FFCP PHASE1:Mm9::chrX:56821279..56821307,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:56821279..56821307,-
|short_description=p6@Fgf13
|description=CAGE_peak_6_at_Fgf13_5end
|association_with_transcript=-31bp_to_ENSMUST00000119833,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14168 | |EntrezGene=14168 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=B1AU20,B1AU23 | |UniProt=B1AU20,B1AU23 | ||
|association_with_transcript=-31bp_to_ENSMUST00000119833,ENSMUST00000131319_5end | |||
|cluster_id=chrX:56821279..56821307,- | |||
|description=CAGE_peak_6_at_Fgf13_5end | |||
|id=chrX:56821279..56821307,- | |||
|ontology_enrichment_celltype=CL:0000540!5.62e-17!33;CL:0000047!5.62e-17!33;CL:0000031!5.62e-17!33;CL:0000404!5.62e-17!33;CL:0000117!7.58e-13!23;CL:0000337!7.58e-13!23;CL:0002319!7.59e-12!43;CL:0000221!9.75e-12!44;CL:0000133!9.75e-12!44;CL:0000393!1.68e-11!39;CL:0000211!1.68e-11!39;CL:0000055!9.49e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.35e-21,33;CL:0000047,5.35e-21,33;CL:0000031,5.35e-21,33;CL:0000404,5.35e-21,33;CL:0000393,3.06e-16,39;CL:0000211,3.06e-16,39;CL:0000117,1.28e-14,23;CL:0000337,1.28e-14,23;CL:0002319,7.70e-14,43;CL:0000221,2.60e-13,44;CL:0000133,2.60e-13,44;CL:0000107,1.65e-08,9;CL:0002609,5.40e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.46e-16!73;UBERON:0005743!3.46e-16!73;UBERON:0000073!7.35e-16!75;UBERON:0001016!7.35e-16!75;UBERON:0004121!8.68e-13!102;UBERON:0000924!8.68e-13!102;UBERON:0006601!8.68e-13!102;UBERON:0002346!5.56e-12!71;UBERON:0003075!5.56e-12!71;UBERON:0007284!5.56e-12!71;UBERON:0001049!1.66e-10!52;UBERON:0005068!1.66e-10!52;UBERON:0006241!1.66e-10!52;UBERON:0007135!1.66e-10!52;UBERON:0000033!9.69e-10!63;UBERON:0003056!3.31e-09!49;UBERON:0000955!7.35e-09!50;UBERON:0006238!7.35e-09!50;UBERON:0002020!1.78e-08!34;UBERON:0002616!1.95e-08!49;UBERON:0007811!2.29e-08!86;UBERON:0000153!3.71e-08!94;UBERON:0003080!8.74e-08!40;UBERON:0002780!2.01e-07!39;UBERON:0001890!2.01e-07!39;UBERON:0006240!2.01e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-14,73;UBERON:0001016,7.20e-14,75;UBERON:0004121,1.03e-11,95;UBERON:0000924,1.03e-11,95;UBERON:0006601,1.03e-11,95;UBERON:0002346,4.18e-11,64;UBERON:0003075,4.18e-11,64;UBERON:0007284,4.18e-11,64;UBERON:0010314,1.20e-08,92;UBERON:0002410,1.65e-08,9;UBERON:0010371,1.78e-08,73;UBERON:0000073,2.59e-08,54;UBERON:0002020,2.62e-08,34;UBERON:0001049,2.74e-08,52;UBERON:0005068,2.74e-08,52;UBERON:0006241,2.74e-08,52;UBERON:0007135,2.74e-08,52;UBERON:0003056,2.39e-07,49;UBERON:0001948,8.45e-07,5;UBERON:0002315,8.45e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,1.12630977721333,1.63845168425395,0.68487187290202,0.398860794976682,4.28001824828014,2.36035086531293,0,0.202475267389826,0,0.788655413395594,1.23402990245165,0.42438965179803,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,2.17608642603403,3.02484419228218,0,0,0,11.3297218081375,12.1667925232568,7.60597684207415,0,0,0,0,0,0.299600110518405,0,6.84351441235953,6.61529097825284,5.67877395648731,4.85606673486466,3.75476519617743,8.57435594504678,8.91362880469598,7.35375029288017,1.10115880999389,0.638436690425939,0.921639199537461,14.5074916503213,13.2657083223494,18.2319679694866,0.558365998002762,0.56276261003168,0.61119299110724,6.48182888042069,7.40332740155335,14.1663578827228,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.878342391034642,1.8850203613211,0,0.838705871541442,0,0.127070227073065,1.79748767285787,0.457500602818626,7.03664371832041,0.695297280769106,0.511430914660661,1.24672826735736,1.29793010454206,0.203678727700633,0.124406970610093,0,0,0.520481771850815,0.919608417733892,1.80062129805349,1.35634336052144,1.29269348387523,1.66547836370305,2.06143794031403,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0,0,1.24275463521301,0.938104239924385,0.540186184383045,2.13070262026689,1.96764231747404,0.617068451549513,1.62773761325285,1.87791380979733,1.75148013550754,1.48103864922132,0.656669856316381,0.486412857275134,0.877199924551994,0.658650345873152,0.536825675041487,0.841159794256509,7.61494131606705,0,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0,0.570676878337677,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,1.89304931649754,2.34263246577983,3.23135096599198,1.67278158566786,1.78238939265915,1.69845918473299,2.42886421004937,6.72188473196017,3.95287777946523,2.24924921495265,0.141940085208269,0.178065603667255,0.651547837414304,0,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.776152102696527,1.28602221018955,1.06404140185364,1.96205699362278,1.64549020602121,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.370850604021019,0,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0.279902904647316,0.276399947608848,0,0.949007980743406,0.813277868507395,0.648032044930808,0,0.87345025498471,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0.360586348559907,0.147689527174577,0.403865799792591,0.15241361331,0.201652370273681,0.487289403698762,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0.859265911718438,0,0,0.675022500231806,0,0,1.03552062350364,1.14166082342594,0.798049746802062,2.04880326904961,1.21553358534147,2.93458427679175,2.94149613520023,1.55572709461131,1.23621034343337,0.962757628775446,2.27427490587418,1.52087579934144,1.88626341386076,1.40462261204824,1.53660365771686,1.66562859971278,2.38146845641537,1.73826488917283,0.964546102318525,2.47251540481984,1.47198920134397,1.02860775715625,1.95223386775271,3.09967046931517,2.32554266611726,2.07040636913727,2.03075058940024,2.74391959309159,1.31534855718921,2.44447404922551,2.80571135828869,1.42362021749009,1.47756723563345,2.45538625901814,1.23949472948773,1.54325288784913,4.24677982494508,1.87145286756327,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,1.12630977721333,1.63845168425395,0.68487187290202,0.398860794976682,4.28001824828014,2.36035086531293,0,0.202475267389826,0,0.788655413395594,1.23402990245165,0.42438965179803,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,2.17608642603403,3.02484419228218,0,0,0,11.3297218081375,12.1667925232568,7.60597684207415,0,0,0,0,0,0.299600110518405,0,6.84351441235953,6.61529097825284,5.67877395648731,4.85606673486466,3.75476519617743,8.57435594504678,8.91362880469598,7.35375029288017,1.10115880999389,0.638436690425939,0.921639199537461,14.5074916503213,13.2657083223494,18.2319679694866,0.558365998002762,0.56276261003168,0.61119299110724,6.48182888042069,7.40332740155335,14.1663578827228,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0.173485326766136,0.608930956624282,0.230615497256059,0.452167921657868,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.969750506270444,0,0.878342391034642,1.8850203613211,0,0.838705871541442,0,0.127070227073065,1.79748767285787,0.457500602818626,7.03664371832041,0.695297280769106,0.511430914660661,1.24672826735736,1.29793010454206,0.203678727700633,0.124406970610093,0,0,0.520481771850815,0.919608417733892,1.80062129805349,1.35634336052144,1.29269348387523,1.66547836370305,2.06143794031403,0.517406741478031,0.215567992932842,0.378212160335639,0.175951124163949,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0,0,1.24275463521301,0.938104239924385,0.540186184383045,2.13070262026689,1.96764231747404,0.617068451549513,1.62773761325285,1.87791380979733,1.75148013550754,1.48103864922132,0.656669856316381,0.486412857275134,0.877199924551994,0.658650345873152,0.536825675041487,0.841159794256509,7.61494131606705,0,0,0.213288250535234,0.464473343720877,0.644337306610467,0.403367049246685,0,0.570676878337677,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.58489226135736,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,1.89304931649754,2.34263246577983,3.23135096599198,1.67278158566786,1.78238939265915,1.69845918473299,2.42886421004937,6.72188473196017,3.95287777946523,2.24924921495265,0.141940085208269,0.178065603667255,0.651547837414304,0,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.776152102696527,1.28602221018955,1.06404140185364,1.96205699362278,1.64549020602121,0.608929898229199,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.370850604021019,0,0.619160603889667,0.185194527369712,0.188368457004691,0.27338845544205,0.686334519619568,0.339956859987711,0.279902904647316,0.276399947608848,0,0.949007980743406,0.813277868507395,0.648032044930808,0,0.87345025498471,0.134864346384821,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0.360586348559907,0.147689527174577,0.403865799792591,0.15241361331,0.201652370273681,0.487289403698762,0.192423683280659,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,1.12950368523413,0.920650473014354,1.71868654031819,0.859265911718438,0,0,0.675022500231806,0,0,1.03552062350364,1.14166082342594,0.798049746802062,2.04880326904961,1.21553358534147,2.93458427679175,2.94149613520023,1.55572709461131,1.23621034343337,0.962757628775446,2.27427490587418,1.52087579934144,1.88626341386076,1.40462261204824,1.53660365771686,1.66562859971278,2.38146845641537,1.73826488917283,0.964546102318525,2.47251540481984,1.47198920134397,1.02860775715625,1.95223386775271,3.09967046931517,2.32554266611726,2.07040636913727,2.03075058940024,2.74391959309159,1.31534855718921,2.44447404922551,2.80571135828869,1.42362021749009,1.47756723563345,2.45538625901814,1.23949472948773,1.54325288784913,4.24677982494508,1.87145286756327,0.644613162144895,0.956441660344217,0.220591419119515,0.231867835620421 | ||
|short_description=p6@Fgf13 | |||
}} | }} |
Latest revision as of 22:28, 1 October 2015
Short description: | p6@Fgf13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fgf13_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -31bp_to_ENSMUST00000119833, ENSMUST00000131319_5end |
EntrezGene: | Fgf13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.35e-21 | 33 |
neuronal stem cell | 5.35e-21 | 33 |
neuroblast | 5.35e-21 | 33 |
electrically signaling cell | 5.35e-21 | 33 |
electrically responsive cell | 3.06e-16 | 39 |
electrically active cell | 3.06e-16 | 39 |
CNS neuron (sensu Vertebrata) | 1.28e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-14 | 23 |
neural cell | 7.70e-14 | 43 |
ectodermal cell | 2.60e-13 | 44 |
neurectodermal cell | 2.60e-13 | 44 |
autonomic neuron | 1.65e-08 | 9 |
neuron of cerebral cortex | 5.40e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.32e-14 | 73 |
nervous system | 7.20e-14 | 75 |
ectoderm-derived structure | 1.03e-11 | 95 |
ectoderm | 1.03e-11 | 95 |
presumptive ectoderm | 1.03e-11 | 95 |
neurectoderm | 4.18e-11 | 64 |
neural plate | 4.18e-11 | 64 |
presumptive neural plate | 4.18e-11 | 64 |
structure with developmental contribution from neural crest | 1.20e-08 | 92 |
autonomic nervous system | 1.65e-08 | 9 |
ecto-epithelium | 1.78e-08 | 73 |
regional part of nervous system | 2.59e-08 | 54 |
gray matter | 2.62e-08 | 34 |
neural tube | 2.74e-08 | 52 |
neural rod | 2.74e-08 | 52 |
future spinal cord | 2.74e-08 | 52 |
neural keel | 2.74e-08 | 52 |
pre-chordal neural plate | 2.39e-07 | 49 |
regional part of spinal cord | 8.45e-07 | 5 |
gray matter of spinal cord | 8.45e-07 | 5 |