FFCP PHASE1:Hg19::chr12:6561190..6561312,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:6561190..6561312,+ to FFCP PHASE1:Hg19::chr12:6561190..6561312,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55080 | |EntrezGene=55080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30683 | |HGNC=30683 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BX59,G3V1T3 | |UniProt=Q9BX59,G3V1T3 | ||
|association_with_transcript=0bp_to_ENST00000266556,ENST00000544021,ENST00000544826_5end | |||
|cluster_id=chr12:6561190..6561312,+ | |||
|description=CAGE_peak_1_at_TAPBPL_5end | |||
|id=chr12:6561190..6561312,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.79e-29!140;CL:0002031!1.23e-23!124;CL:0002087!4.12e-22!119;CL:0000988!5.80e-22!182;CL:0000037!1.15e-20!172;CL:0000566!1.15e-20!172;CL:0002032!7.28e-19!165;CL:0000837!7.28e-19!165;CL:0000766!8.83e-19!76;CL:0000839!2.90e-15!70;CL:0000557!6.48e-15!71;CL:0002009!1.45e-14!65;CL:0002057!2.59e-14!42;CL:0002194!3.40e-14!63;CL:0000576!3.40e-14!63;CL:0000040!3.40e-14!63;CL:0000559!3.40e-14!63;CL:0002320!2.48e-11!365;CL:0000860!2.92e-11!45;CL:0000763!3.07e-11!112;CL:0000049!3.07e-11!112;CL:0000134!1.27e-10!358;CL:0000838!2.11e-08!52;CL:0000542!6.79e-08!53;CL:0000051!6.79e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.61e-10;48!CL:0000473;1.04e-09;39!CL:0000234;1.04e-09;39!CL:0000766;1.76e-09;69!CL:0000860;9.65e-09;33!CL:0002057;9.65e-09;33!CL:0000738;1.32e-07;136!CL:0002087;3.11e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.60e-32,136;CL:0002031,1.70e-26,120;CL:0002087,6.40e-25,115;CL:0000988,1.80e-24,177;CL:0000037,7.68e-23,168;CL:0000766,3.74e-22,72;CL:0002032,5.73e-21,161;CL:0000837,5.73e-21,161;CL:0000839,2.30e-18,66;CL:0000557,6.12e-18,67;CL:0002009,1.01e-17,61;CL:0002194,2.29e-17,59;CL:0000576,2.29e-17,59;CL:0000040,2.29e-17,59;CL:0000559,2.29e-17,59;CL:0000473,4.80e-17,48;CL:0000234,4.80e-17,48;CL:0000860,2.53e-14,42;CL:0002057,2.53e-14,42;CL:0000763,3.91e-13,108;CL:0000049,3.91e-13,108;CL:0002320,1.92e-12,361;CL:0000134,1.07e-11,354;CL:0000838,2.09e-08,52;CL:0000542,6.71e-08,53;CL:0000051,6.71e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.16e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.60e-23!112;UBERON:0002390!9.48e-23!102;UBERON:0003061!9.48e-23!102;UBERON:0002405!1.22e-15!115;UBERON:0002371!5.76e-15!80;UBERON:0001474!6.86e-12!86;UBERON:0002384!6.87e-11!375;UBERON:0003081!1.28e-10!216;UBERON:0004765!2.05e-09!101;UBERON:0001434!2.05e-09!101;UBERON:0000178!5.59e-08!15;UBERON:0000179!5.59e-08!15;UBERON:0000463!5.59e-08!15;UBERON:0007023!3.57e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.71e-08;15!UBERON:0000179;5.71e-08;15!UBERON:0000463;5.71e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.63e-26,98;UBERON:0003061,6.63e-26,98;UBERON:0002193,7.96e-26,108;UBERON:0002405,2.46e-19,93;UBERON:0002371,9.08e-18,76;UBERON:0001474,3.45e-14,82;UBERON:0004765,1.79e-13,90;UBERON:0003081,1.07e-12,203;UBERON:0002384,5.45e-12,371;UBERON:0001434,1.58e-11,100;UBERON:0000178,5.52e-08,15;UBERON:0000179,5.52e-08,15;UBERON:0000463,5.52e-08,15;UBERON:0007023,3.00e-07,114 | |||
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| ||
|short_description=p1@TAPBPL | |||
}} | }} |
Latest revision as of 22:21, 19 September 2015
Short description: | p1@TAPBPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAPBPL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266556, ENST00000544021, ENST00000544826_5end |
EntrezGene: | TAPBPL |
HGNC: | 30683 |
UniProt: | Q9BX59G3V1T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.60e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 1.70e-26 | 120 |
nongranular leukocyte | 6.40e-25 | 115 |
hematopoietic cell | 1.80e-24 | 177 |
hematopoietic stem cell | 7.68e-23 | 168 |
myeloid leukocyte | 3.74e-22 | 72 |
hematopoietic oligopotent progenitor cell | 5.73e-21 | 161 |
hematopoietic multipotent progenitor cell | 5.73e-21 | 161 |
myeloid lineage restricted progenitor cell | 2.30e-18 | 66 |
granulocyte monocyte progenitor cell | 6.12e-18 | 67 |
macrophage dendritic cell progenitor | 1.01e-17 | 61 |
monopoietic cell | 2.29e-17 | 59 |
monocyte | 2.29e-17 | 59 |
monoblast | 2.29e-17 | 59 |
promonocyte | 2.29e-17 | 59 |
defensive cell | 4.80e-17 | 48 |
phagocyte | 4.80e-17 | 48 |
classical monocyte | 2.53e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.53e-14 | 42 |
myeloid cell | 3.91e-13 | 108 |
common myeloid progenitor | 3.91e-13 | 108 |
connective tissue cell | 1.92e-12 | 361 |
mesenchymal cell | 1.07e-11 | 354 |
lymphoid lineage restricted progenitor cell | 2.09e-08 | 52 |
lymphocyte | 6.71e-08 | 53 |
common lymphoid progenitor | 6.71e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.63e-26 | 98 |
blood island | 6.63e-26 | 98 |
hemolymphoid system | 7.96e-26 | 108 |
immune system | 2.46e-19 | 93 |
bone marrow | 9.08e-18 | 76 |
bone element | 3.45e-14 | 82 |
skeletal element | 1.79e-13 | 90 |
lateral plate mesoderm | 1.07e-12 | 203 |
connective tissue | 5.45e-12 | 371 |
skeletal system | 1.58e-11 | 100 |
blood | 5.52e-08 | 15 |
haemolymphatic fluid | 5.52e-08 | 15 |
organism substance | 5.52e-08 | 15 |
adult organism | 3.00e-07 | 114 |