FFCP PHASE1:Hg19::chr11:58980342..58980431,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:58980342..58980431,- to FFCP PHASE1:Hg19::chr11:58980342..58980431,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219972 | |EntrezGene=219972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29619 | |HGNC=29619 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M385 | |UniProt=Q2M385 | ||
|association_with_transcript=0bp_to_ENST00000361050_5end | |||
|cluster_id=chr11:58980342..58980431,- | |||
|coexpression_cluster_id=C803 | |||
|description=CAGE_peak_1_at_MPEG1_5end | |||
|id=chr11:58980342..58980431,- | |||
|ontology_enrichment_celltype=CL:0000738!2.34e-54!140;CL:0002087!4.42e-48!119;CL:0000037!2.24e-46!172;CL:0000566!2.24e-46!172;CL:0000766!1.07e-44!76;CL:0002031!4.29e-44!124;CL:0002032!1.04e-42!165;CL:0000837!1.04e-42!165;CL:0002009!9.24e-42!65;CL:0000988!4.55e-41!182;CL:0002194!2.23e-40!63;CL:0000576!2.23e-40!63;CL:0000040!2.23e-40!63;CL:0000559!2.23e-40!63;CL:0000557!3.16e-40!71;CL:0002057!1.12e-37!42;CL:0000839!1.67e-36!70;CL:0000860!1.07e-33!45;CL:0000763!7.38e-33!112;CL:0000049!7.38e-33!112;CL:0000945!1.26e-09!24;CL:0000826!1.26e-09!24;CL:0000542!4.54e-09!53;CL:0000051!4.54e-09!53;CL:0000838!1.26e-08!52;CL:0002393!1.79e-08!9;CL:0002397!1.79e-08!9;CL:0000236!1.93e-08!14;CL:0000094!2.03e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-29;33!CL:0002057;1.26e-29;33!CL:0000473;4.64e-29;39!CL:0000234;4.64e-29;39!CL:0000576;8.20e-28;48!CL:0000766;5.59e-21;69!CL:0002087;4.43e-15;104!CL:0000738;3.94e-12;136!CL:0000763;1.21e-10;100!CL:0000236;4.88e-08;13!CL:0000094;7.94e-08;8!CL:0000945;2.36e-07;24!CL:0000988;3.38e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.76e-54,136;CL:0000766,2.75e-50,72;CL:0002087,6.52e-50,115;CL:0002009,1.19e-49,61;CL:0002194,3.60e-48,59;CL:0000576,3.60e-48,59;CL:0000040,3.60e-48,59;CL:0000559,3.60e-48,59;CL:0000473,1.89e-45,48;CL:0000234,1.89e-45,48;CL:0000557,2.01e-45,67;CL:0002031,3.99e-44,120;CL:0000037,7.06e-44,168;CL:0000839,2.35e-41,66;CL:0000860,3.38e-40,42;CL:0002057,3.38e-40,42;CL:0002032,4.50e-40,161;CL:0000837,4.50e-40,161;CL:0000988,2.15e-39,177;CL:0000763,1.76e-33,108;CL:0000049,1.76e-33,108;CL:0002393,5.92e-09,9;CL:0002397,5.92e-09,9;CL:0000094,7.94e-08,8;CL:0000945,2.41e-07,24;CL:0000826,2.41e-07,24;CL:0000236,3.52e-07,14;CL:0000542,4.95e-07,53;CL:0000051,4.95e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;6.68e-29;42!CL:0000049;6.84e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-43!102;UBERON:0003061!1.29e-43!102;UBERON:0002193!4.62e-39!112;UBERON:0007023!6.46e-37!115;UBERON:0002371!1.31e-34!80;UBERON:0001474!3.58e-30!86;UBERON:0002405!2.11e-27!115;UBERON:0004765!5.49e-23!101;UBERON:0001434!5.49e-23!101;UBERON:0003081!1.00e-12!216;UBERON:0002204!1.24e-08!167;UBERON:0001049!3.02e-08!57;UBERON:0005068!3.02e-08!57;UBERON:0006241!3.02e-08!57;UBERON:0007135!3.02e-08!57;UBERON:0000479!4.96e-08!787;UBERON:0000178!5.46e-07!15;UBERON:0000179!5.46e-07!15;UBERON:0000463!5.46e-07!15;UBERON:0003080!5.61e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.41e-09;114!UBERON:0000178;1.68e-07;15!UBERON:0000179;1.68e-07;15!UBERON:0000463;1.68e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.51e-48,98;UBERON:0003061,5.51e-48,98;UBERON:0002193,3.64e-43,108;UBERON:0002371,3.68e-39,76;UBERON:0002405,3.65e-36,93;UBERON:0007023,1.80e-35,114;UBERON:0001474,2.77e-34,82;UBERON:0004765,7.36e-29,90;UBERON:0001434,3.59e-24,100;UBERON:0003081,3.91e-17,203;UBERON:0000479,4.25e-09,773;UBERON:0002204,4.82e-09,167;UBERON:0000178,1.69e-07,15;UBERON:0000179,1.69e-07,15;UBERON:0000463,1.69e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70627602516243,0,0,0,0,0,0,0,0,0,1.29902789771517,1.14940825229924,0.944529375764151,520.4209382711,269.064408066146,324.804226717127,0,0,0,0.852139206383318,4.97592313705975,20.2584303141045,436.548381923119,493.740429671489,431.851632724545,1038.07213857629,828.196104010531,943.499304244025,931.275719383112,754.996135490241,702.523441199916,1022.45533334811,684.59453355634,773.336808125074,952.261818586318,612.224088604551,776.134678494337,1032.16856812544,655.166953837583,599.939335612934,885.680207547955,639.146203435475,694.170843450866,951.002653596394,962.145223174129,732.041009039902,821.329737464923,599.986682125869,619.730787274537,926.638098941069,695.614285471337,725.587920079845,851.481726555103,594.49052699903,864.194413081659,968.63920421339,969.30673791927,864.891704875937,703.691358705078,567.228272306736,556.43404517923,1058.24803403113,977.651572398206,1532.67919474336,386.477280513133,466.658524709065,445.152542724413,119.677446233699,135.442375593009,115.636203002262,121.618113431455,192.590469764322,132.193061189531,138.158378412036,132.613471880416,118.396297574765,96.306899056834,124.238799140699,5.28685314316103,43.1591593495783,39.2442286314865,2.16380747125216,1.17903228824749,5.34563897398724,0,2.60737813306872,0,0,0,0,0,0.270803863765016,0,0,0,0,0,1.18629250529648,2.40786745280742,1.04535523804977,0,0.766440987203842,0,1.26509846009751,17.8396632021494,2.60433381542567,0.950452044448374,48.3346132239651,34.4283984005385,62.4653632761729,64.8769670600606,14.7803039445788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05401742831751,21.7425265326203,0,0,4.54366351116557,5.74628133087582,22.2039794066505,494.868045433585,673.810004898991,453.921066624728,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,558.748969928908,329.613224526077,0,0,0,0,0,9.22137793715728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.808987848960987,0,0,0,0,0,0,3.80265104465493,22.6050259835854,23.6315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,755.393774676135,110.45001314572,357.60657646668,0,0,0,0,0,0,0,0,1.03664057770386,0.864719720501769,0.6312121671319,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,617.848805657248,702.657670913545,594.551709342149,0,0,0,0,0,0,0,23.8407219844332,2.37190332345469,24.2568338568724,0.254094624222463,0,0,4.35542289869307,0,453.149249488045,239.32916736322,356.811757068427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,383.968224510202,311.707020182901,239.283184595322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4815399934646,0,0,0,0,0,0,0,0,0,0,0,0.852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.717881977197,0,0,0,0,0,0.844430541190656,0,0,0,0,8.04362730642945,0,27.301702225266,0,0,0,0,252.70890939762,212.56914358558,235.833935490103,285.878130549347,335.671614838335,260.686271099472,232.753549449627,240.316928417164,0,0,0,60.3860319158586,1.15415370381156,0,0,0.399158742865633,0.5745161103971,0,0,0,25.1058146936511,0,0,0.169291777801603,52.5123005589097,93.0296650150729,8.94277099149685,0,4.60861146462687,8.72336820780422,4.50492682622153,1.9538809540204,0,0,0,0,0,0,59.6288289636609,0,0,0,1.43246690842614,10.9876931908076,0,0.994147647766298,6.04878490565205,0,0,0,21.7180307193666,83.9903103214689,0,0,14.2778374334841,0,0,0,76.2242831638039,13.1195729497122,256.246908811226,0,8.72399471485697,4.91670920257812,1.99613798001194,0,0,21.024987687609,0,0,0,0,0,0,3.54296554325536,3.49729672013683,0,0.995213339381022,1.18219047581419,4.8264787373874,0,0,11.8503398095847,0,0,0,0,6.38002319463839,0.915975934018623,21.854425816764,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,11.9431431729421,26.7141844800084,25.6632660872123,0,0,0,17.9287013728601,25.6824847135612,7.02793337176017,0.182454789215666,0,0,3.55125962564451,37.5071219750858,4.59109142445735,145.01320024738,0,0,0,0,0,0,0,0,0,0,0,47.0014737571061,0,0,0,0,10.862769846703,0,8.3612874088797,0,0,6.07783641176436,0,0,25.400906373983,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,4.38097212454378,15.3295905680367,0,0,17.594791280152,16.0412296808179,2.87149209830726,12.7794560319354,16.7398158773263,18.7464024251173,10.8837225428497,0,0,0,0,0,0,0,0.795229689809303,4.22230558945884,0,0,0,221.149335395125,77.380195455795,6.62170167572469,0,20.8835124342875,11.1728272727546,0,0,0,40.7376336032819,13.9039313776741,0,0,0,0,0,0,0,0,39.4225508594042,37.101928895422,1.29282956361551,3.9669780522807,0,0,51.5783202701965,21.8513984088536,52.6083600290938,150.834470630833,0,37.6339128996968,0,3.26410682021684,6.2672473505675,9.19036730290385,3.60659893780785,0,0,0.976210119215705,3.004582336956,9.17454713104114,7.4322464529691,12.7297626029836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14775308455192,0,0.132864840313363,0,0,0,0,0,4.6944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| ||
|short_description=p1@MPEG1 | |||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p1@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPEG1_5end |
Coexpression cluster: | C803_Macrophage_CD14_Monocytederived_Eosinophils_Basophils_CD14CD16_Dendritic |
Association with transcript: | 0bp_to_ENST00000361050_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | Q2M385 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.76e-54 | 136 |
myeloid leukocyte | 2.75e-50 | 72 |
nongranular leukocyte | 6.52e-50 | 115 |
macrophage dendritic cell progenitor | 1.19e-49 | 61 |
monopoietic cell | 3.60e-48 | 59 |
monocyte | 3.60e-48 | 59 |
monoblast | 3.60e-48 | 59 |
promonocyte | 3.60e-48 | 59 |
defensive cell | 1.89e-45 | 48 |
phagocyte | 1.89e-45 | 48 |
granulocyte monocyte progenitor cell | 2.01e-45 | 67 |
hematopoietic lineage restricted progenitor cell | 3.99e-44 | 120 |
hematopoietic stem cell | 7.06e-44 | 168 |
myeloid lineage restricted progenitor cell | 2.35e-41 | 66 |
classical monocyte | 3.38e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.38e-40 | 42 |
hematopoietic oligopotent progenitor cell | 4.50e-40 | 161 |
hematopoietic multipotent progenitor cell | 4.50e-40 | 161 |
hematopoietic cell | 2.15e-39 | 177 |
myeloid cell | 1.76e-33 | 108 |
common myeloid progenitor | 1.76e-33 | 108 |
intermediate monocyte | 5.92e-09 | 9 |
CD14-positive, CD16-positive monocyte | 5.92e-09 | 9 |
granulocyte | 7.94e-08 | 8 |
lymphocyte of B lineage | 2.41e-07 | 24 |
pro-B cell | 2.41e-07 | 24 |
B cell | 3.52e-07 | 14 |
lymphocyte | 4.95e-07 | 53 |
common lymphoid progenitor | 4.95e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.51e-48 | 98 |
blood island | 5.51e-48 | 98 |
hemolymphoid system | 3.64e-43 | 108 |
bone marrow | 3.68e-39 | 76 |
immune system | 3.65e-36 | 93 |
adult organism | 1.80e-35 | 114 |
bone element | 2.77e-34 | 82 |
skeletal element | 7.36e-29 | 90 |
skeletal system | 3.59e-24 | 100 |
lateral plate mesoderm | 3.91e-17 | 203 |
tissue | 4.25e-09 | 773 |
musculoskeletal system | 4.82e-09 | 167 |
blood | 1.69e-07 | 15 |
haemolymphatic fluid | 1.69e-07 | 15 |
organism substance | 1.69e-07 | 15 |