FFCP PHASE1:Hg19::chr11:117159500..117159505,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117159500..117159505,- to FFCP PHASE1:Hg19::chr11:117159500..117159505,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23621 | |EntrezGene=23621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=933 | |HGNC=933 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDU6 | |UniProt=Q8NDU6 | ||
|association_with_transcript=11bp_to_AL833810_5end | |||
|cluster_id=chr11:117159500..117159505,- | |||
|description=CAGE_peak_6_at_BACE1_5end | |||
|id=chr11:117159500..117159505,- | |||
|ontology_enrichment_celltype=CL:0000055!9.21e-10!180;CL:0000057!8.82e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.69e-08;3!CL:0000388;2.69e-08;3!CL:0002591;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.50e-08,3;CL:0000388,3.50e-08,3;CL:0002591,9.51e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.18e-09;3!UBERON:0003057;7.18e-09;3!UBERON:0005425;7.77e-07;1!UBERON:0003099;7.77e-07;1!UBERON:0003852;7.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.41e-09!365;UBERON:0005743!4.66e-08!86;UBERON:0003080!4.87e-08!42;UBERON:0000073!5.06e-08!94;UBERON:0001016!5.06e-08!94;UBERON:0001017!1.20e-07!82;UBERON:0001049!1.42e-07!57;UBERON:0005068!1.42e-07!57;UBERON:0006241!1.42e-07!57;UBERON:0007135!1.42e-07!57;UBERON:0002780!1.55e-07!41;UBERON:0001890!1.55e-07!41;UBERON:0006240!1.55e-07!41;UBERON:0000468!3.52e-07!659;UBERON:0000955!4.33e-07!69;UBERON:0006238!4.33e-07!69;UBERON:0003075!5.00e-07!86;UBERON:0007284!5.00e-07!86;UBERON:0002346!6.88e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.18e-09;3!UBERON:0005174;7.18e-09;3!UBERON:0001137;7.18e-09;3!UBERON:0007846;2.69e-08;3!UBERON:0000043;2.69e-08;3!UBERON:0007845;2.69e-08;3!UBERON:0000941;7.77e-07;1!UBERON:0005705;7.77e-07;1!UBERON:0001785;7.77e-07;1!UBERON:0002464;7.77e-07;1!UBERON:0004904;7.77e-07;1!UBERON:0008193;7.77e-07;1!UBERON:0001021;7.77e-07;1!UBERON:0010912;7.77e-07;1!UBERON:0002514;7.77e-07;1!UBERON:0003457;7.77e-07;1!UBERON:0008907;7.77e-07;1!UBERON:0008001;7.77e-07;1!UBERON:0007213;7.77e-07;1!UBERON:0009891;7.77e-07;1!UBERON:0007914;7.77e-07;1!UBERON:0007375;7.77e-07;1!UBERON:0003323;7.77e-07;1!UBERON:0010258;7.77e-07;1!UBERON:0005253;7.77e-07;1!UBERON:0007842;7.77e-07;1!UBERON:0002397;7.77e-07;1!UBERON:0003113;7.77e-07;1!UBERON:0003277;7.77e-07;1!UBERON:0001709;7.77e-07;1!UBERON:0002244;7.77e-07;1!UBERON:0005620;7.77e-07;1!UBERON:0010364;7.77e-07;1!UBERON:0004288;7.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,8.41e-09,3;UBERON:0005174,8.41e-09,3;UBERON:0001137,8.41e-09,3;UBERON:0007846,3.50e-08,3;UBERON:0000043,3.50e-08,3;UBERON:0007845,3.50e-08,3;UBERON:0000941,6.76e-07,1;UBERON:0001785,6.76e-07,1;UBERON:0002464,6.76e-07,1;UBERON:0004904,6.76e-07,1;UBERON:0001021,6.76e-07,1;UBERON:0003902,6.76e-07,1;UBERON:0005425,6.76e-07,1 | |||
|phase1_expression=0.908391896352783,2.99740733447376,0.422863212287913,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.869079113764942,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0.258416759169329,0.71153252537342,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.860509862246441,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0.404132016209064,0.163461903113459,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.919463387397059,0.300476117813194,0.113432183160021,0.538168907066586,0,0.635795703478686,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.504867548488229,0.460249493211497,0.323292113637624,1.06502877754984,0.201504196455281,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0,0.721879481669586,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0.22001485746285,0.129271715757778,0,0.845302752556,0.797814349754612,0,0.514414748524284,1.41849132023278,0,0.428933980974443,0,0,0.325736184293735,0,0.791951872933429,0,0,0.499864955910285,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,1.91381625495949,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,2.49800584316026,0.315404830067869,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,1.12264037773229,0.384417447767103,2.04682899626681,0.482561763430822,0,0.925258162815933,0.532685175939381,0.164254312027618,0.519254429183621,0.464841513839837,0,0.40101294060657,0,0.68888668898764,1.63882051206045,0.917870904715969,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0,0,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0.551346289938122,0.214840489736547,0.435050081742686,0.255679882248303,0.0890320356467374,0,0,0,0.30347334256665,1.39453664789186,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0.511795582622668,0,0.636406495851874,0.78494864019923,0.179872457583315,0,0.353437207037059,0,0,0,0,0.487426979262569,0,0.136499911407986,0.707027159768564,1.13008116620243,0,0,0.438450885253763,1.73632660280006,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0.633322905892992,0.658589785919804,0,0,0,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0.19924798825107,0,0.503865495708552,0.613612095012929,0,0.933118762985422,0,0,0,0,0,0,0.969332746095218,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0.937057782901357,0,0.19566461893209,0,0,2.41981432097328,0.61214552326098,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0.0969890164884194,0,1.12990370390266,0,0,0.189932387867636,0,0,0,0.39961921916426,0,0.114536596165916,0.514784993585894,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.134366944973453,0.720599767084807,0,0,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0.408610218334727,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,1.30634944043764,0,0,0.340776043570843,0.113312091520126,0.146552233678082,0,0,0.52893040697076,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,4.14889300666675,0.1251909307065,0,0.110929051536852,0.372578417648301,0.1383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| ||
|short_description=p6@BACE1 | |||
}} | }} |
Latest revision as of 21:34, 15 September 2015
Short description: | p6@BACE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BACE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_AL833810_5end |
EntrezGene: | BACE1 |
HGNC: | 933 |
UniProt: | Q8NDU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.50e-08 | 3 |
tendon cell | 3.50e-08 | 3 |
smooth muscle cell of the pulmonary artery | 9.51e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 8.41e-09 | 3 |
dorsal region element | 8.41e-09 | 3 |
dorsum | 8.41e-09 | 3 |
dense regular connective tissue | 3.50e-08 | 3 |
tendon | 3.50e-08 | 3 |
regular connective tissue | 3.50e-08 | 3 |
cranial nerve II | 6.76e-07 | 1 |
cranial nerve | 6.76e-07 | 1 |
nerve trunk | 6.76e-07 | 1 |
nerve connecting eye with brain | 6.76e-07 | 1 |
nerve | 6.76e-07 | 1 |
retinal neural layer | 6.76e-07 | 1 |
presumptive neural retina | 6.76e-07 | 1 |