CL:0002321!2.21e-08!70;CL:0000220!2.21e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.90e-15,44;CL:0000133,3.90e-15,44;CL:0002319,4.18e-15,43;CL:0000393,3.67e-13,39;CL:0000211,3.67e-13,39;CL:0000540,1.41e-10,33;CL:0000047,1.41e-10,33;CL:0000031,1.41e-10,33;CL:0000404,1.41e-10,33;CL:0002321,1.86e-10,70;CL:0000107,3.99e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.13e-11!75;UBERON:0001016!2.13e-11!75;UBERON:0001017!6.01e-11!73;UBERON:0005743!6.01e-11!73;UBERON:0004121!7.78e-09!102;UBERON:0000924!7.78e-09!102;UBERON:0006601!7.78e-09!102;UBERON:0000010!7.54e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.05e-11,75;UBERON:0001017,3.21e-11,73;UBERON:0004121,2.34e-09,95;UBERON:0000924,2.34e-09,95;UBERON:0006601,2.34e-09,95;UBERON:0000010,2.47e-07,11;UBERON:0002410,3.99e-07,9;UBERON:0002346,5.82e-07,64;UBERON:0003075,5.82e-07,64;UBERON:0007284,5.82e-07,64;UBERON:0005178,5.92e-07,17;UBERON:0005181,5.92e-07,17;UBERON:0002224,5.92e-07,17;UBERON:0000915,5.92e-07,17;UBERON:0008947,5.92e-07,17;UBERON:0003258,5.92e-07,17 | |||
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| ||
|short_description=p2@Homer3 | |||
}} | }} |
Latest revision as of 17:23, 25 September 2015
Short description: | p2@Homer3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Homer3_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 21bp_to_ENSMUST00000155711_5end |
EntrezGene: | Homer3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.90e-15 | 44 |
neurectodermal cell | 3.90e-15 | 44 |
neural cell | 4.18e-15 | 43 |
electrically responsive cell | 3.67e-13 | 39 |
electrically active cell | 3.67e-13 | 39 |
neuron | 1.41e-10 | 33 |
neuronal stem cell | 1.41e-10 | 33 |
neuroblast | 1.41e-10 | 33 |
electrically signaling cell | 1.41e-10 | 33 |
embryonic cell | 1.86e-10 | 70 |
autonomic neuron | 3.99e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.05e-11 | 75 |
central nervous system | 3.21e-11 | 73 |
ectoderm-derived structure | 2.34e-09 | 95 |
ectoderm | 2.34e-09 | 95 |
presumptive ectoderm | 2.34e-09 | 95 |
peripheral nervous system | 2.47e-07 | 11 |
autonomic nervous system | 3.99e-07 | 9 |
neurectoderm | 5.82e-07 | 64 |
neural plate | 5.82e-07 | 64 |
presumptive neural plate | 5.82e-07 | 64 |
thoracic cavity element | 5.92e-07 | 17 |
thoracic segment organ | 5.92e-07 | 17 |
thoracic cavity | 5.92e-07 | 17 |
thoracic segment of trunk | 5.92e-07 | 17 |
respiratory primordium | 5.92e-07 | 17 |
endoderm of foregut | 5.92e-07 | 17 |