FFCP PHASE1:Hg19::chr14:75982215..75982255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:75982215..75982255,+ | |||
|coexpression_cluster_id=C810 | |||
|description=CAGE_peak_at_chr14:75982215..75982255,+ | |||
|id=chr14:75982215..75982255,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.74e-17!24;CL:0000826!7.74e-17!24;CL:0000542!4.14e-16!53;CL:0000051!4.14e-16!53;CL:0000838!1.68e-14!52;CL:0000738!7.42e-11!140;CL:0000988!1.86e-10!182;CL:0002087!2.80e-10!119;CL:0002031!1.16e-09!124;CL:0000990!1.23e-09!8;CL:0002032!3.57e-09!165;CL:0000837!3.57e-09!165;CL:0000037!1.51e-08!172;CL:0000566!1.51e-08!172;CL:0000785!2.16e-08!2;CL:0000955!2.16e-08!2;CL:0000818!2.16e-08!2;CL:0000954!2.16e-08!2;CL:0000816!2.16e-08!2;CL:0000451!8.01e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.41e-47;24!CL:0000542;6.08e-14;53!CL:0000946;3.33e-13;1!CL:0000786;3.33e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.30e-47,24;CL:0000826,4.30e-47,24;CL:0000838,1.08e-30,52;CL:0000542,4.35e-30,53;CL:0000051,4.35e-30,53;CL:0000988,7.17e-15,177;CL:0000946,3.33e-13,1;CL:0000786,3.33e-13,1;CL:0000980,3.33e-13,1;CL:0002087,6.55e-13,115;CL:0000738,1.18e-12,136;CL:0002031,2.61e-12,120;CL:0002032,2.00e-10,161;CL:0000837,2.00e-10,161;CL:0000037,6.42e-10,168;CL:0000785,3.09e-07,2;CL:0000955,3.09e-07,2;CL:0000818,3.09e-07,2;CL:0000954,3.09e-07,2;CL:0000816,3.09e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;6.08e-14;53!CL:0000954;3.09e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.79e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.79e-29;10!DOID:0060060;5.38e-13;1!DOID:0060061;5.38e-13;1!DOID:8691;5.38e-13;1!DOID:630;6.43e-13;1!DOID:0050177;6.43e-13;1!DOID:0050427;6.43e-13;1!DOID:2355;8.15e-13;1!DOID:4960;9.73e-13;1!DOID:0070004;9.73e-13;1!DOID:74;4.83e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.96e-29,10;DOID:0060060,5.38e-13,1;DOID:0060061,5.38e-13,1;DOID:8691,5.38e-13,1;DOID:630,6.06e-13,1;DOID:0050177,6.06e-13,1;DOID:0050427,6.06e-13,1;DOID:2355,7.68e-13,1;DOID:4960,9.73e-13,1;DOID:0070004,9.73e-13,1;DOID:2531,1.37e-10,51;DOID:0060083,1.37e-10,51;DOID:74,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.49e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.60e-11;10!UBERON:0002390;7.98e-09;32!UBERON:0000178;1.03e-07;15!UBERON:0000179;1.03e-07;15!UBERON:0000463;1.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.65e-11,10;UBERON:0000358,2.65e-11,10;UBERON:0000307,2.65e-11,10;UBERON:0000091,2.65e-11,10;UBERON:0000087,2.65e-11,10;UBERON:0007010,2.65e-11,10;UBERON:0007806,2.65e-11,10;UBERON:0008780,2.65e-11,10;UBERON:0005728,2.65e-11,10;UBERON:0000178,1.04e-07,15;UBERON:0000179,1.04e-07,15;UBERON:0000463,1.04e-07,15 | |||
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| ||
|short_description=p@chr14:75982215..75982255,+ | |||
}} | }} |
Latest revision as of 22:53, 24 July 2015
Short description: | p@chr14:75982215..75982255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75982215..75982255, + |
Coexpression cluster: | C810_b_cord_xeroderma_adult_plasma_splenic_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.30e-47 | 24 |
pro-B cell | 4.30e-47 | 24 |
lymphoid lineage restricted progenitor cell | 1.08e-30 | 52 |
lymphocyte | 4.35e-30 | 53 |
common lymphoid progenitor | 4.35e-30 | 53 |
hematopoietic cell | 7.17e-15 | 177 |
antibody secreting cell | 3.33e-13 | 1 |
plasma cell | 3.33e-13 | 1 |
plasmablast | 3.33e-13 | 1 |
nongranular leukocyte | 6.55e-13 | 115 |
leukocyte | 1.18e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 2.61e-12 | 120 |
hematopoietic oligopotent progenitor cell | 2.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.00e-10 | 161 |
hematopoietic stem cell | 6.42e-10 | 168 |
mature B cell | 3.09e-07 | 2 |
pre-B-II cell | 3.09e-07 | 2 |
transitional stage B cell | 3.09e-07 | 2 |
small pre-B-II cell | 3.09e-07 | 2 |
immature B cell | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.65e-11 | 10 |
blastocyst | 2.65e-11 | 10 |
blastula | 2.65e-11 | 10 |
bilaminar disc | 2.65e-11 | 10 |
inner cell mass | 2.65e-11 | 10 |
cleaving embryo | 2.65e-11 | 10 |
connecting stalk | 2.65e-11 | 10 |
inner cell mass derived epiblast | 2.65e-11 | 10 |
extraembryonic mesoderm | 2.65e-11 | 10 |
blood | 1.04e-07 | 15 |
haemolymphatic fluid | 1.04e-07 | 15 |
organism substance | 1.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.96e-29 | 10 |
non-Hodgkin lymphoma | 5.38e-13 | 1 |
cutaneous T cell lymphoma | 5.38e-13 | 1 |
mycosis fungoides | 5.38e-13 | 1 |
genetic disease | 6.06e-13 | 1 |
monogenic disease | 6.06e-13 | 1 |
xeroderma pigmentosum | 6.06e-13 | 1 |
anemia | 7.68e-13 | 1 |
bone marrow cancer | 9.73e-13 | 1 |
myeloma | 9.73e-13 | 1 |
hematologic cancer | 1.37e-10 | 51 |
immune system cancer | 1.37e-10 | 51 |
hematopoietic system disease | 4.69e-07 | 2 |