FFCP PHASE1:Hg19::chr12:52306161..52306194,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:52306161..52306194,+ to FFCP PHASE1:Hg19::chr12:52306161..52306194,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=94 | |EntrezGene=94 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=175 | |HGNC=175 | ||
|TSSclassifier=strong | |||
|UniProt=E7EN07 | |UniProt=E7EN07 | ||
|association_with_transcript=6bp_to_ENST00000419526,ENST00000548659_5end | |||
|cluster_id=chr12:52306161..52306194,+ | |||
|coexpression_cluster_id=C3289 | |||
|description=CAGE_peak_3_at_ACVRL1_5end | |||
|id=chr12:52306161..52306194,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.22e-25!35;CL:0002139!2.44e-21!24;CL:0002078!8.47e-21!44;CL:0000071!1.61e-16!18;CL:0002546!1.61e-16!18;CL:0000213!1.81e-13!57;CL:0000215!1.81e-13!57;CL:1000413!4.89e-09!9;CL:0000222!6.31e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.61e-43;24!CL:0000115;5.25e-35;36!CL:0000071;1.11e-32;18!CL:0002078;5.30e-21;45!CL:1000413;4.35e-17;9!CL:0000213;3.47e-14;58!CL:0000215;3.47e-14;58!CL:0002543;5.25e-12;6!CL:0002544;7.57e-12;6!CL:0002138;1.51e-11;6!CL:0000235;4.24e-10;6!CL:0002188;1.35e-09;5!CL:0002144;7.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.99e-43,24;CL:0000115,3.98e-42,36;CL:0000071,1.18e-32,18;CL:0002546,1.18e-32,18;CL:0002078,1.42e-31,45;CL:0000213,3.37e-22,58;CL:0000215,3.37e-22,58;CL:1000413,4.50e-17,9;CL:0002543,5.32e-12,6;CL:0002544,7.68e-12,6;CL:0005020,1.47e-11,6;CL:0002138,1.47e-11,6;CL:0005022,1.47e-11,6;CL:0000222,9.74e-11,121;CL:0000235,3.78e-10,6;CL:0002188,1.28e-09,5;CL:0002144,7.81e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.11e-32;18!CL:0005022;1.51e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-22!115;UBERON:0001986!1.61e-16!18;UBERON:0004638!1.61e-16!18;UBERON:0004852!1.61e-16!18;UBERON:0000477!2.68e-13!286;UBERON:0004111!4.42e-13!241;UBERON:0000487!7.40e-12!22;UBERON:0000025!1.20e-11!194;UBERON:0000055!1.52e-11!69;UBERON:0006914!2.78e-11!25;UBERON:0002049!1.20e-10!79;UBERON:0007798!1.20e-10!79;UBERON:0000468!2.41e-10!659;UBERON:0000467!7.48e-10!625;UBERON:0000480!1.01e-09!626;UBERON:0001009!2.30e-09!113;UBERON:0003915!4.89e-09!9;UBERON:0004700!4.89e-09!9;UBERON:0001917!4.89e-09!9;UBERON:0004872!7.69e-09!84;UBERON:0002465!1.88e-08!10;UBERON:0004535!1.90e-08!110;UBERON:0001981!6.73e-08!60;UBERON:0007500!6.73e-08!60;UBERON:0004537!6.73e-08!60;UBERON:0006965!6.73e-08!60;UBERON:0001049!8.28e-08!57;UBERON:0005068!8.28e-08!57;UBERON:0006241!8.28e-08!57;UBERON:0007135!8.28e-08!57;UBERON:0003081!1.74e-07!216;UBERON:0001473!1.83e-07!8;UBERON:0004536!1.83e-07!8;UBERON:0006558!1.83e-07!8;UBERON:0000922!3.03e-07!612;UBERON:0001017!5.41e-07!82;UBERON:0000955!7.42e-07!69;UBERON:0006238!7.42e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.11e-32;18!UBERON:0001986;1.11e-32;18!UBERON:0004852;1.11e-32;18!UBERON:0000487;1.31e-25;22!UBERON:0006914;8.35e-22;25!UBERON:0003915;4.35e-17;9!UBERON:0004700;4.35e-17;9!UBERON:0001917;4.35e-17;9!UBERON:0000490;5.45e-14;33!UBERON:0000055;1.41e-13;65!UBERON:0001473;3.35e-11;8!UBERON:0004536;3.35e-11;8!UBERON:0006558;3.35e-11;8!UBERON:0002465;5.96e-11;10!UBERON:0007500;6.85e-10;56!UBERON:0001981;6.85e-10;56!UBERON:0004537;6.85e-10;56!UBERON:0001638;7.05e-10;9!UBERON:0003920;7.05e-10;9!UBERON:0004582;7.05e-10;9!UBERON:0002049;2.49e-09;75!UBERON:0007798;2.49e-09;75!UBERON:0003914;1.20e-07;74!UBERON:0001637;5.32e-07;42!UBERON:0003509;5.32e-07;42!UBERON:0004572;5.32e-07;42!UBERON:0010523;7.72e-07;3!UBERON:0001915;7.72e-07;3!UBERON:0001982;7.72e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.18e-32,18;UBERON:0001986,1.18e-32,18;UBERON:0004852,1.18e-32,18;UBERON:0000487,1.37e-25,22;UBERON:0000055,3.17e-24,68;UBERON:0006914,8.68e-22,25;UBERON:0002049,1.12e-19,78;UBERON:0007798,1.12e-19,78;UBERON:0007500,3.40e-17,59;UBERON:0001981,3.40e-17,59;UBERON:0004537,3.40e-17,59;UBERON:0006965,3.40e-17,59;UBERON:0003915,4.50e-17,9;UBERON:0004700,4.50e-17,9;UBERON:0001917,4.50e-17,9;UBERON:0004872,7.18e-15,83;UBERON:0001009,7.16e-14,112;UBERON:0004111,2.21e-13,240;UBERON:0004535,8.12e-13,109;UBERON:0000025,1.69e-12,192;UBERON:0003914,6.81e-12,117;UBERON:0007023,1.01e-11,114;UBERON:0001473,3.56e-11,8;UBERON:0004536,3.56e-11,8;UBERON:0006558,3.56e-11,8;UBERON:0002465,4.28e-11,10;UBERON:0001638,5.63e-10,9;UBERON:0003920,5.63e-10,9;UBERON:0004582,5.63e-10,9;UBERON:0001637,3.88e-07,42;UBERON:0003509,3.88e-07,42;UBERON:0004572,3.88e-07,42;UBERON:0003081,4.04e-07,203;UBERON:0010523,7.81e-07,3;UBERON:0001915,7.81e-07,3;UBERON:0001982,7.81e-07,3;UBERON:0002298,8.79e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,1.08505435357926,0.671746422719773,0.971680998056939,0.77272670290256,0.290796477559129,0.377875943688809,0.485168122375632,0.232429036905685,0,0.619412741790207,0,0,0,0,0.645484683583826,1.35426486594342,0.188242339542605,0.545812300115692,0,0.612167784741805,0.641858054152187,0,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0.422510572623884,0.637812899895131,0.628975936525128,0.44931452458598,0.450530678524519,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,0.361439152384566,0,0.289693037921647,0,0.973269740605272,0,0,0,4.1913304159268,0,0,0.649094787309367,0.348259474598534,0.132957960518865,0,0,0,5.16782259153433,6.881876760849,7.63709103536707,5.6530794192401,6.71199097935849,13.7559020970034,8.35979866147242,16.0218390684984,13.1633517194083,5.35552980423472,10.876391561947,6.84244895146661,6.58967555380058,3.30896772311282,26.7346842800981,5.62588288189703,5.38870494302808,5.29273958271614,10.7321646226118,10.4419222552494,14.4729377705022,0,0,0,0,0,0,0.573673241497627,0.709336764396714,0,2.1349799145941,0,0,0.538842688278752,0.326923806226917,0.151357427644931,0.576175924479999,0.70296429550139,0.312160076830321,1.1409436430889,0.896692083310806,0,0,0.140450806702248,0.408308342509787,0.859840221182376,0.309977343527296,0,0,0.910161361938026,2.15585442544872,0.336672227908132,0.875829639103749,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0.675105328965065,0.194874010322397,0.504867548488229,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85786545549578,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,2.59859605969933,2.31492756288305,5.32711626256875,0,0,1.96973604869918,3.97807250736704,4.45893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.784917590417525,0,1.0267360014933,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,1.2162378064119,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0.532685175939381,0.246381468041427,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,14.7853399292166,12.5869341904622,2.37507507712353,7.71136263451447,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0.096670718292122,0.462145851343933,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,1.23213432070436,2.12922412126809,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.636406495851874,1.56989728039846,0.179872457583315,0.274537029736055,0.706874414074119,0.606547444719948,0,0,0,1.46228093778771,0,0,0.282810863907425,0,0,3.98063385144732,2.19225442626881,1.15755106853338,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.383010740264733,0,0,0,0.228234679033192,0,0,0.338583555603207,0,0,0.425846237690326,0,1.53620382154229,0.671028323677248,0.166849141711909,0.390776190804081,0,0,0,0,0,0,5.12778627451629,0,0.66866030566487,0,0,0,0,0,1.1253553312841,0,0,0.211125408127993,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.556608588971108,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0.583209226766509,0,0,0.964771509003264,0,0.774054819518572,0.295547618953547,1.31631238292384,0.21787692703798,0,0.846452843541768,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0.995261931078505,2.56526937059684,1.83309043480088,0,0,0,0.67401132980677,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0.61214552326098,1.0741718536843,0.60129367765797,0.72581733978073,0,0,0,0,0.569219092059585,1.24807205711825,0,0,0,0.52418000472609,0,0,0,0,1.45483524732629,0,1.80784592624426,0.274083849293502,0.794858446811959,0.379864775735272,0.195551382734803,0,2.13452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,1.63085047288337,1.46443984837266,4.07992870545287,0,0,1.9166753044879,0,0,0,0,0.458320848023367,3.58936512288407,0.599037001496973,1.28767814440971,1.33902874465124,0.671834724867263,0,0,0,0,0,0,0,0,2.04305109167363,0.160753148465019,0,0,0.2249738915515,0,0.364497339948148,0,0.709251365692784,0.577000469484979,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0.906496732161005,1.90517903781507,0,1.29282956361551,2.644652034853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| ||
|short_description=p3@ACVRL1 | |||
}} | }} |
Latest revision as of 20:44, 18 September 2015
Short description: | p3@ACVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ACVRL1_5end |
Coexpression cluster: | C3289_lung_Endothelial_Renal_Hepatic_Lymphatic_adipose_breast |
Association with transcript: | 6bp_to_ENST00000419526, ENST00000548659_5end |
EntrezGene: | ACVRL1 |
HGNC: | 175 |
UniProt: | E7EN07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.99e-43 | 24 |
endothelial cell | 3.98e-42 | 36 |
blood vessel endothelial cell | 1.18e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.18e-32 | 18 |
meso-epithelial cell | 1.42e-31 | 45 |
lining cell | 3.37e-22 | 58 |
barrier cell | 3.37e-22 | 58 |
endothelial cell of artery | 4.50e-17 | 9 |
vein endothelial cell | 5.32e-12 | 6 |
aortic endothelial cell | 7.68e-12 | 6 |
lymphangioblast | 1.47e-11 | 6 |
endothelial cell of lymphatic vessel | 1.47e-11 | 6 |
vascular lymphangioblast | 1.47e-11 | 6 |
mesodermal cell | 9.74e-11 | 121 |
macrophage | 3.78e-10 | 6 |
glomerular endothelial cell | 1.28e-09 | 5 |
capillary endothelial cell | 7.81e-07 | 3 |