FFCP PHASE1:Hg19::chr10:105495850..105495876,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105495850..105495876,- to FFCP PHASE1:Hg19::chr10:105495850..105495876,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:105495850..105495876,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr10:105495850..105495876,- | |||
|id=chr10:105495850..105495876,- | |||
|ontology_enrichment_celltype=CL:0002076!3.41e-22!43;CL:0002368!2.47e-17!13;CL:0000223!4.88e-16!59;CL:0002159!1.81e-13!13;CL:0000622!1.62e-12!5;CL:0000244!5.05e-11!4;CL:0000731!5.05e-11!4;CL:0000154!2.38e-10!6;CL:0002202!2.00e-09!9;CL:0002632!2.00e-09!9;CL:0000066!3.86e-09!254;CL:0002328!2.57e-08!3;CL:0002623!3.04e-08!3;CL:0002621!3.97e-08!3;CL:0000068!6.24e-08!3;CL:0000069!6.24e-08!3;CL:0000307!6.24e-08!3;CL:0000377!6.24e-08!3;CL:0000362!1.91e-07!8;CL:0000150!9.75e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.50e-29;13!CL:0002076;3.78e-26;42!CL:0000244;1.94e-15;4!CL:0000731;1.94e-15;4!CL:0000575;1.98e-13;2!CL:0000622;7.04e-12;5!CL:0002202;2.92e-11;9!CL:0002632;2.92e-11;9!CL:0002159;6.85e-11;14!CL:0002251;8.86e-11;20!CL:0000154;5.55e-10;6!CL:0002231;1.31e-09;3!CL:0002621;1.81e-09;3!CL:0002623;1.81e-09;3!CL:0002328;2.99e-09;3!CL:0000307;2.99e-09;3!CL:0002252;2.17e-07;1!CL:0000150;8.38e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.09e-34,42;CL:0002368,1.09e-28,13;CL:0000223,5.04e-24,58;CL:0000244,1.85e-15,4;CL:0000731,1.85e-15,4;CL:0000575,1.98e-13,2;CL:0000622,7.05e-12,5;CL:0002202,3.62e-11,9;CL:0002632,3.62e-11,9;CL:0002159,6.44e-11,14;CL:0002251,7.83e-11,20;CL:0000066,1.48e-10,253;CL:0000154,5.55e-10,6;CL:0002231,1.18e-09,3;CL:0002621,1.81e-09,3;CL:0002623,2.14e-09,3;CL:0002328,2.99e-09,3;CL:0000068,4.18e-09,3;CL:0000069,4.18e-09,3;CL:0000307,4.18e-09,3;CL:0000377,4.18e-09,3;CL:0002252,1.58e-07,1;CL:0002321,1.73e-07,250;CL:0000150,8.38e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;2.68e-15;58!CL:0000377;2.99e-09;3!UBERON:0009143;4.57e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.37e-15!72;UBERON:0004119!7.04e-13!169;UBERON:0000925!7.04e-13!169;UBERON:0006595!7.04e-13!169;UBERON:0000065!1.94e-11!53;UBERON:0000161!1.62e-10!35;UBERON:0007196!4.06e-10!14;UBERON:0001558!4.06e-10!14;UBERON:0000166!5.71e-10!21;UBERON:0000365!8.65e-09!5;UBERON:0003126!1.19e-08!7;UBERON:0001005!1.19e-08!7;UBERON:0000077!1.79e-08!130;UBERON:0004815!2.57e-08!3;UBERON:0002031!2.57e-08!3;UBERON:0001949!3.97e-08!3;UBERON:0001041!7.77e-08!98;UBERON:0005157!9.90e-08!51;UBERON:0003408!1.01e-07!10;UBERON:0005178!1.02e-07!34;UBERON:0002224!1.02e-07!34;UBERON:0003102!1.52e-07!95;UBERON:0005181!2.03e-07!35;UBERON:0005910!2.69e-07!6;UBERON:0001007!2.95e-07!155;UBERON:0001555!2.95e-07!155;UBERON:0007026!2.95e-07!155;UBERON:0004921!4.23e-07!129;UBERON:0004185!4.23e-07!129;UBERON:0000165!6.28e-07!28;UBERON:0000930!6.28e-07!28;UBERON:0001044!8.91e-07!6;UBERON:0003293!8.91e-07!6;UBERON:0003294!8.91e-07!6;UBERON:0010047!8.91e-07!6;UBERON:0000167!8.91e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.17e-13;12!UBERON:0000365;1.87e-12;5!UBERON:0001041;4.09e-11;14!UBERON:0005910;1.85e-10;6!UBERON:0007196;2.96e-10;15!UBERON:0001558;2.96e-10;15!UBERON:0001043;1.81e-09;3!UBERON:0001949;1.81e-09;3!UBERON:0004815;2.99e-09;3!UBERON:0002031;2.99e-09;3!UBERON:0003126;1.27e-08;7!UBERON:0001005;1.27e-08;7!UBERON:0000161;2.83e-08;19!UBERON:0000166;2.83e-08;19!UBERON:0002372;5.40e-08;1!UBERON:0001961;5.40e-08;1!UBERON:0001744;5.40e-08;1!UBERON:0001042;5.40e-08;1!UBERON:0001735;5.40e-08;1!UBERON:0005178;7.35e-08;34!UBERON:0002224;7.35e-08;34!UBERON:0000165;8.78e-08;28!UBERON:0000065;1.27e-07;44!UBERON:0007029;2.17e-07;1!UBERON:0000964;3.83e-07;4!UBERON:0010409;3.83e-07;4!UBERON:0005181;4.24e-07;35!UBERON:0010371;6.05e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.00e-16,160;UBERON:0000925,4.00e-16,160;UBERON:0006595,4.00e-16,160;UBERON:0001004,7.32e-16,74;UBERON:0000365,1.80e-12,5;UBERON:0000065,7.48e-12,54;UBERON:0005910,1.80e-10,6;UBERON:0000161,2.61e-10,36;UBERON:0007196,3.48e-10,15;UBERON:0001558,3.48e-10,15;UBERON:0000166,4.96e-10,22;UBERON:0003102,1.05e-09,99;UBERON:0001043,1.46e-09,3;UBERON:0009143,1.46e-09,3;UBERON:0001949,1.81e-09,3;UBERON:0004815,2.99e-09,3;UBERON:0002031,2.99e-09,3;UBERON:0003126,1.57e-08,7;UBERON:0001005,1.57e-08,7;UBERON:0005178,3.38e-08,34;UBERON:0002224,3.38e-08,34;UBERON:0001041,3.59e-08,87;UBERON:0002372,5.58e-08,1;UBERON:0001961,5.58e-08,1;UBERON:0001744,5.58e-08,1;UBERON:0001735,5.58e-08,1;UBERON:0005181,6.14e-08,35;UBERON:0001007,7.48e-08,145;UBERON:0001555,7.48e-08,145;UBERON:0007026,7.48e-08,145;UBERON:0004921,1.19e-07,118;UBERON:0000165,1.80e-07,29;UBERON:0000930,1.80e-07,29;UBERON:0007029,2.04e-07,1;UBERON:0001444,3.56e-07,49;UBERON:0000964,3.83e-07,4;UBERON:0010409,3.83e-07,4;UBERON:0004348,3.83e-07,4;UBERON:0005427,3.83e-07,4;UBERON:0000153,6.41e-07,62;UBERON:0007811,6.41e-07,62;UBERON:0001003,9.56e-07,15;UBERON:0007376,9.56e-07,15;UBERON:0007383,9.56e-07,15 | |||
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| ||
|short_description=p@chr10:105495850..105495876,- | |||
}} | }} |
Latest revision as of 10:02, 23 July 2015
Short description: | p@chr10:105495850..105495876, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105495850..105495876, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.09e-34 | 42 |
respiratory epithelial cell | 1.09e-28 | 13 |
endodermal cell | 5.04e-24 | 58 |
transitional epithelial cell | 1.85e-15 | 4 |
urothelial cell | 1.85e-15 | 4 |
corneal epithelial cell | 1.98e-13 | 2 |
acinar cell | 7.05e-12 | 5 |
epithelial cell of tracheobronchial tree | 3.62e-11 | 9 |
epithelial cell of lower respiratory tract | 3.62e-11 | 9 |
general ecto-epithelial cell | 6.44e-11 | 14 |
epithelial cell of alimentary canal | 7.83e-11 | 20 |
epithelial cell | 1.48e-10 | 253 |
protein secreting cell | 5.55e-10 | 6 |
epithelial cell of prostate | 1.18e-09 | 3 |
gingival epithelial cell | 1.81e-09 | 3 |
acinar cell of salivary gland | 2.14e-09 | 3 |
bronchial epithelial cell | 2.99e-09 | 3 |
duct epithelial cell | 4.18e-09 | 3 |
branched duct epithelial cell | 4.18e-09 | 3 |
tracheal epithelial cell | 4.18e-09 | 3 |
tracheoblast | 4.18e-09 | 3 |
epithelial cell of esophagus | 1.58e-07 | 1 |
embryonic cell | 1.73e-07 | 250 |
glandular epithelial cell | 8.38e-07 | 9 |