FFCP PHASE1:Hg19::chr15:45021352..45021380,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:45021352..45021380,+ to FFCP PHASE1:Hg19::chr15:45021352..45021380,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000561237_5end | |||
|cluster_id=chr15:45021352..45021380,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_TRIM69_5end | |||
|id=chr15:45021352..45021380,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.81e-20!42;CL:0000860!1.23e-19!45;CL:0000766!1.58e-16!76;CL:0000557!7.30e-15!71;CL:0002009!8.70e-15!65;CL:0002194!6.43e-14!63;CL:0000576!6.43e-14!63;CL:0000040!6.43e-14!63;CL:0000559!6.43e-14!63;CL:0000738!1.25e-13!140;CL:0000839!1.81e-13!70;CL:0002031!3.50e-11!124;CL:0002087!1.56e-10!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.85e-16;33!CL:0002057;5.85e-16;33!CL:0000473;2.76e-14;39!CL:0000234;2.76e-14;39!CL:0000576;3.91e-13;48!CL:0000766;3.10e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.03e-23,48;CL:0000234,7.03e-23,48;CL:0000860,1.12e-22,42;CL:0002057,1.12e-22,42;CL:0000766,4.46e-21,72;CL:0002009,3.37e-19,61;CL:0000557,4.56e-19,67;CL:0002194,3.93e-18,59;CL:0000576,3.93e-18,59;CL:0000040,3.93e-18,59;CL:0000559,3.93e-18,59;CL:0000839,2.20e-17,66;CL:0000738,1.12e-14,136;CL:0002031,1.33e-11,120;CL:0002087,8.69e-11,115;CL:0000763,5.86e-10,108;CL:0000049,5.86e-10,108;CL:0002032,2.87e-07,161;CL:0000837,2.87e-07,161;CL:0000037,3.26e-07,168;CL:0000988,5.67e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-20!102;UBERON:0003061!1.21e-20!102;UBERON:0002193!3.37e-19!112;UBERON:0007023!6.25e-19!115;UBERON:0002371!8.18e-14!80;UBERON:0001474!4.51e-12!86;UBERON:0004765!3.80e-11!101;UBERON:0001434!3.80e-11!101;UBERON:0002405!2.61e-10!115;UBERON:0000178!1.25e-07!15;UBERON:0000179!1.25e-07!15;UBERON:0000463!1.25e-07!15;UBERON:0002204!1.59e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.63e-08;15!UBERON:0000179;1.63e-08;15!UBERON:0000463;1.63e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.14e-25,98;UBERON:0003061,1.14e-25,98;UBERON:0002193,7.76e-23,108;UBERON:0007023,1.28e-20,114;UBERON:0002371,1.10e-17,76;UBERON:0002405,2.08e-16,93;UBERON:0001474,1.69e-15,82;UBERON:0004765,7.39e-13,90;UBERON:0001434,1.66e-12,100;UBERON:0003081,2.03e-09,203;UBERON:0000178,2.46e-08,15;UBERON:0000179,2.46e-08,15;UBERON:0000463,2.46e-08,15;UBERON:0002204,3.26e-08,167 | |||
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| ||
|short_description=p2@TRIM69 | |||
}} | }} |
Latest revision as of 19:27, 17 September 2015
Short description: | p2@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM69_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 12bp_to_ENST00000561237_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.03e-23 | 48 |
phagocyte | 7.03e-23 | 48 |
classical monocyte | 1.12e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-22 | 42 |
myeloid leukocyte | 4.46e-21 | 72 |
macrophage dendritic cell progenitor | 3.37e-19 | 61 |
granulocyte monocyte progenitor cell | 4.56e-19 | 67 |
monopoietic cell | 3.93e-18 | 59 |
monocyte | 3.93e-18 | 59 |
monoblast | 3.93e-18 | 59 |
promonocyte | 3.93e-18 | 59 |
myeloid lineage restricted progenitor cell | 2.20e-17 | 66 |
leukocyte | 1.12e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.33e-11 | 120 |
nongranular leukocyte | 8.69e-11 | 115 |
myeloid cell | 5.86e-10 | 108 |
common myeloid progenitor | 5.86e-10 | 108 |
hematopoietic oligopotent progenitor cell | 2.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-07 | 161 |
hematopoietic stem cell | 3.26e-07 | 168 |
hematopoietic cell | 5.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.14e-25 | 98 |
blood island | 1.14e-25 | 98 |
hemolymphoid system | 7.76e-23 | 108 |
adult organism | 1.28e-20 | 114 |
bone marrow | 1.10e-17 | 76 |
immune system | 2.08e-16 | 93 |
bone element | 1.69e-15 | 82 |
skeletal element | 7.39e-13 | 90 |
skeletal system | 1.66e-12 | 100 |
lateral plate mesoderm | 2.03e-09 | 203 |
blood | 2.46e-08 | 15 |
haemolymphatic fluid | 2.46e-08 | 15 |
organism substance | 2.46e-08 | 15 |
musculoskeletal system | 3.26e-08 | 167 |