FFCP PHASE1:Hg19::chr10:93558160..93558234,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:93558160..93558234,+ to FFCP PHASE1:Hg19::chr10:93558160..93558234,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80351 | |EntrezGene=80351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15677 | |HGNC=15677 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2K2 | |UniProt=Q9H2K2 | ||
|association_with_transcript=9bp_to_NM_025235,uc001khp.2_5end | |||
|cluster_id=chr10:93558160..93558234,+ | |||
|description=CAGE_peak_1_at_TNKS2_5end | |||
|id=chr10:93558160..93558234,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.68e-32!140;CL:0002087!1.92e-26!119;CL:0002031!8.07e-24!124;CL:0000766!1.84e-23!76;CL:0002009!4.34e-23!65;CL:0002057!1.19e-22!42;CL:0002194!7.54e-22!63;CL:0000576!7.54e-22!63;CL:0000040!7.54e-22!63;CL:0000559!7.54e-22!63;CL:0000557!5.67e-21!71;CL:0000037!1.25e-20!172;CL:0000566!1.25e-20!172;CL:0000860!5.61e-20!45;CL:0002032!2.59e-18!165;CL:0000837!2.59e-18!165;CL:0000839!3.44e-18!70;CL:0000988!1.09e-15!182;CL:0000763!4.61e-13!112;CL:0000049!4.61e-13!112;CL:0000791!3.17e-09!18;CL:0000789!3.17e-09!18;CL:0002420!3.17e-09!18;CL:0002419!3.17e-09!18;CL:0000790!3.17e-09!18;CL:0000625!8.82e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.18e-17;33!CL:0002057;4.18e-17;33!CL:0000576;1.13e-14;48!CL:0000473;1.45e-14;39!CL:0000234;1.45e-14;39!CL:0000766;8.86e-11;69!CL:0000791;3.39e-09;18!CL:0000789;3.39e-09;18!CL:0002419;3.39e-09;18!CL:0002087;1.78e-08;104!CL:0000738;1.71e-07;136!CL:0000625;8.56e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.85e-33,136;CL:0002087,5.81e-28,115;CL:0000766,1.80e-25,72;CL:0002009,2.35e-25,61;CL:0002031,3.57e-25,120;CL:0002194,4.51e-24,59;CL:0000576,4.51e-24,59;CL:0000040,4.51e-24,59;CL:0000559,4.51e-24,59;CL:0000557,6.51e-23,67;CL:0000860,1.19e-22,42;CL:0002057,1.19e-22,42;CL:0000473,1.70e-22,48;CL:0000234,1.70e-22,48;CL:0000037,1.44e-21,168;CL:0000839,6.18e-20,66;CL:0002032,3.35e-19,161;CL:0000837,3.35e-19,161;CL:0000988,6.14e-17,177;CL:0000763,5.53e-14,108;CL:0000049,5.53e-14,108;CL:0000791,3.17e-09,18;CL:0000789,3.17e-09,18;CL:0002420,3.17e-09,18;CL:0002419,3.17e-09,18;CL:0000790,3.17e-09,18;CL:0000625,8.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-16;42!CL:0000790;3.39e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.55e-20!102;UBERON:0003061!7.55e-20!102;UBERON:0002193!1.38e-18!112;UBERON:0002371!5.39e-17!80;UBERON:0001474!5.68e-17!86;UBERON:0004765!1.67e-14!101;UBERON:0001434!1.67e-14!101;UBERON:0002405!5.93e-12!115;UBERON:0007023!3.95e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.18e-21,98;UBERON:0003061,3.18e-21,98;UBERON:0002193,8.45e-20,108;UBERON:0002371,1.79e-18,76;UBERON:0001474,2.30e-18,82;UBERON:0002405,2.49e-18,93;UBERON:0004765,4.28e-16,90;UBERON:0001434,4.22e-15,100;UBERON:0007023,4.31e-08,114 | |||
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| ||
|short_description=p1@TNKS2 | |||
}} | }} |
Latest revision as of 00:04, 20 September 2015
Short description: | p1@TNKS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNKS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_025235, uc001khp.2_5end |
EntrezGene: | TNKS2 |
HGNC: | 15677 |
UniProt: | Q9H2K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.85e-33 | 136 |
nongranular leukocyte | 5.81e-28 | 115 |
myeloid leukocyte | 1.80e-25 | 72 |
macrophage dendritic cell progenitor | 2.35e-25 | 61 |
hematopoietic lineage restricted progenitor cell | 3.57e-25 | 120 |
monopoietic cell | 4.51e-24 | 59 |
monocyte | 4.51e-24 | 59 |
monoblast | 4.51e-24 | 59 |
promonocyte | 4.51e-24 | 59 |
granulocyte monocyte progenitor cell | 6.51e-23 | 67 |
classical monocyte | 1.19e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-22 | 42 |
defensive cell | 1.70e-22 | 48 |
phagocyte | 1.70e-22 | 48 |
hematopoietic stem cell | 1.44e-21 | 168 |
myeloid lineage restricted progenitor cell | 6.18e-20 | 66 |
hematopoietic oligopotent progenitor cell | 3.35e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.35e-19 | 161 |
hematopoietic cell | 6.14e-17 | 177 |
myeloid cell | 5.53e-14 | 108 |
common myeloid progenitor | 5.53e-14 | 108 |
mature alpha-beta T cell | 3.17e-09 | 18 |
alpha-beta T cell | 3.17e-09 | 18 |
immature T cell | 3.17e-09 | 18 |
mature T cell | 3.17e-09 | 18 |
immature alpha-beta T cell | 3.17e-09 | 18 |
CD8-positive, alpha-beta T cell | 8.82e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.18e-21 | 98 |
blood island | 3.18e-21 | 98 |
hemolymphoid system | 8.45e-20 | 108 |
bone marrow | 1.79e-18 | 76 |
bone element | 2.30e-18 | 82 |
immune system | 2.49e-18 | 93 |
skeletal element | 4.28e-16 | 90 |
skeletal system | 4.22e-15 | 100 |
adult organism | 4.31e-08 | 114 |