FFCP PHASE1:Hg19::chr11:76381695..76381719,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:76381695..76381719,- to FFCP PHASE1:Hg19::chr11:76381695..76381719,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2615 | |EntrezGene=2615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4161 | |HGNC=4161 | ||
|TSSclassifier=strong | |||
|UniProt=Q14392 | |UniProt=Q14392 | ||
|association_with_transcript=71bp_to_ENST00000260061,ENST00000404995,NM_001128922,uc001oxr.3_5end | |||
|cluster_id=chr11:76381695..76381719,- | |||
|description=CAGE_peak_4_at_LRRC32_5end | |||
|id=chr11:76381695..76381719,- | |||
|ontology_enrichment_celltype=CL:0002139!1.46e-14!24;CL:0000115!9.91e-13!35;CL:0000071!3.42e-10!18;CL:0002546!3.42e-10!18;CL:0000222!2.08e-09!119;CL:0002334!3.25e-09!12;CL:0002078!4.40e-09!44;CL:0000183!2.05e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.41e-20;24!CL:0000115;4.91e-17;36!CL:0000071;1.66e-13;18!CL:0002334;7.41e-13;12!CL:0002078;4.90e-10;45!CL:0002138;2.52e-08;6!CL:0002543;1.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.31e-20,36;CL:0002139,4.86e-20,24;CL:0002078,1.77e-15,45;CL:0000071,1.33e-13,18;CL:0002546,1.33e-13,18;CL:0000222,1.56e-13,121;CL:0002334,6.48e-13,12;CL:0000213,9.07e-10,58;CL:0000215,9.07e-10,58;CL:0005020,2.97e-08,6;CL:0002138,2.97e-08,6;CL:0005022,2.97e-08,6;CL:0002543,1.18e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.66e-13;18!CL:0005022;2.52e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.81e-14!84;UBERON:0001009!4.73e-13!113;UBERON:0002049!9.40e-13!79;UBERON:0007798!9.40e-13!79;UBERON:0004535!4.52e-12!110;UBERON:0000055!5.07e-12!69;UBERON:0001986!3.42e-10!18;UBERON:0004638!3.42e-10!18;UBERON:0004852!3.42e-10!18;UBERON:0003914!6.87e-10!118;UBERON:0007023!2.30e-09!115;UBERON:0001981!1.14e-08!60;UBERON:0007500!1.14e-08!60;UBERON:0004537!1.14e-08!60;UBERON:0006965!1.14e-08!60;UBERON:0000477!1.14e-08!286;UBERON:0007100!1.65e-08!27;UBERON:0004111!2.20e-08!241;UBERON:0000025!9.95e-08!194;UBERON:0000490!1.34e-07!138;UBERON:0000948!2.35e-07!24;UBERON:0005498!2.35e-07!24;UBERON:0004140!2.35e-07!24;UBERON:0009881!2.35e-07!24;UBERON:0004141!2.35e-07!24;UBERON:0003084!2.35e-07!24;UBERON:0007005!2.35e-07!24;UBERON:0004139!2.35e-07!24;UBERON:0004291!2.35e-07!24;UBERON:0001013!2.67e-07!14;UBERON:0000119!3.19e-07!312;UBERON:0000468!3.22e-07!659;UBERON:0003103!5.37e-07!69;UBERON:0006914!5.54e-07!25;UBERON:0000487!5.88e-07!22;UBERON:0002465!9.43e-07!10;UBERON:0000483!9.61e-07!309;UBERON:0002385!9.78e-07!63;UBERON:0001015!9.78e-07!63;UBERON:0000383!9.78e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.66e-13;18!UBERON:0001986;1.66e-13;18!UBERON:0004852;1.66e-13;18!UBERON:0000487;4.55e-10;22!UBERON:0006914;1.84e-09;25!UBERON:0007100;2.67e-09;25!UBERON:0001013;2.31e-08;14!UBERON:0000948;1.01e-07;22!UBERON:0001473;1.17e-07;8!UBERON:0004536;1.17e-07;8!UBERON:0006558;1.17e-07;8!UBERON:0001638;1.39e-07;9!UBERON:0003920;1.39e-07;9!UBERON:0004582;1.39e-07;9!UBERON:0000055;2.83e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,2.21e-15,112;UBERON:0004872,2.45e-15,83;UBERON:0004535,4.90e-14,109;UBERON:0002049,7.17e-14,78;UBERON:0007798,7.17e-14,78;UBERON:0003914,8.23e-14,117;UBERON:0004638,1.33e-13,18;UBERON:0001986,1.33e-13,18;UBERON:0004852,1.33e-13,18;UBERON:0000926,4.50e-13,315;UBERON:0004120,4.50e-13,315;UBERON:0006603,4.50e-13,315;UBERON:0000055,5.62e-13,68;UBERON:0000490,1.94e-10,148;UBERON:0000487,3.81e-10,22;UBERON:0003104,4.00e-10,160;UBERON:0009142,4.00e-10,160;UBERON:0005256,1.33e-09,122;UBERON:0006914,1.33e-09,25;UBERON:0007100,1.88e-09,27;UBERON:0003103,2.48e-09,68;UBERON:0007500,5.81e-09,59;UBERON:0001981,5.81e-09,59;UBERON:0004537,5.81e-09,59;UBERON:0006965,5.81e-09,59;UBERON:0001013,3.19e-08,14;UBERON:0007503,3.23e-08,78;UBERON:0002100,3.38e-08,199;UBERON:0000948,7.66e-08,24;UBERON:0005498,7.66e-08,24;UBERON:0004140,7.66e-08,24;UBERON:0009881,7.66e-08,24;UBERON:0004141,7.66e-08,24;UBERON:0003084,7.66e-08,24;UBERON:0007005,7.66e-08,24;UBERON:0004139,7.66e-08,24;UBERON:0004291,7.66e-08,24;UBERON:0001473,1.12e-07,8;UBERON:0004536,1.12e-07,8;UBERON:0006558,1.12e-07,8;UBERON:0001638,2.13e-07,9;UBERON:0003920,2.13e-07,9;UBERON:0004582,2.13e-07,9 | |||
|phase1_expression=5.08699461957559,1.92690471501885,2.96004248601539,0,0.893922188854576,4.36169262050184,0,1.26343974685366,3.13422753839806,0,0,1.96597234917155,1.84636884759917,1.48519623552056,0.994192127183747,0,0,0,0,0.369363174230364,0.408001382488506,0,0,0.136874425072884,0.376627918784408,0.458480434487708,0.410502947249729,1.02324015707783,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,2.21598163412751,1.40381113229099,0.651032612147555,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0.637812899895131,0,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,1.17447437874188,0,1.32171328579026,0.560508562981536,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,1.08321545506006,0.384273959177026,0.910415432919148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,2.42938867502708,0,1.50401373190767,0.289693037921647,0,0,0,0,0.087834785693126,2.03017567021455,0,0,0,0,0,0,0,0,0.596287222100115,0,5.20710752411391,2.26123176769604,3.77549492588915,2.20094433552054,1.67195973229448,4.13466814670926,6.40379272836078,5.02080919147005,3.22263453687318,4.56163263431108,2.92874469057803,2.94130464276695,3.24056779152704,7.85837608899902,6.51135180615892,9.1215299191491,3.06633274931766,3.79706263827252,2.38162267109529,0,0,0,0.993943903390637,0.886413581652058,0.397227542439656,2.0078563452417,0.354668382198357,3.92474320099615,0,0,3.42332138939743,1.0776853765575,0.980771418680752,1.51357427644931,2.30470369792,0,1.24864030732128,0,0.747243402759005,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,2.87447256726495,0,0.125118519871964,0,0.438977620880838,1.22595118319608,1.50238058906597,0.680593098960126,0.179389635688862,1.06778694409284,1.27159140695737,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0.506328996723799,0.292311015483596,0,0.460249493211497,0.484938170456436,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,13.2867981832437,8.41450642820675,7.8199062152966,11.7606969108434,0,0,3.54473944008842,0,0,0.514703430895577,0,0,0,0,0,0,0,0,1.40890433082986,7.21832238805369,6.01881166349594,6.84914948044554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34557301214433,1.74384027533312,0.7333828582095,3.36106460970222,14.3062578340753,0.845302752556,4.5209479819428,2.08014873822732,0.771622122786426,1.41849132023278,0,1.71573592389777,2.17048642156577,0.823240336780769,0.65147236858747,1.77695974371273,0.791951872933429,0,0,0,0,0,0,3.83399768786532,1.14861935834114,0,0.868687840005475,0,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,1.34960640891054,4.50153468953709,0,2.49565033836969,0.713715955188647,0.157702415033935,0.234282829985426,0.300946099727719,0,1.03473071292505,0,1.10621501125022,0.347534457872331,0.587403472388222,1.71571711905428,0,1.07857100409308,0.533637789017222,0.909382714338778,3.32870879020994,3.62868351995616,4.46594054073798,3.06923946576125,1.40330047216537,6.27881831352935,1.53512174720011,2.73451665944133,4.45254199334973,6.9394362211195,8.70052454034323,5.74890092096664,8.30807086693794,4.76462551685833,0,0,0,0.229628896329213,0.728364672026868,2.36023946926963,0,0,0,0,0.105551628892876,3.4120015221269,3.91215522135986,8.42072072798343,35.4722681187666,1.35473218771926,2.50844886927427,0,0,0,0,0,0,0.656029291399411,0.325378394664303,2.36994326789761,0,0,0,0,0,0.96670718292122,1.69453478826109,2.76306614507033,0.275673144969061,1.39646318328756,1.88521702088497,2.30111894023472,1.60257664164127,0,0,0,0,0,3.46293581513704,0,0,1.06461206063404,0.869932992075073,0,0,1.116475108079,3.48017367190598,5.14701523594327,1.79128453917934,0.855877976067841,2.22742273548156,0,4.67668389716618,6.03981465419321,4.83030849617314,1.41527737101321,0,1.26377536871694,0.975267478179181,0,0,1.36499911407986,1.69686518344455,1.13008116620243,0.551365343546124,0,0,6.36653087693356,3.27947376023316,0,0.6196469961995,0.281695602532241,0.573645408816206,1.27723753317057,0.7133421029625,1.06428319221179,0.633322905892992,2.96365403663912,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0,0.23874448473769,0,0,0.994147647766298,0.562677665642051,0,0,0,4.18420775327246,0.828851746593443,0,0,2.70786572014353,0.933118762985422,0,0,0,2.07151151837561,0,2.22273980289274,0,1.20598527610407,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,3.77056266668606,0,0,0,0,2.55200927785536,1.37396390102793,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85760885457012,0.611030144933625,0,0,0,0.539209063845416,0,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| ||
|short_description=p4@LRRC32 | |||
}} | }} |
Latest revision as of 08:06, 20 September 2015
Short description: | p4@LRRC32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRRC32_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000260061, ENST00000404995, NM_001128922, uc001oxr.3_5end |
EntrezGene: | LRRC32 |
HGNC: | 4161 |
UniProt: | Q14392 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.31e-20 | 36 |
endothelial cell of vascular tree | 4.86e-20 | 24 |
meso-epithelial cell | 1.77e-15 | 45 |
blood vessel endothelial cell | 1.33e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-13 | 18 |
mesodermal cell | 1.56e-13 | 121 |
preadipocyte | 6.48e-13 | 12 |
lining cell | 9.07e-10 | 58 |
barrier cell | 9.07e-10 | 58 |
lymphangioblast | 2.97e-08 | 6 |
endothelial cell of lymphatic vessel | 2.97e-08 | 6 |
vascular lymphangioblast | 2.97e-08 | 6 |
vein endothelial cell | 1.18e-07 | 6 |