FFCP PHASE1:Hg19::chr12:79258463..79258477,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:79258463..79258477,+ to FFCP PHASE1:Hg19::chr12:79258463..79258477,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt=P21579,Q6AI31 | |UniProt=P21579,Q6AI31 | ||
|association_with_transcript=14bp_to_ENST00000261205,NM_005639,uc001syt.2,uc001syu.2_5end | |||
|cluster_id=chr12:79258463..79258477,+ | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_10_at_SYT1_5end | |||
|id=chr12:79258463..79258477,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.61e-16;3!UBERON:0006601;1.13e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.25e-49!94;UBERON:0001016!2.25e-49!94;UBERON:0005743!1.08e-45!86;UBERON:0001017!2.07e-45!82;UBERON:0000955!1.39e-43!69;UBERON:0006238!1.39e-43!69;UBERON:0001049!1.19e-36!57;UBERON:0005068!1.19e-36!57;UBERON:0006241!1.19e-36!57;UBERON:0007135!1.19e-36!57;UBERON:0002616!1.86e-36!59;UBERON:0002780!8.32e-34!41;UBERON:0001890!8.32e-34!41;UBERON:0006240!8.32e-34!41;UBERON:0002346!2.48e-33!90;UBERON:0003080!1.05e-32!42;UBERON:0003075!7.73e-32!86;UBERON:0007284!7.73e-32!86;UBERON:0000033!5.06e-31!123;UBERON:0000924!1.79e-30!173;UBERON:0006601!1.79e-30!173;UBERON:0004121!5.35e-29!169;UBERON:0003056!1.15e-28!61;UBERON:0000153!1.50e-28!129;UBERON:0007811!1.50e-28!129;UBERON:0001869!2.29e-26!32;UBERON:0001893!4.88e-26!34;UBERON:0002020!5.69e-26!34;UBERON:0003528!5.69e-26!34;UBERON:0002791!8.80e-25!33;UBERON:0002619!1.31e-24!22;UBERON:0001950!2.76e-22!20;UBERON:0000956!7.60e-21!25;UBERON:0000203!7.60e-21!25;UBERON:0007023!1.48e-15!115;UBERON:0000475!2.33e-11!365;UBERON:0000025!8.73e-10!194;UBERON:0001894!2.10e-09!7;UBERON:0006222!2.10e-09!7;UBERON:0000200!4.76e-09!6;UBERON:0001871!6.96e-09!7;UBERON:0000477!3.68e-08!286;UBERON:0000119!4.59e-08!312;UBERON:0004733!4.74e-08!12;UBERON:0002028!4.74e-08!12;UBERON:0007277!4.74e-08!12;UBERON:0001872!7.73e-08!5;UBERON:0000349!8.06e-08!5;UBERON:0004111!1.14e-07!241;UBERON:0000483!1.17e-07!309;UBERON:0000064!2.78e-07!219;UBERON:0004732!2.97e-07!13;UBERON:0000922!2.98e-07!612;UBERON:0000481!3.07e-07!347;UBERON:0002420!4.21e-07!9;UBERON:0007245!4.21e-07!9;UBERON:0010009!4.21e-07!9;UBERON:0010011!4.21e-07!9;UBERON:0000454!4.21e-07!9;UBERON:0002680!5.61e-07!9;UBERON:0001895!5.61e-07!9;UBERON:0010092!5.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.90e-60;22!UBERON:0001950;7.63e-59;20!UBERON:0001869;7.67e-57;32!UBERON:0002791;3.24e-53;32!UBERON:0000956;7.22e-53;25!UBERON:0000203;7.22e-53;25!UBERON:0001893;5.95e-51;34!UBERON:0003528;1.71e-47;34!UBERON:0002020;1.71e-47;34!UBERON:0002780;3.83e-43;41!UBERON:0001890;3.83e-43;41!UBERON:0000073;1.75e-38;53!UBERON:0002616;1.75e-38;53!UBERON:0000955;8.49e-29;68!UBERON:0001017;8.54e-25;75!UBERON:0001016;1.67e-23;83!UBERON:0000200;5.88e-21;6!UBERON:0001871;1.48e-18;6!UBERON:0000349;1.85e-16;5!UBERON:0001872;3.37e-16;5!UBERON:0001870;9.44e-16;3!UBERON:0002420;8.57e-14;9!UBERON:0007245;8.57e-14;9!UBERON:0010009;8.57e-14;9!UBERON:0010011;8.57e-14;9!UBERON:0000454;8.57e-14;9!UBERON:0003296;3.24e-12;4!UBERON:0010133;3.24e-12;4!UBERON:0001905;1.15e-11;2!UBERON:0002757;1.15e-11;2!UBERON:0010134;1.15e-11;2!UBERON:0005408;1.15e-11;2!UBERON:0001899;1.15e-11;2!UBERON:0001876;2.64e-11;2!UBERON:0002702;5.67e-11;2!UBERON:0002021;5.70e-10;5!UBERON:0002680;1.16e-09;9!UBERON:0001895;1.16e-09;9!UBERON:0007023;1.54e-09;114!UBERON:0011216;2.09e-09;132!UBERON:0002037;1.73e-08;6!UBERON:0004733;2.96e-07;12!UBERON:0002028;2.96e-07;12!UBERON:0001894;3.63e-07;7!UBERON:0009663;6.95e-07;7!UBERON:0010314;6.97e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-68,53;UBERON:0002616,3.34e-68,53;UBERON:0002780,2.52e-64,41;UBERON:0001890,2.52e-64,41;UBERON:0003080,2.52e-64,41;UBERON:0006240,2.52e-64,41;UBERON:0001049,2.70e-64,56;UBERON:0005068,2.70e-64,56;UBERON:0006241,2.70e-64,56;UBERON:0007135,2.70e-64,56;UBERON:0001869,4.80e-63,32;UBERON:0002619,3.81e-60,22;UBERON:0000955,1.71e-59,68;UBERON:0006238,1.71e-59,68;UBERON:0001893,3.60e-59,34;UBERON:0001950,1.09e-58,20;UBERON:0002791,7.12e-57,32;UBERON:0001017,2.41e-56,81;UBERON:0003528,2.31e-53,34;UBERON:0002020,2.31e-53,34;UBERON:0000956,9.19e-53,25;UBERON:0000203,9.19e-53,25;UBERON:0001016,3.45e-50,89;UBERON:0003075,3.01e-42,82;UBERON:0007284,3.01e-42,82;UBERON:0003056,7.81e-42,61;UBERON:0002346,5.04e-40,86;UBERON:0010371,4.10e-32,104;UBERON:0010314,3.34e-28,132;UBERON:0007023,1.00e-26,114;UBERON:0004121,2.13e-23,171;UBERON:0000924,2.13e-23,171;UBERON:0006601,2.13e-23,171;UBERON:0000200,6.55e-21,6;UBERON:0011216,1.33e-20,223;UBERON:0001871,2.06e-18,6;UBERON:0000349,2.01e-16,5;UBERON:0001872,2.18e-16,5;UBERON:0001870,9.95e-16,3;UBERON:0000025,1.12e-14,192;UBERON:0002420,8.83e-14,9;UBERON:0007245,8.83e-14,9;UBERON:0010009,8.83e-14,9;UBERON:0010011,8.83e-14,9;UBERON:0000454,8.83e-14,9;UBERON:0003296,3.31e-12,4;UBERON:0010133,3.31e-12,4;UBERON:0001905,1.01e-11,2;UBERON:0002757,1.01e-11,2;UBERON:0010134,1.01e-11,2;UBERON:0005408,1.01e-11,2;UBERON:0001899,1.01e-11,2;UBERON:0001876,3.33e-11,2;UBERON:0002702,7.88e-11,2;UBERON:0004111,1.52e-10,240;UBERON:0002021,7.38e-10,5;UBERON:0002680,1.26e-09,9;UBERON:0001895,1.26e-09,9;UBERON:0010092,1.26e-09,9;UBERON:0002037,1.89e-08,6;UBERON:0006215,1.89e-08,6;UBERON:0004733,3.17e-07,12;UBERON:0002028,3.17e-07,12;UBERON:0007277,3.17e-07,12;UBERON:0001894,3.68e-07,7;UBERON:0006222,3.68e-07,7;UBERON:0000483,5.39e-07,306;UBERON:0009663,6.47e-07,7;UBERON:0000119,7.17e-07,309 | |||
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| ||
|short_description=p10@SYT1 | |||
}} | }} |
Latest revision as of 23:10, 24 September 2015
Short description: | p10@SYT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYT1_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | 14bp_to_ENST00000261205, NM_005639, uc001syt.2, uc001syu.2_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | P21579Q6AI31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data