FFCP PHASE1:Hg19::chr11:33744262..33744283,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:33744262..33744283,- to FFCP PHASE1:Hg19::chr11:33744262..33744283,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=966 | |EntrezGene=966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1689 | |HGNC=1689 | ||
|TSSclassifier=strong | |||
|UniProt=P13987,Q6FHM9 | |UniProt=P13987,Q6FHM9 | ||
|association_with_transcript=0bp_to_ENST00000437761,ENST00000445143,NM_001127223,NM_001127225,NM_001127226,uc001mus.3,uc009yjx.2,uc009yjy.2_5end | |||
|cluster_id=chr11:33744262..33744283,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_5_at_CD59_5end | |||
|id=chr11:33744262..33744283,- | |||
|ontology_enrichment_celltype=CL:0000548!6.01e-13!679;CL:0000004!6.01e-13!679;CL:0000255!6.01e-13!679;CL:0000012!1.83e-12!682;CL:0002371!2.29e-11!591;CL:0002009!3.13e-10!65;CL:0002078!9.38e-10!44;CL:0000115!1.04e-09!35;CL:0002139!1.24e-09!24;CL:0002194!1.57e-09!63;CL:0000576!1.57e-09!63;CL:0000040!1.57e-09!63;CL:0000559!1.57e-09!63;CL:0000055!1.75e-09!180;CL:0000144!1.81e-09!625;CL:0000222!1.83e-09!119;CL:0000057!4.95e-09!75;CL:0000557!5.05e-09!71;CL:0000063!9.19e-09!578;CL:0000839!4.78e-08!70;CL:0000003!3.07e-07!722;CL:0000071!4.53e-07!18;CL:0002546!4.53e-07!18;CL:0000048!4.65e-07!430;CL:0000766!8.90e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.92e-11;36!CL:0002139;2.03e-11;24!CL:0002551;9.68e-09;6!CL:0000473;1.30e-08;39!CL:0000234;1.30e-08;39!CL:0002078;1.19e-07;45!CL:0000349;1.38e-07;19!CL:0000071;1.92e-07;18!CL:0000235;6.34e-07;6!CL:0000860;9.75e-07;33!CL:0002057;9.75e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.90e-13,36;CL:0002139,3.47e-11,24;CL:0002009,8.50e-11,61;CL:0002194,1.97e-10,59;CL:0000576,1.97e-10,59;CL:0000040,1.97e-10,59;CL:0000559,1.97e-10,59;CL:0002078,2.42e-09,45;CL:0000557,3.39e-09,67;CL:0002551,3.40e-09,6;CL:0000839,1.31e-08,66;CL:0000213,1.47e-08,58;CL:0000215,1.47e-08,58;CL:0000473,8.50e-08,48;CL:0000234,8.50e-08,48;CL:0000349,1.22e-07,19;CL:0000766,2.37e-07,72;CL:0000071,2.44e-07,18;CL:0002546,2.44e-07,18;CL:0000235,5.70e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.92e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.84e-14!216;UBERON:0002204!5.36e-14!167;UBERON:0004872!3.56e-13!84;UBERON:0000055!7.06e-13!69;UBERON:0000926!4.65e-12!448;UBERON:0004120!4.65e-12!448;UBERON:0006603!4.65e-12!448;UBERON:0001981!3.41e-11!60;UBERON:0007500!3.41e-11!60;UBERON:0004537!3.41e-11!60;UBERON:0006965!3.41e-11!60;UBERON:0004765!5.11e-11!101;UBERON:0001434!5.11e-11!101;UBERON:0002049!2.08e-10!79;UBERON:0007798!2.08e-10!79;UBERON:0000467!3.53e-09!625;UBERON:0000480!4.82e-09!626;UBERON:0001474!5.92e-09!86;UBERON:0001637!7.80e-09!42;UBERON:0003509!7.80e-09!42;UBERON:0004572!7.80e-09!42;UBERON:0002371!1.71e-08!80;UBERON:0001737!3.52e-08!9;UBERON:0001009!6.03e-08!113;UBERON:0000468!1.82e-07!659;UBERON:0004535!2.66e-07!110;UBERON:0001986!4.53e-07!18;UBERON:0004638!4.53e-07!18;UBERON:0004852!4.53e-07!18;UBERON:0000914!8.34e-07!83;UBERON:0002329!8.34e-07!83;UBERON:0003077!8.34e-07!83;UBERON:0003059!8.34e-07!83;UBERON:0007282!8.34e-07!83;UBERON:0009618!8.34e-07!83;UBERON:0007285!8.34e-07!83;UBERON:0003124!9.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.18e-14;9!UBERON:0001557;1.18e-14;9!UBERON:0001987;3.82e-08;4!UBERON:0004638;1.92e-07;18!UBERON:0001986;1.92e-07;18!UBERON:0004852;1.92e-07;18!UBERON:0000478;8.04e-07;24!UBERON:0000487;8.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.91e-20,203;UBERON:0001737,1.31e-14,9;UBERON:0004872,1.16e-13,83;UBERON:0005631,1.37e-11,14;UBERON:0000158,1.37e-11,14;UBERON:0000055,1.57e-11,68;UBERON:0000926,1.60e-11,315;UBERON:0004120,1.60e-11,315;UBERON:0006603,1.60e-11,315;UBERON:0003124,1.34e-09,7;UBERON:0007500,2.28e-09,59;UBERON:0001981,2.28e-09,59;UBERON:0004537,2.28e-09,59;UBERON:0006965,2.28e-09,59;UBERON:0002049,5.02e-09,78;UBERON:0007798,5.02e-09,78;UBERON:0001557,2.11e-08,19;UBERON:0002405,2.25e-08,93;UBERON:0001474,3.37e-08,82;UBERON:0001987,3.92e-08,4;UBERON:0004340,3.92e-08,4;UBERON:0002371,5.70e-08,76;UBERON:0004535,1.34e-07,109;UBERON:0004765,1.43e-07,90;UBERON:0004638,2.44e-07,18;UBERON:0001986,2.44e-07,18;UBERON:0004852,2.44e-07,18;UBERON:0001434,3.01e-07,100;UBERON:0001009,3.62e-07,112;UBERON:0000478,7.25e-07,24;UBERON:0000487,9.44e-07,22 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0,0.872338524100369,2.53299878168311,3.15859936713415,0,0.491467873003018,0,3.9319446983431,2.63766978228454,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0.246242116153576,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,0,0,0.447830948479849,1.29557466407592,0.257575567634187,0,1.13362783106643,0.242584061187816,0.232429036905685,0.822335776043652,0.619412741790207,1.1507695692886,6.66017836975662,7.56743135643473,0,1.29096936716765,1.35426486594342,0.188242339542605,0.818718450173537,0.674170453335254,0.306083892370903,1.28371610830437,0.639337125799041,0.329851300186716,4.78712778291916,3.40979800426155,0.290209238628584,1.70215567407342,1.24564449799115,1.25624332628372,5.73631210262222,6.5156653411535,0,0.368277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0.0654895377488563,0,0,3.57002133020152,2.78607579678828,2.92507513141503,0,0,0,1.19257444420023,2.58070378531837,1.04142150482278,0.56530794192401,0.419499436209906,1.6507082516404,1.25396979922086,3.10100111003195,1.06729878806013,1.33888245105868,1.20848795132744,3.80136052859256,1.46437234528902,0.735326160691737,0,1.25019619597712,0.673588117878509,0.563057402416611,1.53316637465883,0,2.01521918323448,0,0,0,0.993943903390637,0.633152558322899,0,1.14734648299525,0.709336764396714,1.12135520028461,1.06748995729705,2.22000793575444,0,1.0776853765575,1.30769522490767,0.151357427644931,0,0,3.74592092196385,1.71141546463335,2.09228152772521,1.76151747965647,2.10434827678571,1.82586048712923,1.63323337003915,0.368502951935304,0.619954687054593,0,0,0,0.718618141816238,0.336672227908132,0.875829639103749,1.10825646193673,0,1.83892677479412,0.45071417671979,1.92834711372036,0.89694817844431,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.930584281657949,0.843881661206331,0.584622030967192,0.504867548488229,0.184099797284599,0,1.06502877754984,1.0075209822764,1.86516651541536,0.773043412653187,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,3.66751080123516,5.05754070234305,4.09718750801919,3.86028904563379,3.05031221729369,2.37270619111097,2.83145747136345,3.13954344200554,4.23221872641029,1.4763109092493,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0.117408694235822,1.29929802984966,1.38895653772983,0.190254152234598,0,0,1.47730203652438,4.44608103764552,2.37809859661965,3.74935335947108,0.503946384596579,0.425325291727159,0.268675568108545,1.16253575405585,0.766765358330422,0.492663237895943,0.176096868026452,0,0,0,0.888970520090367,0.763976851116555,0,3.4214489204541,0.616964956219941,0.300343057843917,0,0.224262168690721,0,1.1734125731352,0,0,9.298330278116,0,0,0.771622122786426,0,0.799266537048298,0,0,0,6.18898750158097,0,0,0,0,0,2.43247561282381,0,8.43335757932127,2.39624855491583,0,0,1.88215698667853,0.821905290201534,1.79060963239896,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,5.45629628603267,8.32177197552485,5.14063498660456,0.744323423456331,0.306923946576125,1.12264037773229,0,0,0.804269605718038,0,0.616838775210622,0.355123450626254,0.246381468041427,1.03850885836724,0.929683027679674,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.308061348417659,0,0,0,1.13733384070897,3.40187410553031,1.51141141271498,1.54227252690289,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,10.8193062230108,0.27470839445503,0.82509499920588,1.14853107599234,0,1.6068392984416,0.096670718292122,0.308097234229289,0,0.275673144969061,0.107420244868274,0,0.340906509664404,0.356128142586949,0.165284915360978,0,0,0.10115778085555,0.929691098594572,1.5740617341532,0,0.924100740528266,1.06461206063404,0.869932992075073,1.8532421910392,2.43312307461385,0,0.316379424718726,0.38126038784765,0,0,0.318203247925937,1.56989728039846,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.731140468893853,2.11300293513511,0.136499911407986,0,1.13008116620243,0.551365343546124,1.99031692572366,3.06915619677634,0,0,1.01455188481352,1.54911749049875,0.281695602532241,0,0,0,0.709522128141196,0.633322905892992,0.987884678879706,0,0,0.0962221127255121,0,0,9.88509908156181,0.86101074534246,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,7.1623345421307,0,4.91457123358771,0,0,0,1.15362711958732,0,0.19924798825107,0,0,0.306806047506464,0,1.55519793830904,0.808815160325942,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.520855522170466,0.0874599999961957,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.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| 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| ||
|short_description=p5@CD59 | |||
}} | }} |
Latest revision as of 16:52, 17 September 2015
Short description: | p5@CD59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD59_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000437761, ENST00000445143, NM_001127223, NM_001127225, NM_001127226, uc001mus.3, uc009yjx.2, uc009yjy.2_5end |
EntrezGene: | CD59 |
HGNC: | 1689 |
UniProt: | P13987Q6FHM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.90e-13 | 36 |
endothelial cell of vascular tree | 3.47e-11 | 24 |
macrophage dendritic cell progenitor | 8.50e-11 | 61 |
monopoietic cell | 1.97e-10 | 59 |
monocyte | 1.97e-10 | 59 |
monoblast | 1.97e-10 | 59 |
promonocyte | 1.97e-10 | 59 |
meso-epithelial cell | 2.42e-09 | 45 |
granulocyte monocyte progenitor cell | 3.39e-09 | 67 |
fibroblast of dermis | 3.40e-09 | 6 |
myeloid lineage restricted progenitor cell | 1.31e-08 | 66 |
lining cell | 1.47e-08 | 58 |
barrier cell | 1.47e-08 | 58 |
defensive cell | 8.50e-08 | 48 |
phagocyte | 8.50e-08 | 48 |
extraembryonic cell | 1.22e-07 | 19 |
myeloid leukocyte | 2.37e-07 | 72 |
blood vessel endothelial cell | 2.44e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-07 | 18 |
macrophage | 5.70e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.91e-20 | 203 |
larynx | 1.31e-14 | 9 |
splanchnic layer of lateral plate mesoderm | 1.16e-13 | 83 |
extraembryonic membrane | 1.37e-11 | 14 |
membranous layer | 1.37e-11 | 14 |
vessel | 1.57e-11 | 68 |
mesoderm | 1.60e-11 | 315 |
mesoderm-derived structure | 1.60e-11 | 315 |
presumptive mesoderm | 1.60e-11 | 315 |
chorion | 1.34e-09 | 7 |
epithelial tube open at both ends | 2.28e-09 | 59 |
blood vessel | 2.28e-09 | 59 |
blood vasculature | 2.28e-09 | 59 |
vascular cord | 2.28e-09 | 59 |
vasculature | 5.02e-09 | 78 |
vascular system | 5.02e-09 | 78 |
upper respiratory tract | 2.11e-08 | 19 |
immune system | 2.25e-08 | 93 |
bone element | 3.37e-08 | 82 |
placenta | 3.92e-08 | 4 |
allantois | 3.92e-08 | 4 |
bone marrow | 5.70e-08 | 76 |
cardiovascular system | 1.34e-07 | 109 |
skeletal element | 1.43e-07 | 90 |
blood vessel endothelium | 2.44e-07 | 18 |
endothelium | 2.44e-07 | 18 |
cardiovascular system endothelium | 2.44e-07 | 18 |
skeletal system | 3.01e-07 | 100 |
circulatory system | 3.62e-07 | 112 |
extraembryonic structure | 7.25e-07 | 24 |
simple squamous epithelium | 9.44e-07 | 22 |