FFCP PHASE1:Hg19::chr11:64889651..64889664,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64889651..64889664,- to FFCP PHASE1:Hg19::chr11:64889651..64889664,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2197 | |EntrezGene=2197 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3597 | |HGNC=3597 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001ocx.2_5end | |||
|cluster_id=chr11:64889651..64889664,- | |||
|description=CAGE_peak_2_at_FAU_5end | |||
|id=chr11:64889651..64889664,- | |||
|ontology_enrichment_celltype=CL:0000548!6.31e-41!679;CL:0000004!6.31e-41!679;CL:0000255!6.31e-41!679;CL:0000012!8.01e-41!682;CL:0000066!2.99e-35!254;CL:0002321!1.44e-26!248;CL:0000220!2.43e-26!246;CL:0000144!8.47e-24!625;CL:0000003!3.06e-22!722;CL:0000063!6.01e-20!578;CL:0002371!4.31e-18!591;CL:0000223!2.40e-11!59;CL:0000222!4.38e-11!119;CL:0000076!2.02e-10!62;CL:0002076!4.45e-09!43;CL:0000192!2.07e-07!42;CL:0000514!2.07e-07!42;CL:0000393!3.02e-07!60;CL:0000211!3.02e-07!60;CL:0000183!3.74e-07!59;CL:1000497!4.98e-07!18;CL:0002518!4.98e-07!18;CL:1000449!6.85e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.81e-07;17!CL:0002518;1.81e-07;17!CL:1000449;2.27e-07;15!CL:0002076;4.60e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.99e-35,253;CL:0002321,9.15e-27,250;CL:0000223,1.98e-11,58;CL:0000222,3.27e-11,121;CL:0000076,2.33e-10,63;CL:0002076,3.59e-09,42;CL:1000497,1.79e-07,17;CL:0002518,1.79e-07,17;CL:1000449,2.23e-07,15;CL:0000192,3.38e-07,43;CL:0000514,3.38e-07,43;CL:0000393,4.33e-07,61;CL:0000211,4.33e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000223;6.25e-07;58 | |||
|ontology_enrichment_disease=DOID:14566!1.05e-14!239;DOID:162!1.53e-14!235;DOID:305!9.81e-13!106;DOID:0050687!2.17e-09!143;DOID:0050686!6.58e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.05e-14,239;DOID:162,1.53e-14,235;DOID:305,9.81e-13,106;DOID:0050687,2.17e-09,143;DOID:0050686,6.58e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.91e-15!238;UBERON:0009142!1.91e-15!238;UBERON:0002100!1.68e-12!216;UBERON:0000490!5.35e-12!138;UBERON:0003914!5.82e-12!118;UBERON:0005256!7.04e-12!143;UBERON:0000926!8.61e-10!448;UBERON:0004120!8.61e-10!448;UBERON:0006603!8.61e-10!448;UBERON:0009569!3.16e-09!113;UBERON:0005177!2.38e-07!107;UBERON:0001637!2.69e-07!42;UBERON:0003509!2.69e-07!42;UBERON:0004572!2.69e-07!42;UBERON:0000486!3.06e-07!82;UBERON:0006554!3.95e-07!44;UBERON:0004119!5.69e-07!169;UBERON:0000925!5.69e-07!169;UBERON:0006595!5.69e-07!169;UBERON:0005172!6.36e-07!55;UBERON:0005173!6.36e-07!55;UBERON:0004211!6.85e-07!16;UBERON:0001285!6.85e-07!16;UBERON:0007684!6.85e-07!16;UBERON:0003220!6.85e-07!16;UBERON:0004208!6.85e-07!16;UBERON:0004290!7.26e-07!70;UBERON:0001008!8.41e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.64e-07;24!UBERON:0011143;1.64e-07;24!UBERON:0006555;2.27e-07;15!UBERON:0004819;2.27e-07;15!UBERON:0001285;2.27e-07;15!UBERON:0007684;2.27e-07;15!UBERON:0006554;2.44e-07;30!UBERON:0001008;2.44e-07;30!UBERON:0000072;3.36e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.05e-14,199;UBERON:0000490,2.72e-13,148;UBERON:0003914,4.16e-12,117;UBERON:0003104,3.26e-11,160;UBERON:0009142,3.26e-11,160;UBERON:0005256,1.53e-10,122;UBERON:0009569,3.09e-09,112;UBERON:0005177,3.66e-09,101;UBERON:0007503,5.66e-09,78;UBERON:0006554,4.68e-08,47;UBERON:0001008,1.04e-07,48;UBERON:0004211,2.23e-07,15;UBERON:0009773,2.23e-07,15;UBERON:0001231,2.23e-07,15;UBERON:0001285,2.23e-07,15;UBERON:0007684,2.23e-07,15;UBERON:0004208,2.23e-07,15;UBERON:0001637,2.69e-07,42;UBERON:0003509,2.69e-07,42;UBERON:0004572,2.69e-07,42;UBERON:0000486,4.06e-07,83;UBERON:0005172,4.34e-07,54;UBERON:0005173,4.34e-07,54;UBERON:0004119,5.28e-07,160;UBERON:0000925,5.28e-07,160;UBERON:0006595,5.28e-07,160;UBERON:0007500,5.56e-07,59;UBERON:0001981,5.56e-07,59;UBERON:0004537,5.56e-07,59;UBERON:0006965,5.56e-07,59;UBERON:0002329,9.83e-07,71;UBERON:0003059,9.83e-07,71;UBERON:0007282,9.83e-07,71;UBERON:0004290,9.83e-07,71;UBERON:0009618,9.83e-07,71 | |||
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| ||
|short_description=p2@FAU | |||
}} | }} |
Latest revision as of 06:25, 19 September 2015
Short description: | p2@FAU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAU_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001ocx.2_5end |
EntrezGene: | FAU |
HGNC: | 3597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.99e-35 | 253 |
embryonic cell | 9.15e-27 | 250 |
endodermal cell | 1.98e-11 | 58 |
mesodermal cell | 3.27e-11 | 121 |
squamous epithelial cell | 2.33e-10 | 63 |
endo-epithelial cell | 3.59e-09 | 42 |
kidney cell | 1.79e-07 | 17 |
kidney epithelial cell | 1.79e-07 | 17 |
epithelial cell of nephron | 2.23e-07 | 15 |
smooth muscle cell | 3.38e-07 | 43 |
smooth muscle myoblast | 3.38e-07 | 43 |
electrically responsive cell | 4.33e-07 | 61 |
electrically active cell | 4.33e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.05e-14 | 199 |
unilaminar epithelium | 2.72e-13 | 148 |
epithelial tube | 4.16e-12 | 117 |
mesenchyme | 3.26e-11 | 160 |
entire embryonic mesenchyme | 3.26e-11 | 160 |
trunk mesenchyme | 1.53e-10 | 122 |
subdivision of trunk | 3.09e-09 | 112 |
trunk region element | 3.66e-09 | 101 |
epithelial vesicle | 5.66e-09 | 78 |
urinary system structure | 4.68e-08 | 47 |
renal system | 1.04e-07 | 48 |
nephron epithelium | 2.23e-07 | 15 |
renal tubule | 2.23e-07 | 15 |
nephron tubule | 2.23e-07 | 15 |
nephron | 2.23e-07 | 15 |
uriniferous tubule | 2.23e-07 | 15 |
nephrogenic mesenchyme | 2.23e-07 | 15 |
artery | 2.69e-07 | 42 |
arterial blood vessel | 2.69e-07 | 42 |
arterial system | 2.69e-07 | 42 |
multilaminar epithelium | 4.06e-07 | 83 |
abdomen element | 4.34e-07 | 54 |
abdominal segment element | 4.34e-07 | 54 |
endoderm-derived structure | 5.28e-07 | 160 |
endoderm | 5.28e-07 | 160 |
presumptive endoderm | 5.28e-07 | 160 |
epithelial tube open at both ends | 5.56e-07 | 59 |
blood vessel | 5.56e-07 | 59 |
blood vasculature | 5.56e-07 | 59 |
vascular cord | 5.56e-07 | 59 |
somite | 9.83e-07 | 71 |
presomitic mesoderm | 9.83e-07 | 71 |
presumptive segmental plate | 9.83e-07 | 71 |
dermomyotome | 9.83e-07 | 71 |
trunk paraxial mesoderm | 9.83e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.05e-14 | 239 |
cancer | 1.53e-14 | 235 |
carcinoma | 9.81e-13 | 106 |
cell type cancer | 2.17e-09 | 143 |
organ system cancer | 6.58e-07 | 137 |