FFCP PHASE1:Hg19::chr13:49550907..49550927,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:49550907..49550927,+ to FFCP PHASE1:Hg19::chr13:49550907..49550927,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22862 | |EntrezGene=22862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20296 | |HGNC=20296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000337156,uc001vcn.2,uc001vco.2_5end | |||
|cluster_id=chr13:49550907..49550927,+ | |||
|coexpression_cluster_id=C1708 | |||
|description=CAGE_peak_5_at_FNDC3A_5end | |||
|id=chr13:49550907..49550927,+ | |||
|ontology_enrichment_celltype=CL:0000860!7.33e-21!45;CL:0002057!3.51e-19!42;CL:0000766!6.43e-18!76;CL:0000557!4.34e-17!71;CL:0000738!4.66e-16!140;CL:0002009!1.18e-15!65;CL:0000839!1.19e-15!70;CL:0002031!2.62e-15!124;CL:0002194!7.18e-15!63;CL:0000576!7.18e-15!63;CL:0000040!7.18e-15!63;CL:0000559!7.18e-15!63;CL:0002087!8.11e-14!119;CL:0002032!4.69e-08!165;CL:0000837!4.69e-08!165;CL:0000037!1.30e-07!172;CL:0000566!1.30e-07!172;CL:0000763!8.05e-07!112;CL:0000049!8.05e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-33;33!CL:0002057;1.12e-33;33!CL:0000473;3.04e-23;39!CL:0000234;3.04e-23;39!CL:0000576;9.37e-15;48!CL:0000766;1.08e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.53e-28,42;CL:0002057,5.53e-28,42;CL:0000473,6.91e-25,48;CL:0000234,6.91e-25,48;CL:0000557,1.60e-20,67;CL:0000766,1.70e-20,72;CL:0000839,1.37e-19,66;CL:0002009,3.64e-18,61;CL:0002194,1.02e-17,59;CL:0000576,1.02e-17,59;CL:0000040,1.02e-17,59;CL:0000559,1.02e-17,59;CL:0002031,2.39e-13,120;CL:0000738,2.98e-12,136;CL:0000763,1.34e-10,108;CL:0000049,1.34e-10,108;CL:0002087,1.68e-10,115;CL:0002032,2.55e-08,161;CL:0000837,2.55e-08,161;CL:0000037,1.81e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.29e-14!80;UBERON:0001474!7.97e-12!86;UBERON:0004765!2.90e-11!101;UBERON:0001434!2.90e-11!101;UBERON:0002390!3.82e-10!102;UBERON:0003061!3.82e-10!102;UBERON:0002405!5.71e-10!115;UBERON:0002193!3.90e-09!112;UBERON:0000062!6.52e-08!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.61e-11;9!UBERON:0001557;1.61e-11;9!UBERON:0003296;8.69e-07;4!UBERON:0010133;8.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.34e-18,76;UBERON:0001474,8.13e-16,82;UBERON:0004765,3.27e-15,90;UBERON:0002405,2.20e-14,93;UBERON:0001434,1.66e-12,100;UBERON:0001737,7.81e-12,9;UBERON:0002390,2.16e-11,98;UBERON:0003061,2.16e-11,98;UBERON:0002193,8.86e-11,108;UBERON:0003296,6.11e-07,4;UBERON:0010133,6.11e-07,4 | |||
|phase1_expression=0.363356758541113,0,0,1.0007329835313,0,0,0,1.26343974685366,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0,1.32558950291166,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.229240217243854,0.246301768349837,0.629686250509434,0.786728553697808,1.15148819429164,0.154816123316076,0,0,0,0,0.142169232487422,0,1.66198622559563,0.802177789880567,0.868043482863407,0.223915474239924,0.647787332037959,0.515151135268373,2.61716829803216,3.40088349319928,0.970336244751265,5.11343881192506,6.98985409637104,13.6270803193846,3.74000110018796,4.86705342405291,5.91205574721463,11.3766074643084,10.3277549373412,5.41705946377367,4.70605848856512,8.18718450173537,8.09004544002305,11.3251040177234,9.30694178520671,13.4260796417799,0.329851300186716,1.99463657621632,1.27867425159808,2.90209238628584,9.64554881974938,3.73693349397345,6.78371396193207,6.25779502104242,7.38442071997397,1.21079900526674,8.47038562771399,5.06339819905415,0.845021145247767,0.637812899895131,0.209658645508376,2.13424399178341,1.05123824989054,0.964353520182481,0.570025487482497,0,0,1.75996244461323,0,0.889509253863555,1.28019066769952,0.400395987036012,1.72425731986345,1.32208974556972,0,0,0.587237189370939,2.29363936875137,0,2.24203425192614,0,0.393419540227666,0.393010762749165,0.205601498999509,1.00311897234407,0,0.473447805734733,0,0.779873198196215,0.589211814949674,0.443067789167242,0.541607727530031,1.0247305578054,0.780356085359269,0.822189523018381,0.829050053357545,0.579606171470105,0.593146252648242,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0.950452044448374,0.752875595388864,0,0,0.236777252044017,0,0.604820229674197,0.802320587350522,0.289648807765598,0,0,0,1.0843174571537,0.50133791063589,0.434539556882471,0,0.486634870302636,0.567208902984407,0.221729397462564,0.702678285545008,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0.794455084879313,0.573673241497627,0,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0.468642863667593,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0,3.0623125688234,0.122834317311768,1.23990937410919,1.18800285728205,0.247266929278557,0,0,0,0.250237039743928,0.554128230968366,0,0.30648779579902,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0.900273288253207,0.103052529238439,0.515281080091258,0.558350568994769,1.35021065793013,0.779496041289589,1.26216887122057,0.184099797284599,2.42469085228218,0.355009592516614,0.604512589365842,0.169560592310488,0,0,0.573609190778008,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,1.77460200059766,2.19160097101532,2.41011029883482,2.64705534557745,4.13970943775572,2.37270619111097,2.69662616320329,1.76599318612811,2.30848294167834,0,0,0,0,0,0,1.77236972004421,0,0,0.514703430895577,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,0,0,0.352226082707465,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,1.87467667973554,0.335964256397719,0.141775097242386,0.806026704325635,0,0,23.6478354190053,2.11316241631742,1.03664057770386,1.44119953416961,0.75745460055828,0.444485260045183,0,0,0,0.102827492703324,0,0,0,0,0,0.775630294546667,0,0,1.59562869950922,0,0.257207374262142,0,0,1.57275793023962,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,1.74306691720059,0.99972991182057,2.43247561282381,0,0,0,0,0,1.01346914667305,0.410952645100767,0.179060963239896,0.224170287987055,0.788123040807709,0.431255149719035,0.256686072559497,0.508189248444927,2.60279707715243,0,0.167516265334349,0.637938751653163,0.749007023947182,2.99161459204025,0.414415513436035,0,0,0.271265023699736,0,1.07057393278297,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0,0.206768026122887,0.647142602455851,0.426910231213777,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0,0.164254312027618,1.03850885836724,0.348631135379878,0.241718899183244,0,0,0.34444334449382,0.182091168006717,0.393373244878272,0,0.385076685522074,0,0,0.422206515571503,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,8.86152700170411,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0.272999822815972,0,0,0.551365343546124,0.66343897524122,0,0,1.31178950409327,0.405820753925408,0,0,0,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,0,0,0,10.5441056869993,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0.185803175125719,0.144269212976445,1.209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| ||
|short_description=p5@FNDC3A | |||
}} | }} |
Latest revision as of 16:29, 17 September 2015
Short description: | p5@FNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FNDC3A_5end |
Coexpression cluster: | C1708_Mast_placenta_CD14_small_pituitary_non_parotid |
Association with transcript: | -11bp_to_ENST00000337156, uc001vcn.2, uc001vco.2_5end |
EntrezGene: | FNDC3A |
HGNC: | 20296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.53e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.53e-28 | 42 |
defensive cell | 6.91e-25 | 48 |
phagocyte | 6.91e-25 | 48 |
granulocyte monocyte progenitor cell | 1.60e-20 | 67 |
myeloid leukocyte | 1.70e-20 | 72 |
myeloid lineage restricted progenitor cell | 1.37e-19 | 66 |
macrophage dendritic cell progenitor | 3.64e-18 | 61 |
monopoietic cell | 1.02e-17 | 59 |
monocyte | 1.02e-17 | 59 |
monoblast | 1.02e-17 | 59 |
promonocyte | 1.02e-17 | 59 |
hematopoietic lineage restricted progenitor cell | 2.39e-13 | 120 |
leukocyte | 2.98e-12 | 136 |
myeloid cell | 1.34e-10 | 108 |
common myeloid progenitor | 1.34e-10 | 108 |
nongranular leukocyte | 1.68e-10 | 115 |
hematopoietic oligopotent progenitor cell | 2.55e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.55e-08 | 161 |
hematopoietic stem cell | 1.81e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.34e-18 | 76 |
bone element | 8.13e-16 | 82 |
skeletal element | 3.27e-15 | 90 |
immune system | 2.20e-14 | 93 |
skeletal system | 1.66e-12 | 100 |
larynx | 7.81e-12 | 9 |
hematopoietic system | 2.16e-11 | 98 |
blood island | 2.16e-11 | 98 |
hemolymphoid system | 8.86e-11 | 108 |
gland of diencephalon | 6.11e-07 | 4 |
neuroendocrine gland | 6.11e-07 | 4 |