FFCP PHASE1:Hg19::chr14:22465840..22465872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_uc010ajd.1,uc010aje.1_5end | |||
|cluster_id=chr14:22465840..22465872,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_uc010ajd.1_5end,CAGE_peak_1_at_uc010aje.1_5end | |||
|id=chr14:22465840..22465872,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.08e-22!18;CL:0000789!1.08e-22!18;CL:0002420!1.08e-22!18;CL:0002419!1.08e-22!18;CL:0000790!1.08e-22!18;CL:0000084!1.07e-20!25;CL:0000827!1.07e-20!25;CL:0000738!2.87e-17!140;CL:0000625!2.14e-16!11;CL:0002087!1.79e-15!119;CL:0000988!2.56e-12!182;CL:0002031!9.65e-12!124;CL:0000037!1.20e-11!172;CL:0000566!1.20e-11!172;CL:0000838!1.70e-11!52;CL:0000542!3.90e-11!53;CL:0000051!3.90e-11!53;CL:0002032!1.11e-10!165;CL:0000837!1.11e-10!165;CL:0000624!1.30e-09!6;CL:0000080!1.38e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.26e-36;18!CL:0000789;1.26e-36;18!CL:0002419;1.26e-36;18!CL:0000084;2.17e-31;25!CL:0000625;6.44e-26;11!CL:0000624;9.40e-15;6!CL:0000542;1.37e-08;53!CL:0000898;1.68e-08;3!CL:0000226;1.25e-07;3!CL:0000842;1.25e-07;3!CL:0000623;1.38e-07;3!CL:0002619;4.35e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.38e-36,18;CL:0000789,1.38e-36,18;CL:0002420,1.38e-36,18;CL:0002419,1.38e-36,18;CL:0000790,1.38e-36,18;CL:0000084,2.33e-31,25;CL:0000827,2.33e-31,25;CL:0000625,7.02e-26,11;CL:0000838,4.82e-17,52;CL:0000542,1.32e-16,53;CL:0000051,1.32e-16,53;CL:0000624,9.52e-15,6;CL:0000738,2.53e-13,136;CL:0002087,3.27e-12,115;CL:0000988,1.62e-10,177;CL:0000037,4.51e-09,168;CL:0002031,9.80e-09,120;CL:0000898,1.70e-08,3;CL:0002032,1.10e-07,161;CL:0000837,1.10e-07,161;CL:0000226,1.22e-07,3;CL:0000842,1.22e-07,3;CL:0000623,1.34e-07,3;CL:0000825,1.34e-07,3;CL:0002619,4.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.26e-36;18!CL:0000051;1.37e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.20e-21!15;UBERON:0000179!7.20e-21!15;UBERON:0000463!7.20e-21!15;UBERON:0007023!2.14e-19!115;UBERON:0002390!2.04e-12!102;UBERON:0003061!2.04e-12!102;UBERON:0002193!7.27e-12!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.13e-33;15!UBERON:0000179;3.13e-33;15!UBERON:0000463;3.13e-33;15!UBERON:0002390;8.34e-21;32!UBERON:0002193;9.09e-13;42!UBERON:0004177;6.64e-08;5!UBERON:0005057;6.64e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.06e-33,15;UBERON:0000179,3.06e-33,15;UBERON:0000463,3.06e-33,15;UBERON:0002193,3.30e-10,108;UBERON:0002390,5.49e-10,98;UBERON:0003061,5.49e-10,98;UBERON:0004177,1.49e-08,7;UBERON:0005057,1.49e-08,7;UBERON:0003351,9.65e-07,6 | |||
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| ||
|short_description=p1@uc010ajd.1,p1@uc010aje.1 | |||
}} | }} |
Latest revision as of 19:08, 24 July 2015
Short description: | p1@uc010ajd.1, p1@uc010aje.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc010ajd.1_5end, CAGE_peak_1_at_uc010aje.1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 15bp_to_uc010ajd.1, uc010aje.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.38e-36 | 18 |
alpha-beta T cell | 1.38e-36 | 18 |
immature T cell | 1.38e-36 | 18 |
mature T cell | 1.38e-36 | 18 |
immature alpha-beta T cell | 1.38e-36 | 18 |
T cell | 2.33e-31 | 25 |
pro-T cell | 2.33e-31 | 25 |
CD8-positive, alpha-beta T cell | 7.02e-26 | 11 |
lymphoid lineage restricted progenitor cell | 4.82e-17 | 52 |
lymphocyte | 1.32e-16 | 53 |
common lymphoid progenitor | 1.32e-16 | 53 |
CD4-positive, alpha-beta T cell | 9.52e-15 | 6 |
leukocyte | 2.53e-13 | 136 |
nongranular leukocyte | 3.27e-12 | 115 |
hematopoietic cell | 1.62e-10 | 177 |
hematopoietic stem cell | 4.51e-09 | 168 |
hematopoietic lineage restricted progenitor cell | 9.80e-09 | 120 |
naive T cell | 1.70e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.10e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.10e-07 | 161 |
single nucleate cell | 1.22e-07 | 3 |
mononuclear cell | 1.22e-07 | 3 |
natural killer cell | 1.34e-07 | 3 |
pro-NK cell | 1.34e-07 | 3 |
adult endothelial progenitor cell | 4.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.06e-33 | 15 |
haemolymphatic fluid | 3.06e-33 | 15 |
organism substance | 3.06e-33 | 15 |
hemolymphoid system | 3.30e-10 | 108 |
hematopoietic system | 5.49e-10 | 98 |
blood island | 5.49e-10 | 98 |
hemopoietic organ | 1.49e-08 | 7 |
immune organ | 1.49e-08 | 7 |
pharyngeal epithelium | 9.65e-07 | 6 |