FFCP PHASE1:Hg19::chr17:29290132..29290136,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:29290132..29290136,+ to FFCP PHASE1:Hg19::chr17:29290132..29290136,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:29290132..29290136,+ | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_at_chr17:29290132..29290136,+ | |||
|id=chr17:29290132..29290136,+ | |||
|ontology_enrichment_celltype=CL:0002194!6.09e-25!63;CL:0000576!6.09e-25!63;CL:0000040!6.09e-25!63;CL:0000559!6.09e-25!63;CL:0002009!9.66e-24!65;CL:0000839!4.71e-21!70;CL:0000766!1.15e-20!76;CL:0000557!1.45e-20!71;CL:0002057!1.58e-18!42;CL:0000860!1.22e-16!45;CL:0002087!1.10e-12!119;CL:0000763!1.39e-12!112;CL:0000049!1.39e-12!112;CL:0000738!8.34e-12!140;CL:0002031!4.20e-10!124;CL:0002393!1.02e-09!9;CL:0002397!1.02e-09!9;CL:0000037!1.87e-07!172;CL:0000566!1.87e-07!172;CL:0002032!3.00e-07!165;CL:0000837!3.00e-07!165;CL:0000988!9.38e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.49e-41;6!CL:0002619;1.00e-29;3!CL:0002393;1.27e-14;6!CL:0002397;1.27e-14;6!CL:0000766;7.33e-12;69!CL:0000576;9.92e-11;48!CL:0000473;5.85e-07;39!CL:0000234;5.85e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,8.51e-41,6;CL:0002619,1.00e-29,3;CL:0002194,4.12e-29,59;CL:0000576,4.12e-29,59;CL:0000040,4.12e-29,59;CL:0000559,4.12e-29,59;CL:0002009,4.20e-28,61;CL:0000839,7.63e-26,66;CL:0000557,1.97e-25,67;CL:0000766,1.53e-23,72;CL:0000473,1.68e-18,48;CL:0000234,1.68e-18,48;CL:0002393,7.72e-17,9;CL:0002397,7.72e-17,9;CL:0002087,3.51e-16,115;CL:0000763,4.97e-15,108;CL:0000049,4.97e-15,108;CL:0000738,2.49e-13,136;CL:0002031,2.58e-13,120;CL:0000037,2.43e-10,168;CL:0000988,1.08e-09,177;CL:0002032,2.31e-09,161;CL:0000837,2.31e-09,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-21!115;UBERON:0002371!6.24e-18!80;UBERON:0002390!2.60e-17!102;UBERON:0003061!2.60e-17!102;UBERON:0001474!1.47e-16!86;UBERON:0002193!4.08e-16!112;UBERON:0002405!3.54e-14!115;UBERON:0004765!3.91e-12!101;UBERON:0001434!3.91e-12!101;UBERON:0000062!9.56e-10!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.05e-10;1!UBERON:0002134;1.05e-10;1!UBERON:0005208;1.05e-10;1!UBERON:0004145;1.05e-10;1!UBERON:0005946;1.05e-10;1!UBERON:0005965;1.05e-10;1!UBERON:0002078;1.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.33e-22,76;UBERON:0002405,1.40e-20,93;UBERON:0001474,1.94e-20,82;UBERON:0002193,5.92e-20,108;UBERON:0002390,2.27e-19,98;UBERON:0003061,2.27e-19,98;UBERON:0004765,1.90e-18,90;UBERON:0001434,2.13e-16,100;UBERON:0000029,7.46e-11,1;UBERON:0002134,8.22e-11,1;UBERON:0005208,8.22e-11,1;UBERON:0005946,8.22e-11,1;UBERON:0005965,8.22e-11,1;UBERON:0002078,8.22e-11,1;UBERON:0002204,1.99e-10,167;UBERON:0003081,1.86e-09,203 | |||
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| ||
|short_description=p@chr17:29290132..29290136,+ | |||
}} | }} |
Latest revision as of 15:18, 25 July 2015
Short description: | p@chr17:29290132..29290136, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:29290132..29290136, + |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 8.51e-41 | 6 |
adult endothelial progenitor cell | 1.00e-29 | 3 |
monopoietic cell | 4.12e-29 | 59 |
monocyte | 4.12e-29 | 59 |
monoblast | 4.12e-29 | 59 |
promonocyte | 4.12e-29 | 59 |
macrophage dendritic cell progenitor | 4.20e-28 | 61 |
myeloid lineage restricted progenitor cell | 7.63e-26 | 66 |
granulocyte monocyte progenitor cell | 1.97e-25 | 67 |
myeloid leukocyte | 1.53e-23 | 72 |
defensive cell | 1.68e-18 | 48 |
phagocyte | 1.68e-18 | 48 |
intermediate monocyte | 7.72e-17 | 9 |
CD14-positive, CD16-positive monocyte | 7.72e-17 | 9 |
nongranular leukocyte | 3.51e-16 | 115 |
myeloid cell | 4.97e-15 | 108 |
common myeloid progenitor | 4.97e-15 | 108 |
leukocyte | 2.49e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.58e-13 | 120 |
hematopoietic stem cell | 2.43e-10 | 168 |
hematopoietic cell | 1.08e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.31e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.33e-22 | 76 |
immune system | 1.40e-20 | 93 |
bone element | 1.94e-20 | 82 |
hemolymphoid system | 5.92e-20 | 108 |
hematopoietic system | 2.27e-19 | 98 |
blood island | 2.27e-19 | 98 |
skeletal element | 1.90e-18 | 90 |
skeletal system | 2.13e-16 | 100 |
lymph node | 7.46e-11 | 1 |
tricuspid valve | 8.22e-11 | 1 |
right atrium valve | 8.22e-11 | 1 |
outflow tract of atrium | 8.22e-11 | 1 |
outflow part of right atrium | 8.22e-11 | 1 |
right cardiac atrium | 8.22e-11 | 1 |
musculoskeletal system | 1.99e-10 | 167 |
lateral plate mesoderm | 1.86e-09 | 203 |