FFCP PHASE1:Hg19::chr13:99964945..99964955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=337867 | |EntrezGene=337867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |HGNC=20486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_ENST00000460562_5end | |||
|cluster_id=chr13:99964945..99964955,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_13_at_UBAC2_5end | |||
|id=chr13:99964945..99964955,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.88e-49!42;CL:0000860!5.70e-45!45;CL:0002009!2.90e-40!65;CL:0002194!6.36e-39!63;CL:0000576!6.36e-39!63;CL:0000040!6.36e-39!63;CL:0000559!6.36e-39!63;CL:0000557!4.11e-36!71;CL:0000839!3.58e-34!70;CL:0000766!8.57e-31!76;CL:0000763!6.52e-26!112;CL:0000049!6.52e-26!112;CL:0000738!8.46e-23!140;CL:0002087!4.86e-22!119;CL:0002031!1.45e-19!124;CL:0000037!7.08e-19!172;CL:0000566!7.08e-19!172;CL:0000988!3.05e-17!182;CL:0002032!1.21e-16!165;CL:0000837!1.21e-16!165;CL:0000451!4.94e-12!10;CL:0000990!4.57e-11!8;CL:0000840!7.90e-08!5;CL:0001029!7.90e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.44e-66;33!CL:0002057;6.44e-66;33!CL:0000473;6.41e-49;39!CL:0000234;6.41e-49;39!CL:0000576;1.82e-30;48!CL:0000766;8.30e-16;69!CL:0002087;7.74e-10;104!CL:0000763;1.77e-09;100!CL:0001014;5.73e-07;2!CL:0001016;5.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.13e-57,42;CL:0002057,6.13e-57,42;CL:0000473,1.34e-49,48;CL:0000234,1.34e-49,48;CL:0002009,1.91e-43,61;CL:0000557,1.92e-39,67;CL:0002194,2.58e-39,59;CL:0000576,2.58e-39,59;CL:0000040,2.58e-39,59;CL:0000559,2.58e-39,59;CL:0000839,5.17e-35,66;CL:0000766,5.58e-32,72;CL:0002031,3.26e-24,120;CL:0000763,7.35e-24,108;CL:0000049,7.35e-24,108;CL:0002087,3.09e-22,115;CL:0000738,3.86e-21,136;CL:0002032,1.52e-17,161;CL:0000837,1.52e-17,161;CL:0000037,9.95e-17,168;CL:0000988,9.00e-16,177;CL:0001014,6.42e-07,2;CL:0001016,6.42e-07,2;CL:0000134,9.78e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-43;42!CL:0000049;1.26e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.77e-31!80;UBERON:0002390!2.12e-29!102;UBERON:0003061!2.12e-29!102;UBERON:0001474!2.94e-28!86;UBERON:0002193!6.93e-26!112;UBERON:0004765!2.57e-24!101;UBERON:0001434!2.57e-24!101;UBERON:0002405!1.97e-20!115;UBERON:0002204!3.35e-11!167;UBERON:0003081!1.44e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-34,76;UBERON:0001474,5.80e-32,82;UBERON:0002405,6.85e-32,93;UBERON:0002390,3.54e-30,98;UBERON:0003061,3.54e-30,98;UBERON:0004765,5.59e-29,90;UBERON:0002193,3.20e-27,108;UBERON:0001434,6.54e-26,100;UBERON:0002204,9.68e-15,167;UBERON:0003081,1.54e-13,203;UBERON:0000926,6.54e-08,315;UBERON:0004120,6.54e-08,315;UBERON:0006603,6.54e-08,315 | |||
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| ||
|short_description=p13@UBAC2 | |||
}} | }} |
Latest revision as of 08:44, 18 September 2015
Short description: | p13@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBAC2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -81bp_to_ENST00000460562_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.13e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.13e-57 | 42 |
defensive cell | 1.34e-49 | 48 |
phagocyte | 1.34e-49 | 48 |
macrophage dendritic cell progenitor | 1.91e-43 | 61 |
granulocyte monocyte progenitor cell | 1.92e-39 | 67 |
monopoietic cell | 2.58e-39 | 59 |
monocyte | 2.58e-39 | 59 |
monoblast | 2.58e-39 | 59 |
promonocyte | 2.58e-39 | 59 |
myeloid lineage restricted progenitor cell | 5.17e-35 | 66 |
myeloid leukocyte | 5.58e-32 | 72 |
hematopoietic lineage restricted progenitor cell | 3.26e-24 | 120 |
myeloid cell | 7.35e-24 | 108 |
common myeloid progenitor | 7.35e-24 | 108 |
nongranular leukocyte | 3.09e-22 | 115 |
leukocyte | 3.86e-21 | 136 |
hematopoietic oligopotent progenitor cell | 1.52e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-17 | 161 |
hematopoietic stem cell | 9.95e-17 | 168 |
hematopoietic cell | 9.00e-16 | 177 |
CD1a-positive Langerhans cell | 6.42e-07 | 2 |
immature CD1a-positive Langerhans cell | 6.42e-07 | 2 |
mesenchymal cell | 9.78e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.32e-34 | 76 |
bone element | 5.80e-32 | 82 |
immune system | 6.85e-32 | 93 |
hematopoietic system | 3.54e-30 | 98 |
blood island | 3.54e-30 | 98 |
skeletal element | 5.59e-29 | 90 |
hemolymphoid system | 3.20e-27 | 108 |
skeletal system | 6.54e-26 | 100 |
musculoskeletal system | 9.68e-15 | 167 |
lateral plate mesoderm | 1.54e-13 | 203 |
mesoderm | 6.54e-08 | 315 |
mesoderm-derived structure | 6.54e-08 | 315 |
presumptive mesoderm | 6.54e-08 | 315 |