FFCP PHASE1:Hg19::chr16:28550348..28550365,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:28550348..28550365,- to FFCP PHASE1:Hg19::chr16:28550348..28550365,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26471 | |EntrezGene=26471 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29990 | |HGNC=29990 | ||
|TSSclassifier=strong | |||
|UniProt=O60356 | |UniProt=O60356 | ||
|association_with_transcript=88bp_to_ENST00000324873_5end | |||
|cluster_id=chr16:28550348..28550365,- | |||
|description=CAGE_peak_4_at_NUPR1_5end | |||
|id=chr16:28550348..28550365,- | |||
|ontology_enrichment_celltype=CL:0000055!7.88e-13!180;CL:0000057!7.81e-10!75;CL:0000220!1.38e-07!246;CL:0002321!2.22e-07!248;CL:0000680!7.10e-07!57;CL:0000056!7.10e-07!57;CL:0000355!7.10e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.56e-10,76;CL:0000680,2.54e-07,58;CL:0000056,2.54e-07,58;CL:0000355,2.54e-07,58;CL:0000187,8.93e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.29e-17!365;UBERON:0000481!1.19e-14!347;UBERON:0000468!1.44e-13!659;UBERON:0000467!2.78e-11!625;UBERON:0000480!4.92e-11!626;UBERON:0000062!3.63e-10!511;UBERON:0000119!6.43e-10!312;UBERON:0000483!8.76e-10!309;UBERON:0007023!1.07e-09!115;UBERON:0000477!1.35e-09!286;UBERON:0002100!4.12e-09!216;UBERON:0004111!3.72e-08!241;UBERON:0000914!4.92e-08!83;UBERON:0002329!4.92e-08!83;UBERON:0003077!4.92e-08!83;UBERON:0003059!4.92e-08!83;UBERON:0007282!4.92e-08!83;UBERON:0009618!4.92e-08!83;UBERON:0007285!4.92e-08!83;UBERON:0001048!6.55e-08!168;UBERON:0003104!2.31e-07!238;UBERON:0009142!2.31e-07!238;UBERON:0002050!4.03e-07!605;UBERON:0005423!4.03e-07!605;UBERON:0000922!4.96e-07!612;UBERON:0000923!5.09e-07!604;UBERON:0005291!5.09e-07!604;UBERON:0006598!5.09e-07!604;UBERON:0002532!5.09e-07!604;UBERON:0003102!7.51e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.00e-10,114;UBERON:0010314,1.88e-09,132;UBERON:0000119,6.59e-09,309;UBERON:0000483,6.82e-09,306;UBERON:0005256,1.46e-07,122;UBERON:0004111,1.71e-07,240;UBERON:0003104,1.76e-07,160;UBERON:0009142,1.76e-07,160;UBERON:0007524,2.06e-07,73;UBERON:0001048,2.10e-07,160;UBERON:0003077,2.84e-07,72;UBERON:0007285,2.84e-07,72;UBERON:0003102,4.09e-07,99;UBERON:0001134,5.16e-07,62;UBERON:0002036,5.16e-07,62;UBERON:0003082,5.16e-07,62;UBERON:0002329,5.39e-07,71;UBERON:0003059,5.39e-07,71;UBERON:0007282,5.39e-07,71;UBERON:0004290,5.39e-07,71;UBERON:0009618,5.39e-07,71;UBERON:0002100,6.43e-07,199;UBERON:0002385,6.75e-07,64;UBERON:0001015,6.75e-07,64;UBERON:0000383,6.75e-07,64;UBERON:0002530,7.85e-07,59 | |||
|phase1_expression=13.9892352038329,8.99222200342129,12.8268507727334,12.0087958023756,7.15137751083661,3.48935409640147,2.53299878168311,4.42203911398782,6.26845507679612,0.737201809504527,1.39560233594486,0,0,8.91117741312336,7.95353701746998,6.72325146451775,6.62963980826375,8.76372108464848,8.29485757943862,0.738726348460727,2.24400760368678,2.82109249330279,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,3.67768489791571,5.12050061923025,41.0426951285134,0,0,0,0,0,0,21.2719700527928,25.9114932815184,25.7575567634187,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,4.02420515822182,9.20610445273418,11.5660528763061,13.536123587169,18.9748939838679,11.9292892057665,15.0856809793817,0.189069634328136,0,0.263504357079378,9.8889202000773,26.9578513336481,14.8313777113772,0,0,0.398873881556595,0,0,0,1.98762407366705,3.4409383804245,0,1.13061588384802,1.67799774483962,0.550236083880135,0,4.90991842421725,7.1153252537342,9.0374565446461,1.61131726843659,2.28081631715554,4.63717909341522,0,0,0.267899184852239,1.34717623575702,0.450445921933289,0,0,0,0,0,21.3686085549842,9.93943903390637,12.663051166458,6.09082231740807,6.3104056564739,9.930714701554,8.97084160227691,8.5399196583764,13.0733800661095,7.78027588499416,9.0256150286691,7.68270944633256,12.4113090668844,7.49028701823999,39.3660005480778,15.2958437646857,16.543682824789,13.7492786107657,2.46612447151906,2.10434827678571,0.421352420106746,4.89970011011744,2.94802361548243,15.8088445198921,9.50402285825643,13.3524141810421,20.9337113245746,17.2468354035897,4.37673896280572,3.1279629967991,5.26421819419948,9.2185300384976,7.35570709917647,13.9721394783135,8.05368500436149,3.04962380671065,9.1829677191984,7.84148034290379,8.10245959427886,9.2747276314595,11.3361837620077,14.1448810812008,4.72573730275545,13.5437437174066,6.56327813034698,11.7823870262143,9.21382523867228,6.03516307278244,8.66468044757706,5.4259389539356,3.47869535693934,4.09119180886252,1.43402297694502,0.975789649036763,0.530119073285941,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,6.25798129319264,6.43240938192885,0,8.35862270457562,3.60939740834793,7.45332840251016,9.27215795429559,5.3022426574366,7.94116603673236,8.27941887551143,4.27087114399974,8.35954110593019,6.27908688401107,4.23221872641029,0,0,6.5851841813024,8.82052268313252,11.4079531339648,15.725235466842,10.0434284135839,0,2.7057456479485,1.02940686179115,8.45077197646417,19.1082980537953,10.0528972411631,10.2773174125968,41.3776547744112,7.27954349695705,0,0.463721619900307,3.52226082707465,6.20775725372617,12.5006088395685,8.37118269832232,0.790204397959275,0,9.1100292252337,2.80805118167085,3.86441021950693,16.8720901176199,5.87937448696008,5.67100388969546,32.9575363546482,18.6005720648936,13.8017764499476,0,0,0,0,0,0.825472625798197,6.49380323449072,1.17217447210047,8.55362230113526,0.514137463516618,2.40274446275134,2.00078502841405,2.69114602428866,19.1822430286643,0.95339771567235,8.79047667152889,17.8828222925941,2.535908257668,20.477234977035,22.8816361205005,2.57207374262142,0,0.799266537048298,11.0093055116774,14.650783345569,3.29296134712308,4.56030658011229,11.727934308504,0.791951872933429,16.8806051153368,22.6598699236076,9.49743416229542,13.378615870531,6.52934218861764,8.43335757932127,18.6907387283434,24.1210065251639,2.85273810081437,11.2929419200712,10.2738161275192,7.87868238255541,0,0,0,0,2.28685161800217,1.30139853857622,0,0.502548796003046,0,0,0,0,9.93801082925033,3.50119364741774,15.1908413271852,10.6065139380712,14.4527480925701,14.9817294282238,9.01988895443892,9.63027519128701,9.09630016223939,8.27784570340039,7.3064815838898,6.63729006750131,8.08017614553171,8.2236486134351,8.5785855952714,0,0,0,0,0,1.5119514666484,14.8864684691266,6.29194090481056,13.4716845327875,10.2511319404561,15.3512174720011,12.0640440857706,5.93672265779964,4.1636617326717,7.45759246315134,5.91315523299426,10.3850885836724,5.92672930145792,1.0877350463246,7.01772646061497,21.0865464663203,15.2703216058927,16.752387456618,14.4236856455367,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,1.66215201785745,0,0,0,0,0.656029291399411,10.4121086292577,11.3345112812494,0.824125183365091,0.82509499920588,20.6735593678622,22.1020483652417,19.2820715812991,12.9538762511443,4.1593126620954,4.91211759123615,2.20538515975249,7.62683738564743,4.78555089916954,4.09087811597284,5.16385806751077,25.4538769655906,26.1378491616544,2.04180339991335,43.1943724253198,28.8204240564317,8.81474571125792,8.3644472419272,11.3972424665153,7.98459045475533,3.47973196830029,10.1928320507156,7.44249411058354,8.93180086463202,3.79655309662471,8.00646814480064,11.51540060901,12.8381696410176,6.0458617105928,6.27958912159384,9.1734953367490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|phase1_expression=13.9892352038329,8.99222200342129,12.8268507727334,12.0087958023756,7.15137751083661,3.48935409640147,2.53299878168311,4.42203911398782,6.26845507679612,0.737201809504527,1.39560233594486,0,0,8.91117741312336,7.95353701746998,6.72325146451775,6.62963980826375,8.76372108464848,8.29485757943862,0.738726348460727,2.24400760368678,2.82109249330279,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,3.67768489791571,5.12050061923025,41.0426951285134,0,0,0,0,0,0,21.2719700527928,25.9114932815184,25.7575567634187,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,4.02420515822182,9.20610445273418,11.5660528763061,13.536123587169,18.9748939838679,11.9292892057665,15.0856809793817,0.189069634328136,0,0.263504357079378,9.8889202000773,26.9578513336481,14.8313777113772,0,0,0.398873881556595,0,0,0,1.98762407366705,3.4409383804245,0,1.13061588384802,1.67799774483962,0.550236083880135,0,4.90991842421725,7.1153252537342,9.0374565446461,1.61131726843659,2.28081631715554,4.63717909341522,0,0,0.267899184852239,1.34717623575702,0.450445921933289,0,0,0,0,0,21.3686085549842,9.93943903390637,12.663051166458,6.09082231740807,6.3104056564739,9.930714701554,8.97084160227691,8.5399196583764,13.0733800661095,7.78027588499416,9.0256150286691,7.68270944633256,12.4113090668844,7.49028701823999,39.3660005480778,15.2958437646857,16.543682824789,13.7492786107657,2.46612447151906,2.10434827678571,0.421352420106746,4.89970011011744,2.94802361548243,15.8088445198921,9.50402285825643,13.3524141810421,20.9337113245746,17.2468354035897,4.37673896280572,3.1279629967991,5.26421819419948,9.2185300384976,7.35570709917647,13.9721394783135,8.05368500436149,3.04962380671065,9.1829677191984,7.84148034290379,8.10245959427886,9.2747276314595,11.3361837620077,14.1448810812008,4.72573730275545,13.5437437174066,6.56327813034698,11.7823870262143,9.21382523867228,6.03516307278244,8.66468044757706,5.4259389539356,3.47869535693934,4.09119180886252,1.43402297694502,0.975789649036763,0.530119073285941,0.464775771478074,0.310983165046111,0.252320850875628,0.72995471815166,6.25798129319264,6.43240938192885,0,8.35862270457562,3.60939740834793,7.45332840251016,9.27215795429559,5.3022426574366,7.94116603673236,8.27941887551143,4.27087114399974,8.35954110593019,6.27908688401107,4.23221872641029,0,0,6.5851841813024,8.82052268313252,11.4079531339648,15.725235466842,10.0434284135839,0,2.7057456479485,1.02940686179115,8.45077197646417,19.1082980537953,10.0528972411631,10.2773174125968,41.3776547744112,7.27954349695705,0,0.463721619900307,3.52226082707465,6.20775725372617,12.5006088395685,8.37118269832232,0.790204397959275,0,9.1100292252337,2.80805118167085,3.86441021950693,16.8720901176199,5.87937448696008,5.67100388969546,32.9575363546482,18.6005720648936,13.8017764499476,0,0,0,0,0,0.825472625798197,6.49380323449072,1.17217447210047,8.55362230113526,0.514137463516618,2.40274446275134,2.00078502841405,2.69114602428866,19.1822430286643,0.95339771567235,8.79047667152889,17.8828222925941,2.535908257668,20.477234977035,22.8816361205005,2.57207374262142,0,0.799266537048298,11.0093055116774,14.650783345569,3.29296134712308,4.56030658011229,11.727934308504,0.791951872933429,16.8806051153368,22.6598699236076,9.49743416229542,13.378615870531,6.52934218861764,8.43335757932127,18.6907387283434,24.1210065251639,2.85273810081437,11.2929419200712,10.2738161275192,7.87868238255541,0,0,0,0,2.28685161800217,1.30139853857622,0,0.502548796003046,0,0,0,0,9.93801082925033,3.50119364741774,15.1908413271852,10.6065139380712,14.4527480925701,14.9817294282238,9.01988895443892,9.63027519128701,9.09630016223939,8.27784570340039,7.3064815838898,6.63729006750131,8.08017614553171,8.2236486134351,8.5785855952714,0,0,0,0,0,1.5119514666484,14.8864684691266,6.29194090481056,13.4716845327875,10.2511319404561,15.3512174720011,12.0640440857706,5.93672265779964,4.1636617326717,7.45759246315134,5.91315523299426,10.3850885836724,5.92672930145792,1.0877350463246,7.01772646061497,21.0865464663203,15.2703216058927,16.752387456618,14.4236856455367,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,1.66215201785745,0,0,0,0,0.656029291399411,10.4121086292577,11.3345112812494,0.824125183365091,0.82509499920588,20.6735593678622,22.1020483652417,19.2820715812991,12.9538762511443,4.1593126620954,4.91211759123615,2.20538515975249,7.62683738564743,4.78555089916954,4.09087811597284,5.16385806751077,25.4538769655906,26.1378491616544,2.04180339991335,43.1943724253198,28.8204240564317,8.81474571125792,8.3644472419272,11.3972424665153,7.98459045475533,3.47973196830029,10.1928320507156,7.44249411058354,8.93180086463202,3.79655309662471,8.00646814480064,11.51540060901,12.8381696410176,6.0458617105928,6.27958912159384,9.1734953367490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| ||
|short_description=p4@NUPR1 | |||
}} | }} |
Latest revision as of 00:13, 16 September 2015
Short description: | p4@NUPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NUPR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 88bp_to_ENST00000324873_5end |
EntrezGene: | NUPR1 |
HGNC: | 29990 |
UniProt: | O60356 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.56e-10 | 76 |
muscle precursor cell | 2.54e-07 | 58 |
myoblast | 2.54e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.54e-07 | 58 |
muscle cell | 8.93e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.00e-10 | 114 |
structure with developmental contribution from neural crest | 1.88e-09 | 132 |
cell layer | 6.59e-09 | 309 |
epithelium | 6.82e-09 | 306 |
trunk mesenchyme | 1.46e-07 | 122 |
anatomical conduit | 1.71e-07 | 240 |
mesenchyme | 1.76e-07 | 160 |
entire embryonic mesenchyme | 1.76e-07 | 160 |
dense mesenchyme tissue | 2.06e-07 | 73 |
primordium | 2.10e-07 | 160 |
paraxial mesoderm | 2.84e-07 | 72 |
presumptive paraxial mesoderm | 2.84e-07 | 72 |
surface structure | 4.09e-07 | 99 |
skeletal muscle tissue | 5.16e-07 | 62 |
striated muscle tissue | 5.16e-07 | 62 |
myotome | 5.16e-07 | 62 |
somite | 5.39e-07 | 71 |
presomitic mesoderm | 5.39e-07 | 71 |
presumptive segmental plate | 5.39e-07 | 71 |
dermomyotome | 5.39e-07 | 71 |
trunk paraxial mesoderm | 5.39e-07 | 71 |
trunk | 6.43e-07 | 199 |
muscle tissue | 6.75e-07 | 64 |
musculature | 6.75e-07 | 64 |
musculature of body | 6.75e-07 | 64 |
gland | 7.85e-07 | 59 |