FFCP PHASE1:Hg19::chr15:35086988..35086997,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:35086988..35086997,- to FFCP PHASE1:Hg19::chr15:35086988..35086997,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=70 | |EntrezGene=70 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=143 | |HGNC=143 | ||
|TSSclassifier=strong | |||
|UniProt=P68032 | |UniProt=P68032 | ||
|association_with_transcript=11bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end | |||
|cluster_id=chr15:35086988..35086997,- | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_7_at_ACTC1_5end | |||
|id=chr15:35086988..35086997,- | |||
|ontology_enrichment_celltype=CL:0000188!7.25e-21!9;CL:0000515!1.41e-09!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.44e-18;1!UBERON:0010227;4.44e-18;1!UBERON:0000358;8.72e-18;1!UBERON:0004140;8.72e-18;1!UBERON:0005062;1.57e-17;4!UBERON:0007284;1.57e-17;4 | |||
|ontology_enrichment_disease=DOID:114!1.60e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.22e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!2.53e-09!2;UBERON:0002385!3.10e-09!63;UBERON:0001015!3.10e-09!63;UBERON:0000383!3.10e-09!63;UBERON:0007023!3.82e-09!115;UBERON:0007100!5.80e-09!27;UBERON:0001134!3.59e-08!61;UBERON:0002036!3.59e-08!61;UBERON:0003082!3.59e-08!61;UBERON:0004151!8.13e-07!3;UBERON:0004290!8.78e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.89e-32;25!UBERON:0004151;2.49e-23;3!UBERON:0003978;5.15e-23;3!UBERON:0000946;5.15e-23;3!UBERON:0000948;6.12e-19;22!UBERON:0002084;3.44e-18;1!UBERON:0002082;3.44e-18;1!UBERON:0002079;4.44e-18;1!UBERON:0002135;5.26e-18;1!UBERON:0002146;8.72e-18;1!UBERON:0005623;8.72e-18;1!UBERON:0002081;1.03e-09;2!UBERON:0002133;1.12e-09;2!UBERON:0010313;1.42e-07;10!UBERON:0003103;5.66e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.66e-30,27;UBERON:0004151,2.35e-23,3;UBERON:0003978,5.76e-23,3;UBERON:0009751,5.76e-23,3;UBERON:0000946,5.76e-23,3;UBERON:0002523,5.76e-23,3;UBERON:0005983,5.76e-23,3;UBERON:0002165,5.76e-23,3;UBERON:0002062,5.76e-23,3;UBERON:0007280,5.76e-23,3;UBERON:0002084,3.16e-18,1;UBERON:0002082,3.16e-18,1;UBERON:0010226,3.16e-18,1;UBERON:0002079,4.44e-18,1;UBERON:0002135,5.26e-18,1;UBERON:0002146,1.03e-17,1;UBERON:0005623,1.03e-17,1;UBERON:0000948,2.22e-17,24;UBERON:0005498,2.22e-17,24;UBERON:0004140,2.22e-17,24;UBERON:0009881,2.22e-17,24;UBERON:0004141,2.22e-17,24;UBERON:0003084,2.22e-17,24;UBERON:0007005,2.22e-17,24;UBERON:0004139,2.22e-17,24;UBERON:0004291,2.22e-17,24;UBERON:0003103,1.29e-11,68;UBERON:0004797,2.04e-10,7;UBERON:0002081,1.03e-09,2;UBERON:0010227,1.03e-09,2;UBERON:0002133,1.12e-09,2;UBERON:0010313,1.47e-07,10;UBERON:0002342,1.47e-07,10;UBERON:0005062,1.47e-07,10;UBERON:0001009,7.11e-07,112 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0.487185025805993,0,0,0,0,0.503760491138201,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.551346289938122,0,0.580066775656914,0.93749290157711,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02708322290058,2.06244381610515,0,0.798716001995964,3.86303443322914,8.25734392534928,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,7.86164859010704,8.60719561475061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6009439985472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.952257725854961,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0.487185025805993,0,0,0,0,0.503760491138201,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.551346289938122,0,0.580066775656914,0.93749290157711,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02708322290058,2.06244381610515,0,0.798716001995964,3.86303443322914,8.25734392534928,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,7.86164859010704,8.60719561475061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6009439985472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.952257725854961,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0.603821380773079,0 | ||
|short_description=p7@ACTC1 | |||
}} | }} |
Latest revision as of 07:30, 17 September 2015
Short description: | p7@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ACTC1_5end |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | 11bp_to_AB590199, CR541795, CU679551, DQ893096, DQ896369_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | P68032 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.66e-30 | 27 |
cardiac chamber | 2.35e-23 | 3 |
valve | 5.76e-23 | 3 |
cardiac mesenchyme | 5.76e-23 | 3 |
cardial valve | 5.76e-23 | 3 |
tunica intima | 5.76e-23 | 3 |
heart layer | 5.76e-23 | 3 |
endocardium | 5.76e-23 | 3 |
endocardial cushion | 5.76e-23 | 3 |
presumptive endocardium | 5.76e-23 | 3 |
heart left ventricle | 3.16e-18 | 1 |
cardiac ventricle | 3.16e-18 | 1 |
future cardiac ventricle | 3.16e-18 | 1 |
left cardiac atrium | 4.44e-18 | 1 |
mitral valve | 5.26e-18 | 1 |
pulmonary valve | 1.03e-17 | 1 |
semi-lunar valve | 1.03e-17 | 1 |
heart | 2.22e-17 | 24 |
primitive heart tube | 2.22e-17 | 24 |
primary heart field | 2.22e-17 | 24 |
anterior lateral plate mesoderm | 2.22e-17 | 24 |
heart tube | 2.22e-17 | 24 |
heart primordium | 2.22e-17 | 24 |
cardiac mesoderm | 2.22e-17 | 24 |
cardiogenic plate | 2.22e-17 | 24 |
heart rudiment | 2.22e-17 | 24 |
compound organ | 1.29e-11 | 68 |
blood vessel layer | 2.04e-10 | 7 |
cardiac atrium | 1.03e-09 | 2 |
future cardiac atrium | 1.03e-09 | 2 |
atrioventricular valve | 1.12e-09 | 2 |
neural crest-derived structure | 1.47e-07 | 10 |
neural crest | 1.47e-07 | 10 |
neural fold | 1.47e-07 | 10 |
circulatory system | 7.11e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.22e-09 | 2 |