FFCP PHASE1:Hg19::chr13:94958134..94958164,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr13:94958134..94958164,+ to FFCP PHASE1:Hg19::chr13:94958134..94958164,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:94958134..94958164,+ | |||
|description=CAGE_peak_at_chr13:94958134..94958164,+ | |||
|id=chr13:94958134..94958164,+ | |||
|ontology_enrichment_celltype=CL:0000188!9.79e-15!9;CL:0000680!2.17e-11!57;CL:0000056!2.17e-11!57;CL:0000355!2.17e-11!57;CL:0002504!3.95e-10!3;CL:1000279!3.95e-10!3;CL:1000280!3.95e-10!3;CL:0000594!8.89e-10!3;CL:0000055!1.81e-08!180;CL:0000187!4.21e-08!54;CL:0002195!3.04e-07!2;CL:0002571!3.04e-07!2;CL:0000183!3.99e-07!59;CL:0000393!5.97e-07!60;CL:0000211!5.97e-07!60;CL:0000515!6.13e-07!4;CL:0002554!6.47e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002504;8.17e-47;3!CL:1000279;8.17e-47;3!CL:1000280;8.17e-47;3!CL:0002195;1.17e-31;2!CL:0002571;1.17e-31;2!CL:0000594;2.28e-21;3!CL:0000680;1.02e-09;7!CL:0000047;8.09e-09;2!CL:0000188;9.36e-08;9!CL:0000723;1.38e-07;61!CL:0000187;2.49e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,6.47e-47,3;CL:1000279,6.47e-47,3;CL:1000280,6.47e-47,3;CL:0002195,1.37e-31,2;CL:0002571,1.37e-31,2;CL:0000594,2.17e-21,3;CL:0000187,7.88e-10,55;CL:0000680,2.62e-09,58;CL:0000056,2.62e-09,58;CL:0000355,2.62e-09,58;CL:0000393,7.76e-09,61;CL:0000211,7.76e-09,61;CL:0000188,9.20e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!7.11e-12!70;UBERON:0002385!4.49e-11!63;UBERON:0001015!4.49e-11!63;UBERON:0000383!4.49e-11!63;UBERON:0000486!1.79e-10!82;UBERON:0001134!2.39e-10!61;UBERON:0002036!2.39e-10!61;UBERON:0003082!2.39e-10!61;UBERON:0005256!1.39e-09!143;UBERON:0000914!3.38e-09!83;UBERON:0002329!3.38e-09!83;UBERON:0003077!3.38e-09!83;UBERON:0003059!3.38e-09!83;UBERON:0007282!3.38e-09!83;UBERON:0009618!3.38e-09!83;UBERON:0007285!3.38e-09!83;UBERON:0000490!8.58e-08!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;4.10e-16;9!UBERON:0000059;2.66e-13;11!UBERON:0002385;1.92e-12;31!UBERON:0001015;1.92e-12;31!UBERON:0000383;1.92e-12;31!UBERON:0001135;6.49e-10;15!UBERON:0000160;2.36e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,3.80e-16,9;UBERON:0000059,2.50e-13,11;UBERON:0001135,6.20e-10,15;UBERON:0005256,2.28e-09,122;UBERON:0001134,1.09e-08,62;UBERON:0002036,1.09e-08,62;UBERON:0003082,1.09e-08,62;UBERON:0002385,2.08e-08,64;UBERON:0001015,2.08e-08,64;UBERON:0000383,2.08e-08,64;UBERON:0000160,2.27e-08,17;UBERON:0000490,1.45e-07,148;UBERON:0002329,1.50e-07,71;UBERON:0003059,1.50e-07,71;UBERON:0007282,1.50e-07,71;UBERON:0004290,1.50e-07,71;UBERON:0009618,1.50e-07,71;UBERON:0003077,1.93e-07,72;UBERON:0007285,1.93e-07,72;UBERON:0007524,2.46e-07,73;UBERON:0003104,6.27e-07,160;UBERON:0009142,6.27e-07,160;UBERON:0007503,7.61e-07,78 | |||
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|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0.845302752556,0,0,0,0,0,4.14636181608628,0,0,2.28015329005615,2.48774364119782,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.895304816199478,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.49076596687656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.410635780069046,0.519254429183621,0,0,0,0,0.918515585316854,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.460511024178389,0.964856007391714,3.00776685631166,2.61030049045611,0.596586391912706,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5250415513906,0,0.42793898803392,0,0,3.77732160924961,3.0199073270966,4.71249609382746,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.23838963263144,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0.776314784381297,0,0,0.521745061811734,0,0.380805212168795,0,0,0.966695013382396,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,1.66847102838104,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:94958134..94958164,+ | |||
}} | }} |
Latest revision as of 17:29, 24 July 2015
Short description: | p@chr13:94958134..94958164, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:94958134..94958164, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 6.47e-47 | 3 |
smooth muscle cell of large intestine | 6.47e-47 | 3 |
smooth muscle cell of colon | 6.47e-47 | 3 |
hepatic stem cell | 1.37e-31 | 2 |
hepatic mesenchymal stem cell | 1.37e-31 | 2 |
skeletal muscle satellite cell | 2.17e-21 | 3 |
muscle cell | 7.88e-10 | 55 |
muscle precursor cell | 2.62e-09 | 58 |
myoblast | 2.62e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.62e-09 | 58 |
electrically responsive cell | 7.76e-09 | 61 |
electrically active cell | 7.76e-09 | 61 |
cell of skeletal muscle | 9.20e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
colon | 3.80e-16 | 9 |
large intestine | 2.50e-13 | 11 |
smooth muscle tissue | 6.20e-10 | 15 |
trunk mesenchyme | 2.28e-09 | 122 |
skeletal muscle tissue | 1.09e-08 | 62 |
striated muscle tissue | 1.09e-08 | 62 |
myotome | 1.09e-08 | 62 |
muscle tissue | 2.08e-08 | 64 |
musculature | 2.08e-08 | 64 |
musculature of body | 2.08e-08 | 64 |
intestine | 2.27e-08 | 17 |
unilaminar epithelium | 1.45e-07 | 148 |
somite | 1.50e-07 | 71 |
presomitic mesoderm | 1.50e-07 | 71 |
presumptive segmental plate | 1.50e-07 | 71 |
dermomyotome | 1.50e-07 | 71 |
trunk paraxial mesoderm | 1.50e-07 | 71 |
paraxial mesoderm | 1.93e-07 | 72 |
presumptive paraxial mesoderm | 1.93e-07 | 72 |
dense mesenchyme tissue | 2.46e-07 | 73 |
mesenchyme | 6.27e-07 | 160 |
entire embryonic mesenchyme | 6.27e-07 | 160 |
epithelial vesicle | 7.61e-07 | 78 |