FFCP PHASE1:Hg19::chr11:30605743..30605749,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:30605743..30605749,- to FFCP PHASE1:Hg19::chr11:30605743..30605749,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=744 | |EntrezGene=744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1180 | |HGNC=1180 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQW8 | |UniProt=E9PQW8 | ||
|association_with_transcript=0bp_to_ENST00000526437,uc009yji.2_5end | |||
|cluster_id=chr11:30605743..30605749,- | |||
|description=CAGE_peak_8_at_MPPED2_5end | |||
|id=chr11:30605743..30605749,- | |||
|ontology_enrichment_celltype=CL:0002319!2.29e-13!25;CL:0000047!3.73e-11!8;CL:0002322!5.62e-11!5;CL:0000133!1.22e-09!59;CL:0002605!5.69e-09!3;CL:0000221!2.75e-07!71;CL:0000540!5.98e-07!6;CL:0000031!5.98e-07!6;CL:0000404!5.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.87e-28;25!CL:0002605;2.28e-25;3!CL:0000047;7.01e-17;2!CL:0000095;5.19e-15;17!CL:0000243;7.90e-12;15!CL:0000125;7.90e-12;15!CL:0000128;3.34e-11;7!CL:0000126;3.34e-11;7!CL:0000127;3.34e-11;7!CL:0000817;7.97e-10;1!CL:1001319;2.45e-09;1!CL:1000600;2.45e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.48e-28,25;CL:0002605,2.58e-25,3;CL:0000047,3.17e-16,8;CL:0000095,4.76e-15,17;CL:0000123,4.76e-15,17;CL:0000243,7.29e-12,15;CL:0000125,7.29e-12,15;CL:0000030,7.29e-12,15;CL:0000339,7.29e-12,15;CL:0000133,1.16e-11,59;CL:0000128,3.52e-11,7;CL:0000126,3.52e-11,7;CL:0000127,3.52e-11,7;CL:0002453,3.52e-11,7;CL:0000221,2.48e-09,72;CL:1001319,2.55e-09,1;CL:1000600,2.55e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000339;7.90e-12;15!CL:0000133;9.16e-08;59!UBERON:0006238;5.28e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.03e-09;1!DOID:4549;1.03e-09;1!DOID:5861;1.03e-09;1!DOID:6496;1.03e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.44e-10,1;DOID:4549,9.44e-10,1;DOID:5861,9.44e-10,1;DOID:6496,9.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.66e-32!86;UBERON:0000073!4.63e-30!94;UBERON:0001016!4.63e-30!94;UBERON:0001017!1.70e-28!82;UBERON:0002791!4.79e-22!33;UBERON:0001893!2.94e-21!34;UBERON:0001869!1.23e-20!32;UBERON:0004121!3.39e-20!169;UBERON:0001049!8.73e-20!57;UBERON:0005068!8.73e-20!57;UBERON:0006241!8.73e-20!57;UBERON:0007135!8.73e-20!57;UBERON:0000924!1.93e-19!173;UBERON:0006601!1.93e-19!173;UBERON:0002020!3.71e-19!34;UBERON:0003528!3.71e-19!34;UBERON:0002780!9.77e-19!41;UBERON:0001890!9.77e-19!41;UBERON:0006240!9.77e-19!41;UBERON:0003075!2.01e-18!86;UBERON:0007284!2.01e-18!86;UBERON:0003056!3.05e-18!61;UBERON:0003080!3.62e-18!42;UBERON:0000955!5.28e-18!69;UBERON:0006238!5.28e-18!69;UBERON:0002346!3.12e-17!90;UBERON:0000956!4.77e-17!25;UBERON:0000203!4.77e-17!25;UBERON:0000153!2.38e-16!129;UBERON:0007811!2.38e-16!129;UBERON:0002616!1.58e-15!59;UBERON:0000033!2.18e-15!123;UBERON:0001950!3.35e-13!20;UBERON:0002619!8.24e-12!22;UBERON:0007023!2.76e-09!115;UBERON:0000922!5.01e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.68e-11;25!UBERON:0000203;7.68e-11;25!UBERON:0004645;2.45e-09;1!UBERON:0001256;2.45e-09;1!UBERON:0001259;2.45e-09;1!UBERON:0002791;2.67e-08;32!UBERON:0001869;3.02e-08;32!UBERON:0003528;5.49e-08;34!UBERON:0002020;5.49e-08;34!UBERON:0001016;7.21e-08;83!UBERON:0001893;9.28e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.12e-16,81;UBERON:0001016,1.50e-14,89;UBERON:0000956,8.62e-11,25;UBERON:0000203,8.62e-11,25;UBERON:0004121,3.21e-10,171;UBERON:0000924,3.21e-10,171;UBERON:0006601,3.21e-10,171;UBERON:0011216,2.29e-09,223;UBERON:0004645,2.55e-09,1;UBERON:0001256,2.55e-09,1;UBERON:0001259,2.55e-09,1;UBERON:0002791,2.14e-08,32;UBERON:0001869,2.14e-08,32;UBERON:0000955,5.32e-08,68;UBERON:0006238,5.32e-08,68;UBERON:0003528,6.92e-08,34;UBERON:0002020,6.92e-08,34;UBERON:0001893,6.92e-08,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.018259549587,3.14811177667634,4.89616294419731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85488647960123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,3.90419561572865,1.54657762555539,6.03058555203656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5613060197858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,7.50177076877752,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,3.87593227018023,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0.242998226632099,0,0.394028536495991,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,1.93688088910723,0,0.909894705249887,0,0,7.49335849291011,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,3.27693205088234,0,0.161475645631851,0,0,1.29766695682514,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,7.11067251723685,0,0,0,1.91643641459393,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.235479278551542,0.157115589916002,0,2.73947616152849,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09192236021678,0,0.329821550236287,0,0,0.218559560503957,0,0,0,0,0.297046400327086,1.6906229103336,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,1.0820016907288,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,2.36069478971826,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.018259549587,3.14811177667634,4.89616294419731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85488647960123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,3.90419561572865,1.54657762555539,6.03058555203656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5613060197858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0.91821828489147,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,7.50177076877752,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,3.87593227018023,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0.242998226632099,0,0.394028536495991,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,1.93688088910723,0,0.909894705249887,0,0,7.49335849291011,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895260599125562,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,3.27693205088234,0,0.161475645631851,0,0,1.29766695682514,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,7.11067251723685,0,0,0,1.91643641459393,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.235479278551542,0.157115589916002,0,2.73947616152849,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09192236021678,0,0.329821550236287,0,0,0.218559560503957,0,0,0,0,0.297046400327086,1.6906229103336,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.0679914901909147,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,1.0820016907288,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,2.36069478971826,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p8@MPPED2 | |||
}} | }} |
Latest revision as of 13:57, 17 September 2015
Short description: | p8@MPPED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MPPED2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526437, uc009yji.2_5end |
EntrezGene: | MPPED2 |
HGNC: | 1180 |
UniProt: | E9PQW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.48e-28 | 25 |
astrocyte of the cerebral cortex | 2.58e-25 | 3 |
neuronal stem cell | 3.17e-16 | 8 |
neuron associated cell | 4.76e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.76e-15 | 17 |
glial cell (sensu Vertebrata) | 7.29e-12 | 15 |
glial cell | 7.29e-12 | 15 |
glioblast | 7.29e-12 | 15 |
glioblast (sensu Vertebrata) | 7.29e-12 | 15 |
neurectodermal cell | 1.16e-11 | 59 |
oligodendrocyte | 3.52e-11 | 7 |
macroglial cell | 3.52e-11 | 7 |
astrocyte | 3.52e-11 | 7 |
oligodendrocyte precursor cell | 3.52e-11 | 7 |
ectodermal cell | 2.48e-09 | 72 |
bladder cell | 2.55e-09 | 1 |
lower urinary tract cell | 2.55e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.12e-16 | 81 |
nervous system | 1.50e-14 | 89 |
cerebral cortex | 8.62e-11 | 25 |
pallium | 8.62e-11 | 25 |
ectoderm-derived structure | 3.21e-10 | 171 |
ectoderm | 3.21e-10 | 171 |
presumptive ectoderm | 3.21e-10 | 171 |
organ system subdivision | 2.29e-09 | 223 |
urinary bladder urothelium | 2.55e-09 | 1 |
wall of urinary bladder | 2.55e-09 | 1 |
mucosa of urinary bladder | 2.55e-09 | 1 |
regional part of telencephalon | 2.14e-08 | 32 |
cerebral hemisphere | 2.14e-08 | 32 |
brain | 5.32e-08 | 68 |
future brain | 5.32e-08 | 68 |
brain grey matter | 6.92e-08 | 34 |
gray matter | 6.92e-08 | 34 |
telencephalon | 6.92e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.44e-10 | 1 |
extraosseous chondrosarcoma | 9.44e-10 | 1 |
myxoid chondrosarcoma | 9.44e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 9.44e-10 | 1 |