FFCP PHASE1:Hg19::chr12:109017012..109017026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:109017012..109017026,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr12:109017012..109017026,- | |||
|id=chr12:109017012..109017026,- | |||
|ontology_enrichment_celltype=CL:0000738!5.18e-32!140;CL:0002032!9.39e-30!165;CL:0000837!9.39e-30!165;CL:0000037!9.39e-30!172;CL:0000566!9.39e-30!172;CL:0000766!6.04e-27!76;CL:0000988!7.41e-27!182;CL:0002031!8.94e-27!124;CL:0002087!1.29e-25!119;CL:0000763!1.86e-24!112;CL:0000049!1.86e-24!112;CL:0000839!1.05e-23!70;CL:0000557!3.44e-23!71;CL:0002194!5.82e-21!63;CL:0000576!5.82e-21!63;CL:0000040!5.82e-21!63;CL:0000559!5.82e-21!63;CL:0002009!5.67e-20!65;CL:0002057!6.08e-15!42;CL:0000860!1.91e-13!45;CL:0000134!6.87e-08!358;CL:0002320!2.32e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.20e-22;3!CL:0002619;2.43e-21;3!CL:0000097;4.86e-13;5!CL:0000766;2.86e-10;69!CL:0000094;8.25e-09;8!CL:0000163;1.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.20e-22,3;CL:0002619,2.53e-21,3;CL:0000766,2.86e-21,72;CL:0000839,6.60e-15,66;CL:0000557,1.19e-14,67;CL:0000738,1.49e-14,136;CL:0000763,3.28e-13,108;CL:0000049,3.28e-13,108;CL:0000097,4.40e-13,5;CL:0002028,4.40e-13,5;CL:0002032,9.80e-12,161;CL:0000837,9.80e-12,161;CL:0002031,2.20e-11,120;CL:0000037,4.27e-11,168;CL:0000988,2.39e-10,177;CL:0002194,8.52e-10,59;CL:0000576,8.52e-10,59;CL:0000040,8.52e-10,59;CL:0000559,8.52e-10,59;CL:0002009,1.99e-09,61;CL:0000094,8.26e-09,8;CL:0002087,1.52e-07,115;CL:0000163,1.75e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;5.49e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.35e-23!102;UBERON:0003061!7.35e-23!102;UBERON:0002193!1.39e-21!112;UBERON:0002371!2.69e-20!80;UBERON:0002405!1.15e-19!115;UBERON:0001474!5.32e-18!86;UBERON:0004765!2.99e-15!101;UBERON:0001434!2.99e-15!101;UBERON:0002384!4.73e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.96e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.48e-13,93;UBERON:0002193,4.56e-13,108;UBERON:0002390,9.02e-13,98;UBERON:0003061,9.02e-13,98;UBERON:0002371,1.18e-12,76;UBERON:0001474,1.45e-11,82;UBERON:0004765,2.46e-10,90;UBERON:0001434,4.49e-09,100;UBERON:0000029,3.57e-08,1 | |||
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| ||
|short_description=p@chr12:109017012..109017026,- | |||
}} | }} |
Latest revision as of 04:38, 24 July 2015
Short description: | p@chr12:109017012..109017026, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109017012..109017026, - |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.20e-22 | 3 |
adult endothelial progenitor cell | 2.53e-21 | 3 |
myeloid leukocyte | 2.86e-21 | 72 |
myeloid lineage restricted progenitor cell | 6.60e-15 | 66 |
granulocyte monocyte progenitor cell | 1.19e-14 | 67 |
leukocyte | 1.49e-14 | 136 |
myeloid cell | 3.28e-13 | 108 |
common myeloid progenitor | 3.28e-13 | 108 |
mast cell | 4.40e-13 | 5 |
basophil mast progenitor cell | 4.40e-13 | 5 |
hematopoietic oligopotent progenitor cell | 9.80e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.80e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 2.20e-11 | 120 |
hematopoietic stem cell | 4.27e-11 | 168 |
hematopoietic cell | 2.39e-10 | 177 |
monopoietic cell | 8.52e-10 | 59 |
monocyte | 8.52e-10 | 59 |
monoblast | 8.52e-10 | 59 |
promonocyte | 8.52e-10 | 59 |
macrophage dendritic cell progenitor | 1.99e-09 | 61 |
granulocyte | 8.26e-09 | 8 |
nongranular leukocyte | 1.52e-07 | 115 |
endocrine cell | 1.75e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.48e-13 | 93 |
hemolymphoid system | 4.56e-13 | 108 |
hematopoietic system | 9.02e-13 | 98 |
blood island | 9.02e-13 | 98 |
bone marrow | 1.18e-12 | 76 |
bone element | 1.45e-11 | 82 |
skeletal element | 2.46e-10 | 90 |
skeletal system | 4.49e-09 | 100 |
lymph node | 3.57e-08 | 1 |