FFCP PHASE1:Hg19::chr10:61666587..61666602,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:61666587..61666602,- to FFCP PHASE1:Hg19::chr10:61666587..61666602,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8030 | |EntrezGene=8030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18782 | |HGNC=18782 | ||
|TSSclassifier=strong | |||
|UniProt=Q05CP8,Q16204 | |UniProt=Q05CP8,Q16204 | ||
|association_with_transcript=-173bp_to_ENST00000263102,NM_005436_5end | |||
|cluster_id=chr10:61666587..61666602,- | |||
|description=CAGE_peak_6_at_CCDC6_5end | |||
|id=chr10:61666587..61666602,- | |||
|ontology_enrichment_celltype=CL:0000066!2.52e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.97e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.20e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.41e-16!143;DOID:305!9.27e-15!106;DOID:162!2.74e-14!235;DOID:14566!1.42e-13!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.05e-12;4!DOID:1612;2.05e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.12e-12,4;DOID:1612,1.12e-12,4;DOID:0050687,9.22e-09,143;DOID:305,1.40e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.01e-07;10!UBERON:0005406;1.10e-07;2!UBERON:0000478;6.53e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.07e-07,2;UBERON:0002331,1.35e-07,10;UBERON:0000358,1.35e-07,10;UBERON:0000307,1.35e-07,10;UBERON:0000091,1.35e-07,10;UBERON:0000087,1.35e-07,10;UBERON:0007010,1.35e-07,10;UBERON:0007806,1.35e-07,10;UBERON:0008780,1.35e-07,10;UBERON:0005728,1.35e-07,10;UBERON:0000478,7.41e-07,24 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.83240725324762,0,0.893922188854576,3.48935409640147,0,0,0,0,0,0.873765488520689,0.791300934685361,0.123766352960047,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0,0,0.382067028739756,0.57470412614962,0.787107813136792,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0.232401601740905,0.426507697462265,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.434473211648397,0,0,0.255725123687061,0,1.00267582127178,0,0,0,0.850813354476611,0.886917589850256,0.702678285545008,0.0654895377488563,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0.953962497221368,0,0.371457501329565,0.39752481473341,0,0.694281003215189,1.13061588384802,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,1.49091585508596,0.25326102332916,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0,0,0,0,0.469737994575059,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0,0.375355559615893,0.554128230968366,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.860413786167011,1.95157929807353,1.98794652482228,1.16193942869518,1.0366105501537,1.51392510525377,2.55484151353081,0,0,0,0,0,0.709840800239063,1.01150814046861,0.964044119533928,0.330881918197182,0.435758888184812,0.949082476444386,1.34831308160164,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.370353780634118,0,0,0,0,0.821860859650752,0.144366447761074,0,0,1.58040879591855,2.57545848628462,0,0,0.148631162288728,0,0.335964256397719,0.567100388969546,0.179117045405697,0,0.383382679165211,5.91195885475132,0.616339038092582,0,0.720599767084807,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0.87192013766656,0.1466765716419,0.258543431515556,0,0,1.32969058292435,0,0,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0,0.737476674166813,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0.561320188866147,0.384417447767103,0,2.2519548960105,4.45254199334973,0,0,0.410635780069046,0,0.232420756919918,0.604297247958111,0,0.0920809889358963,0.229628896329213,0.364182336013434,0,0,0.231046011313244,1.56869953835371,0,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0.0915694648183434,0.082509499920588,0,0.650060246036521,1.6068392984416,0.096670718292122,0.616194468458578,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.356128142586949,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,4.3797869162264,0,0.735120647943095,0.185803175125719,0.432807638929335,0.284567373393656,0.159426272728822,0.59873811429845,0,0.423347165447766,0.649243880549111,0.561594356226918,0.912938716132769,0,0,1.18504244461122,0,0,0,0,0,0,0.500547425135725,0.19538809540204,0,0,1.35227839237992,0,0,0,0,1.57768678274367,0.111443384277478,0,0.95497793895076,1.48482340416319,2.15012491469462,0,0,0.333926115068718,0,0.211125408127993,0.398495976502139,0,0.251932747854276,0.920418142519393,0.123084805461069,0,0.539210106883961,0.716084698702437,0,0,0,0,0,0,0,1.30213880542617,2.97363999987065,0,0.796554137998498,1.27126825146383,0.472775363535873,0.344743373241465,0.874813840149763,0,0,0.844175070377856,0,0,0,0.219385397153973,0.32681539055697,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0.359030577639089,5.64966333994442,0,0.457987967009312,0,0,0,0.166211681900156,0,1.37243774022418,1.1747511088309,0.75901493089674,0.158936578980379,0.421996129056054,0.489698424477443,0.84811842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| |phase1_expression=0.726713517082227,0.642301571672949,1.83240725324762,0,0.893922188854576,3.48935409640147,0,0,0,0,0,0.873765488520689,0.791300934685361,0.123766352960047,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0,0,0.382067028739756,0.57470412614962,0.787107813136792,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0.232401601740905,0.426507697462265,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.434473211648397,0,0,0.255725123687061,0,1.00267582127178,0,0,0,0.850813354476611,0.886917589850256,0.702678285545008,0.0654895377488563,0,0.370784442784429,0.324547393654683,0.174129737299267,0,0.953962497221368,0,0.371457501329565,0.39752481473341,0,0.694281003215189,1.13061588384802,0,0.275118041940067,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,1.49091585508596,0.25326102332916,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0,0,0,0,0.469737994575059,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0,0.375355559615893,0.554128230968366,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.860413786167011,1.95157929807353,1.98794652482228,1.16193942869518,1.0366105501537,1.51392510525377,2.55484151353081,0,0,0,0,0,0.709840800239063,1.01150814046861,0.964044119533928,0.330881918197182,0.435758888184812,0.949082476444386,1.34831308160164,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.370353780634118,0,0,0,0,0.821860859650752,0.144366447761074,0,0,1.58040879591855,2.57545848628462,0,0,0.148631162288728,0,0.335964256397719,0.567100388969546,0.179117045405697,0,0.383382679165211,5.91195885475132,0.616339038092582,0,0.720599767084807,0.25248486685276,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0.87192013766656,0.1466765716419,0.258543431515556,0,0,1.32969058292435,0,0,0,0,0,0,0,0.65147236858747,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,0,0.737476674166813,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0.561320188866147,0.384417447767103,0,2.2519548960105,4.45254199334973,0,0,0.410635780069046,0,0.232420756919918,0.604297247958111,0,0.0920809889358963,0.229628896329213,0.364182336013434,0,0,0.231046011313244,1.56869953835371,0,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0.501689773854853,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0.0915694648183434,0.082509499920588,0,0.650060246036521,1.6068392984416,0.096670718292122,0.616194468458578,0.15350367472613,0,0,0.145016693914229,0.255679882248303,0.356128142586949,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0.430234056612155,0.294747123039363,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,4.3797869162264,0,0.735120647943095,0.185803175125719,0.432807638929335,0.284567373393656,0.159426272728822,0.59873811429845,0,0.423347165447766,0.649243880549111,0.561594356226918,0.912938716132769,0,0,1.18504244461122,0,0,0,0,0,0,0.500547425135725,0.19538809540204,0,0,1.35227839237992,0,0,0,0,1.57768678274367,0.111443384277478,0,0.95497793895076,1.48482340416319,2.15012491469462,0,0,0.333926115068718,0,0.211125408127993,0.398495976502139,0,0.251932747854276,0.920418142519393,0.123084805461069,0,0.539210106883961,0.716084698702437,0,0,0,0,0,0,0,1.30213880542617,2.97363999987065,0,0.796554137998498,1.27126825146383,0.472775363535873,0.344743373241465,0.874813840149763,0,0,0.844175070377856,0,0,0,0.219385397153973,0.32681539055697,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0.359030577639089,5.64966333994442,0,0.457987967009312,0,0,0,0.166211681900156,0,1.37243774022418,1.1747511088309,0.75901493089674,0.158936578980379,0.421996129056054,0.489698424477443,0.84811842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| ||
|short_description=p6@CCDC6 | |||
}} | }} |
Latest revision as of 16:07, 18 September 2015
Short description: | p6@CCDC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CCDC6_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENST00000263102, NM_005436_5end |
EntrezGene: | CCDC6 |
HGNC: | 18782 |
UniProt: | Q05CP8Q16204 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.20e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.07e-07 | 2 |
umbilical cord | 1.35e-07 | 10 |
blastocyst | 1.35e-07 | 10 |
blastula | 1.35e-07 | 10 |
bilaminar disc | 1.35e-07 | 10 |
inner cell mass | 1.35e-07 | 10 |
cleaving embryo | 1.35e-07 | 10 |
connecting stalk | 1.35e-07 | 10 |
inner cell mass derived epiblast | 1.35e-07 | 10 |
extraembryonic mesoderm | 1.35e-07 | 10 |
extraembryonic structure | 7.41e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.12e-12 | 4 |
breast cancer | 1.12e-12 | 4 |
cell type cancer | 9.22e-09 | 143 |
carcinoma | 1.40e-08 | 106 |